RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 CAMKVQ8NCB2 501 aa14.93□□□□□ -0.02
HDAC4-213ENST00000496347 CLEC18CQ8NCF0 446 aa14.93□□□□□ -0.02
HDAC4-213ENST00000496347 VPS39Q96JC1 886 aa14.93□□□□□ -0.02
HDAC4-213ENST00000496347 AGAP4Q96P64 663 aa14.93□□□□□ -0.02
HDAC4-213ENST00000496347 MCMBPQ9BTE3 642 aa14.93□□□□□ -0.02
HDAC4-213ENST00000496347 SARGQ9BW04 601 aa14.93□□□□□ -0.02
HDAC4-213ENST00000496347 SLC29A3Q9BZD2 475 aa14.93□□□□□ -0.02
HDAC4-213ENST00000496347 LHPPQ9H008 270 aa14.93□□□□□ -0.02
HDAC4-213ENST00000496347 VPS4AQ9UN37 437 aa14.93□□□□□ -0.02
HDAC4-213ENST00000496347 DOPEY1Q5JWR5 2465 aa14.92□□□□□ -0.02
HDAC4-213ENST00000496347 A0A0A6YYC8 382 aaPredicted RBP14.92□□□□□ -0.02
HDAC4-213ENST00000496347 I3L1I5 382 aaPredicted RBP14.92□□□□□ -0.02
HDAC4-213ENST00000496347 RAD51CO43502 376 aa14.92□□□□□ -0.02
HDAC4-213ENST00000496347 ALOX12BO75342 701 aa14.92□□□□□ -0.02
HDAC4-213ENST00000496347 NPPBP16860 134 aa14.92□□□□□ -0.02
HDAC4-213ENST00000496347 CASQ1P31415 396 aa14.92□□□□□ -0.02
HDAC4-213ENST00000496347 BCL6P41182 706 aa14.92□□□□□ -0.02
HDAC4-213ENST00000496347 CCR8P51685 355 aa14.92□□□□□ -0.02
HDAC4-213ENST00000496347 CDKL1Q00532 357 aa14.92□□□□□ -0.02
HDAC4-213ENST00000496347 C2orf54Q08AI8 447 aa14.92□□□□□ -0.02
HDAC4-213ENST00000496347 VWA2Q5GFL6 755 aa14.92□□□□□ -0.02
HDAC4-213ENST00000496347 ATG9BQ674R7 924 aa14.92□□□□□ -0.02
HDAC4-213ENST00000496347 ADAMTSL2Q86TH1 951 aa14.92□□□□□ -0.02
HDAC4-213ENST00000496347 ASPGQ86U10 573 aa14.92□□□□□ -0.02
HDAC4-213ENST00000496347 ZC3H7AQ8IWR0 971 aaKnown RBP14.92□□□□□ -0.02
HDAC4-213ENST00000496347 PRSS58Q8IYP2 241 aa14.92□□□□□ -0.02
HDAC4-213ENST00000496347 ZADH2Q8N4Q0 377 aa14.92□□□□□ -0.02
HDAC4-213ENST00000496347 TBC1D19Q8N5T2 526 aa14.92□□□□□ -0.02
HDAC4-213ENST00000496347 PPP4R1Q8TF05 950 aa14.92□□□□□ -0.02
HDAC4-213ENST00000496347 PYROXD1Q8WU10 500 aa14.92□□□□□ -0.02
HDAC4-213ENST00000496347 CDKL2Q92772 493 aa14.92□□□□□ -0.02
HDAC4-213ENST00000496347 WDR77Q9BQA1 342 aaPredicted RBP14.92□□□□□ -0.02
HDAC4-213ENST00000496347 MFRPQ9BY79 579 aa14.92□□□□□ -0.02
HDAC4-213ENST00000496347 ILKAPQ9H0C8 392 aaPredicted RBP14.92□□□□□ -0.02
HDAC4-213ENST00000496347 RAB17Q9H0T7 212 aa14.92□□□□□ -0.02
HDAC4-213ENST00000496347 RIC8BQ9NVN3 520 aa14.92□□□□□ -0.02
HDAC4-213ENST00000496347 UTP11Q9Y3A2 253 aaKnown RBP14.92□□□□□ -0.02
HDAC4-213ENST00000496347 MASP2O00187 686 aa14.91□□□□□ -0.02
HDAC4-213ENST00000496347 COX6A1P12074 109 aa14.91□□□□□ -0.02
HDAC4-213ENST00000496347 CXCR2P25025 360 aa14.91□□□□□ -0.02
HDAC4-213ENST00000496347 EMP2P54851 167 aa14.91□□□□□ -0.02
HDAC4-213ENST00000496347 AP2B1P63010 937 aa14.91□□□□□ -0.02
HDAC4-213ENST00000496347 SKP1P63208 163 aa14.91□□□□□ -0.02
HDAC4-213ENST00000496347 CAV1Q03135 178 aa14.91□□□□□ -0.02
HDAC4-213ENST00000496347 INPP5JQ15735 1006 aaPredicted RBP14.91□□□□□ -0.02
HDAC4-213ENST00000496347 IGFL2Q6UWQ7 119 aa14.91□□□□□ -0.02
HDAC4-213ENST00000496347 Q6ZS92 163 aa14.91□□□□□ -0.02
HDAC4-213ENST00000496347 NDUFAF7Q7L592 441 aa14.91□□□□□ -0.02
HDAC4-213ENST00000496347 ZNF572Q7Z3I7 529 aaPredicted RBP14.91□□□□□ -0.02
HDAC4-213ENST00000496347 FAM26EQ8N5C1 309 aa14.91□□□□□ -0.02
HDAC4-213ENST00000496347 MFSD9Q8NBP5 474 aa14.91□□□□□ -0.02
HDAC4-213ENST00000496347 ALKBH8Q96BT7 664 aaKnown RBP14.91□□□□□ -0.02
HDAC4-213ENST00000496347 DPH5Q9H2P9 285 aa14.91□□□□□ -0.02
HDAC4-213ENST00000496347 EPS8L2Q9H6S3 715 aa14.91□□□□□ -0.02
HDAC4-213ENST00000496347 GRHL1Q9NZI5 618 aa14.91□□□□□ -0.02
HDAC4-213ENST00000496347 LUZP4Q9P127 313 aa14.91□□□□□ -0.02
HDAC4-213ENST00000496347 TXNDC16Q9P2K2 825 aa14.91□□□□□ -0.02
HDAC4-213ENST00000496347 POLEQ07864 2286 aa14.91□□□□□ -0.02
HDAC4-213ENST00000496347 LOC102723996A0A087X1L8 192 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 NSG1A0A0A6YYJ2 146 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 TCRBV9S1A1TA0A576 114 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 TRBC2A0A5B9 178 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 NPEPPSL1A6NEC2 478 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 GUCA1CO95843 209 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 HEXBP07686 556 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 GSTA2P09210 222 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 SAT1P21673 171 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 HNMTP50135 292 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 PGGT1BP53609 377 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 SLC12A2P55011 1212 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 TAS2R39P59534 338 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 POU4F1Q01851 419 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 HERC3Q15034 1050 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 ZXDCQ2QGD7 858 aaPredicted RBP14.9□□□□□ -0.02
HDAC4-213ENST00000496347 PRR30Q53SZ7 412 aaPredicted RBP14.9□□□□□ -0.02
HDAC4-213ENST00000496347 NIPAL1Q6NVV3 410 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 TMEM207Q6UWW9 146 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 RIPOR1Q6ZS17 1223 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 CYS1Q717R9 158 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 KBTBD2Q8IY47 623 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 OR4K1Q8NGD4 311 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 OR9A4Q8NGU2 314 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 SLC5A11Q8WWX8 675 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 PYCR2Q96C36 320 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 TM4SF19Q96DZ7 209 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 TSPAN17Q96FV3 270 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 OR4K3Q96R72 315 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 CPNE1Q99829 537 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 YIPF2Q9BWQ6 316 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 ZNF160Q9HCG1 818 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 ANKHQ9HCJ1 492 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 GPAMQ9HCL2 828 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 SAYSD1Q9NPB0 183 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 IKZF3Q9UKT9 509 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 MRPS2Q9Y399 296 aaKnown RBP14.9□□□□□ -0.02
HDAC4-213ENST00000496347 OARD1Q9Y530 152 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 PCDHGA10Q9Y5H3 936 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 SLC22A7Q9Y694 548 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 SCN2AQ99250 2005 aa14.9□□□□□ -0.02
HDAC4-213ENST00000496347 SCN3AQ9NY46 2000 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms