RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	FAM53B	Q14153	422 aa		11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	LY6D	Q14210	128 aa		11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	UAP1	Q16222	522 aa	Predicted RBP	11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	NDUFA9	Q16795	377 aa		11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	FAM83E	Q2M2I3	478 aa		11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	HKDC1	Q2TB90	917 aa		11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	SULT1C3	Q6IMI6	304 aa		11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	TAOK1	Q7L7X3	1001 aa		11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	CMC1	Q7Z7K0	106 aa		11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	ISCA2	Q86U28	154 aa		11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	RAB43	Q86YS6	212 aa		11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	ARHGEF39	Q8N4T4	335 aa		11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	MFSD9	Q8NBP5	474 aa		11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	CAMKV	Q8NCB2	501 aa		11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	SLC5A11	Q8WWX8	675 aa		11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	NEIL2	Q969S2	332 aa		11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	TM4SF19	Q96DZ7	209 aa		11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	MRRF	Q96E11	262 aa	Known RBP	11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	C10orf90	Q96M02	699 aa		11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	SYNPO2L	Q9H987	977 aa		11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	PELI2	Q9HAT8	420 aa		11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	ZNF180	Q9UJW8	692 aa		11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	RNF112	Q9ULX5	631 aa		11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	SH2B3	Q9UQQ2	575 aa		11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	RUVBL1	Q9Y265	456 aa	Known RBP	11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	SLC22A14	Q9Y267	594 aa		11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	PTRH2	Q9Y3E5	179 aa	Known RBP	11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	DYRK1B	Q9Y463	629 aa		11.78	□□□□□ -0.52
MRPL55-233	ENST00000495899	TRBC2	A0A5B9	178 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	VSTM2B	A6NLU5	285 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	ESPN	B1AK53	854 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	ZNF500	O60304	480 aa	Predicted RBP	11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	KRT38	O76015	456 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	S100B	P04271	92 aa	Predicted RBP	11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	C2	P06681	752 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	ABHD2	P08910	425 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	TYK2	P29597	1187 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	MSH2	P43246	934 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	OR1D4	P47884	311 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	SERPINB8	P50452	374 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	PMS2	P54278	862 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	C19orf57	Q0VDD7	668 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	KCNAB2	Q13303	367 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	PWP1	Q13610	501 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	SLC9A5	Q14940	896 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	OR4D1	Q15615	310 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	NKG7	Q16617	165 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	LINC01559	Q495D7	138 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	LGSN	Q5TDP6	509 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	MED25	Q71SY5	747 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	VN1R4	Q7Z5H5	301 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	PLD3	Q8IV08	490 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	TMEM102	Q8N9M5	508 aa	Predicted RBP	11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	ZNF511	Q8NB15	262 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	PDPR	Q8NCN5	879 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	RHEBL1	Q8TAI7	183 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	SLC13A3	Q8WWT9	602 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	COL26A1	Q96A83	441 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	DRC3	Q9H069	523 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	SNX15	Q9NRS6	342 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	IGSF5	Q9NSI5	407 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	GPRC5B	Q9NZH0	403 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	CD274	Q9NZQ7	290 aa		11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	ZNF282	Q9UDV7	671 aa	Predicted RBP	11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	PTBP2	Q9UKA9	531 aa	Known RBP	11.77	□□□□□ -0.53
MRPL55-233	ENST00000495899	IGLV3-12	A0A075B6K2	115 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899		A0A096LPK6	155 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	FEZF1	A0PJY2	475 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	NCF1B	A6NI72	391 aa	Predicted RBP	11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	SYCE1L	A8MT33	242 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	NCF1C	A8MVU1	366 aa	Predicted RBP	11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899		H0YIG0	161 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	MKRN2OS	H3BPM6	223 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	TAPBP	O15533	448 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	OR1F1	O43749	312 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	LCMT2	O60294	686 aa	Known RBP	11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	KERA	O60938	352 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	CNOT3	O75175	753 aa	Known RBP	11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	H2AFY	O75367	372 aa	Known RBP	11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	RFPL1	O75677	317 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	STK16	O75716	305 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	WDR47	O94967	919 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	KLHL2	O95198	593 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	MED26	O95402	600 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	ALDOA	P04075	364 aa	Known RBP	11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	SLC35G6	P0C7Q6	338 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	NCF1	P14598	390 aa	Predicted RBP	11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	TFEB	P19484	476 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	CXCR2	P25025	360 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	AHR	P35869	848 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	BCL6	P41182	706 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	AVPR1B	P47901	424 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	KCNC1	P48547	511 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	RRAD	P55042	308 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	OCA2	Q04671	838 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	DLG1	Q12959	904 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	BMPR2	Q13873	1038 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	ACAP2	Q15057	778 aa		11.76	□□□□□ -0.53
MRPL55-233	ENST00000495899	CATSPERE	Q5SY80	951 aa		11.76	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms