RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	MKS1	Q9NXB0	559 aa		11.38	□□□□□ -0.59
APTX-233	ENST00000496030	RARRES3	Q9UL19	164 aa		11.38	□□□□□ -0.59
APTX-233	ENST00000496030	KCNE2	Q9Y6J6	123 aa		11.38	□□□□□ -0.59
APTX-233	ENST00000496030	ITPR2	Q14571	2701 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	KCNE1B	A0A087WTH5	132 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030		A0A0J9YVX5	310 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030		A8MT66	165 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	11.37	□□□□□ -0.59
APTX-233	ENST00000496030		E7EQ34	232 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030		H0YGG7	62 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	STX16-NPEPL1	H3BU86	382 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030		K7EPI3	171 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	COPE	O14579	308 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	STX16	O14662	325 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	TYROBP	O43914	113 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	GLRA3	O75311	464 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	WFS1	O76024	890 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	DLGAP3	O95886	979 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	S100B	P04271	92 aa	Predicted RBP	11.37	□□□□□ -0.59
APTX-233	ENST00000496030	GFAP	P14136	432 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	EZR	P15311	586 aa	Known RBP	11.37	□□□□□ -0.59
APTX-233	ENST00000496030	CD22	P20273	847 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	VARS	P26640	1264 aa	Known RBP	11.37	□□□□□ -0.59
APTX-233	ENST00000496030	CCT5	P48643	541 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	ARF3	P61204	181 aa	Predicted RBP	11.37	□□□□□ -0.59
APTX-233	ENST00000496030	SNRPN	P63162	240 aa	Known RBP	11.37	□□□□□ -0.59
APTX-233	ENST00000496030	MEF2A	Q02078	507 aa	Predicted RBP	11.37	□□□□□ -0.59
APTX-233	ENST00000496030	CDC16	Q13042	620 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	NAA25	Q14CX7	972 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	PDK4	Q16654	411 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	ZC3H12B	Q5HYM0	836 aa	Known RBP	11.37	□□□□□ -0.59
APTX-233	ENST00000496030	LRRC70	Q7Z2Q7	622 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	VN1R4	Q7Z5H5	301 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	EXOC3L1	Q86VI1	746 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	ZFAND4	Q86XD8	727 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	PPP1R3B	Q86XI6	285 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	DTX1	Q86Y01	620 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	ARHGEF39	Q8N4T4	335 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	EXTL1	Q92935	676 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	PHF21B	Q96EK2	531 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	WDR34	Q96EX3	536 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	TEFM	Q96QE5	360 aa	Known RBP	11.37	□□□□□ -0.59
APTX-233	ENST00000496030	ZFYVE21	Q9BQ24	234 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	ZPBP	Q9BS86	351 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	C1QTNF3	Q9BXJ4	246 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	PELI2	Q9HAT8	420 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	SERTAD3	Q9UJW9	196 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	GRID1	Q9ULK0	1009 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	TMCO1	Q9UM00	188 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	PLLP	Q9Y342	182 aa		11.37	□□□□□ -0.59
APTX-233	ENST00000496030	TMEM184B	Q9Y519	407 aa	Predicted RBP	11.37	□□□□□ -0.59
APTX-233	ENST00000496030	ICE1	Q9Y2F5	2266 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	FEZF1	A0PJY2	475 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	FITM1	A5D6W6	292 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	E2F3	O00716	465 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	RGS16	O15492	202 aa	Predicted RBP	11.36	□□□□□ -0.59
APTX-233	ENST00000496030	MAP3K7	O43318	606 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	CCNT2	O60583	730 aa	Known RBP	11.36	□□□□□ -0.59
APTX-233	ENST00000496030	SRPX2	O60687	465 aa	Predicted RBP	11.36	□□□□□ -0.59
APTX-233	ENST00000496030	SPAG7	O75391	227 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	MED26	O95402	600 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	FAM87A	P0C7U9	286 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	C1GALT1C1L	P0DN25	315 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	GNAZ	P19086	355 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	EEF1D	P29692	281 aa	Known RBP	11.36	□□□□□ -0.59
APTX-233	ENST00000496030	BCL6	P41182	706 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	CASP2	P42575	452 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	CCR8	P51685	355 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	ITGA1	P56199	1179 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	TLE1	Q04724	770 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	SRSF6	Q13247	344 aa	Known RBP	11.36	□□□□□ -0.59
APTX-233	ENST00000496030	MPP2	Q14168	576 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	DOC2A	Q14183	400 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	PRTG	Q2VWP7	1150 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	WASHC2D	Q5SRD0	308 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	TMEM164	Q5U3C3	297 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	ATG9B	Q674R7	924 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	HIST2H2BC	Q6DN03	193 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	METTL2B	Q6P1Q9	378 aa	Known RBP	11.36	□□□□□ -0.59
APTX-233	ENST00000496030	ZYG11A	Q6WRX3	759 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	TM4SF19	Q96DZ7	209 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	MOCOS	Q96EN8	888 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	APOPT1	Q96IL0	206 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	NSUN5	Q96P11	429 aa	Known RBP	11.36	□□□□□ -0.59
APTX-233	ENST00000496030	EHD1	Q9H4M9	534 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	11.36	□□□□□ -0.59
APTX-233	ENST00000496030	TMBIM4	Q9HC24	238 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	ZBTB26	Q9HCK0	441 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	GEMIN8	Q9NWZ8	242 aa	Known RBP	11.36	□□□□□ -0.59
APTX-233	ENST00000496030	GPRC5B	Q9NZH0	403 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	SLC17A7	Q9P2U7	560 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	COPG2	Q9UBF2	871 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	OPTC	Q9UBM4	332 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	PCTP	Q9UKL6	214 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	ZNF490	Q9ULM2	529 aa	Predicted RBP	11.36	□□□□□ -0.59
APTX-233	ENST00000496030	DYRK1B	Q9Y463	629 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	PCDHB3	Q9Y5E6	796 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	PCDHGA4	Q9Y5G9	962 aa		11.36	□□□□□ -0.59
APTX-233	ENST00000496030	TNPO3	Q9Y5L0	923 aa	Known RBP	11.36	□□□□□ -0.59
APTX-233	ENST00000496030	TRBC2	A0A5B9	178 aa		11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms