RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 CCL19Q99731 98 aa4.94□□□□□ -1.62
FXN-205ENST00000498653 MAP3K3Q99759 626 aa4.94□□□□□ -1.62
FXN-205ENST00000498653 GORASP1Q9BQQ3 440 aa4.94□□□□□ -1.62
FXN-205ENST00000498653 APOOQ9BUR5 198 aa4.94□□□□□ -1.62
FXN-205ENST00000498653 MLPHQ9BV36 600 aaPredicted RBP4.94□□□□□ -1.62
FXN-205ENST00000498653 ZNF747Q9BV97 191 aa4.94□□□□□ -1.62
FXN-205ENST00000498653 TDRD1Q9BXT4 1180 aaKnown RBP4.94□□□□□ -1.62
FXN-205ENST00000498653 ADGRE3Q9BY15 652 aa4.94□□□□□ -1.62
FXN-205ENST00000498653 FRMD8Q9BZ67 464 aaPredicted RBP4.94□□□□□ -1.62
FXN-205ENST00000498653 FAM129AQ9BZQ8 928 aa4.94□□□□□ -1.62
FXN-205ENST00000498653 XAB2Q9HCS7 855 aaKnown RBP4.94□□□□□ -1.62
FXN-205ENST00000498653 GRHL1Q9NZI5 618 aa4.94□□□□□ -1.62
FXN-205ENST00000498653 MTRF1LQ9UGC7 380 aaKnown RBP4.94□□□□□ -1.62
FXN-205ENST00000498653 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.94□□□□□ -1.62
FXN-205ENST00000498653 ADAM30Q9UKF2 790 aa4.94□□□□□ -1.62
FXN-205ENST00000498653 RPL26L1Q9UNX3 145 aaKnown RBP4.94□□□□□ -1.62
FXN-205ENST00000498653 SHOC2Q9UQ13 582 aa4.94□□□□□ -1.62
FXN-205ENST00000498653 CHKBQ9Y259 395 aa4.94□□□□□ -1.62
FXN-205ENST00000498653 DNAJC16Q9Y2G8 782 aa4.94□□□□□ -1.62
FXN-205ENST00000498653 V9GYY5 206 aaPredicted RBP4.94□□□□□ -1.62
FXN-205ENST00000498653 LOC285095A0A1B0GVY8 99 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 TCRBV7S3A2A0A539 114 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 TSPAN11A1L157 253 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 C16orf96A6NNT2 1141 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 GOLGA8MH3BSY2 632 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 TRAFD1O14545 582 aaPredicted RBP4.93□□□□□ -1.62
FXN-205ENST00000498653 RASGRF2O14827 1237 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 PGLSO95336 258 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 PRLP01236 227 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 TUBBP07437 444 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 PDHA1P08559 390 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 CYP2A6P11509 494 aaPredicted RBP4.93□□□□□ -1.62
FXN-205ENST00000498653 MLNP12872 115 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 IGFBP5P24593 272 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 NPY2RP49146 381 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 CARSP49589 748 aaKnown RBP4.93□□□□□ -1.62
FXN-205ENST00000498653 PPM1FP49593 454 aaPredicted RBP4.93□□□□□ -1.62
FXN-205ENST00000498653 SUOXP51687 545 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 SESN2P58004 480 aaPredicted RBP4.93□□□□□ -1.62
FXN-205ENST00000498653 KIAA1024LP59773 190 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 POLR2LP62875 67 aaKnown RBP4.93□□□□□ -1.62
FXN-205ENST00000498653 CDH17Q12864 832 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 TUBB3Q13509 450 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 GALNT3Q14435 633 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 IHHQ14623 411 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 SLC1A5Q15758 541 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 BBS9Q3SYG4 887 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 AWAT1Q58HT5 328 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 SIRPB2Q5JXA9 342 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 PRAMEF13Q5VWM6 474 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 ANKRD22Q5VYY1 191 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 FBXO42Q6P3S6 717 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 LRRC8BQ6P9F7 803 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 BRAT1Q6PJG6 821 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 CCBE1Q6UXH8 406 aaPredicted RBP4.93□□□□□ -1.62
FXN-205ENST00000498653 RANBP10Q6VN20 620 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 USP45Q70EL2 814 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 C1QL4Q86Z23 238 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 LIX1LQ8IVB5 337 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 SIAH3Q8IW03 269 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 LGI4Q8N135 537 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 PDIK1LQ8N165 341 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 EIF1ADQ8N9N8 165 aaKnown RBP4.93□□□□□ -1.62
FXN-205ENST00000498653 OR52K1Q8NGK4 314 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 SLC37A2Q8TED4 501 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 ZFAND2BQ8WV99 257 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 PIH1D2Q8WWB5 315 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 IGFBPL1Q8WX77 278 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 ECHDC3Q96DC8 303 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 LRFN5Q96NI6 719 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 TRIB3Q96RU7 358 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 SRPK1Q96SB4 655 aaKnown RBP4.93□□□□□ -1.62
FXN-205ENST00000498653 APOL2Q9BQE5 337 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 TGIF2Q9GZN2 237 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 TSPYL1Q9H0U9 437 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 ANKZF1Q9H8Y5 726 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 ARNT2Q9HBZ2 717 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 SLC6A20Q9NP91 592 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 BFARQ9NZS9 450 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 OGFRQ9NZT2 677 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.93□□□□□ -1.62
FXN-205ENST00000498653 DNAH7Q8WXX0 4024 aa4.93□□□□□ -1.62
FXN-205ENST00000498653 DNAJC13O75165 2243 aa4.92□□□□□ -1.62
FXN-205ENST00000498653 A0A0J9YYE9 177 aa4.92□□□□□ -1.62
FXN-205ENST00000498653 C17orf113A0A1B0GUU1 675 aa4.92□□□□□ -1.62
FXN-205ENST00000498653 SDR42E2A6NKP2 422 aa4.92□□□□□ -1.62
FXN-205ENST00000498653 ANKRD66B4E2M5 251 aa4.92□□□□□ -1.62
FXN-205ENST00000498653 PEX12O00623 359 aa4.92□□□□□ -1.62
FXN-205ENST00000498653 NEMP1O14524 444 aa4.92□□□□□ -1.62
FXN-205ENST00000498653 PRRG2O14669 202 aa4.92□□□□□ -1.62
FXN-205ENST00000498653 EIF3HO15372 352 aaKnown RBP eCLIP4.92□□□□□ -1.62
FXN-205ENST00000498653 TOX3O15405 576 aaPredicted RBP4.92□□□□□ -1.62
FXN-205ENST00000498653 GPRIN2O60269 458 aa4.92□□□□□ -1.62
FXN-205ENST00000498653 GOSR1O95249 250 aa4.92□□□□□ -1.62
FXN-205ENST00000498653 CRTAMO95727 393 aa4.92□□□□□ -1.62
FXN-205ENST00000498653 TRBC1P01850 177 aa4.92□□□□□ -1.62
FXN-205ENST00000498653 SP1P08047 785 aa4.92□□□□□ -1.62
FXN-205ENST00000498653 FOLR1P15328 257 aa4.92□□□□□ -1.62
FXN-205ENST00000498653 PAX1P15863 534 aa4.92□□□□□ -1.62
FXN-205ENST00000498653 TPH1P17752 444 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms