RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 C19orf48Q6RUI8 117 aa18.54■□□□□ 0.56
HDAC4-212ENST00000495497 RPS27LQ71UM5 84 aaKnown RBP18.54■□□□□ 0.56
HDAC4-212ENST00000495497 TRABD2AQ86V40 505 aa18.54■□□□□ 0.56
HDAC4-212ENST00000495497 LCA5Q86VQ0 697 aa18.54■□□□□ 0.56
HDAC4-212ENST00000495497 CNPY4Q8N129 248 aa18.54■□□□□ 0.56
HDAC4-212ENST00000495497 MOCOSQ96EN8 888 aa18.54■□□□□ 0.56
HDAC4-212ENST00000495497 CRELD1Q96HD1 420 aa18.54■□□□□ 0.56
HDAC4-212ENST00000495497 C10orf90Q96M02 699 aa18.54■□□□□ 0.56
HDAC4-212ENST00000495497 LRFN5Q96NI6 719 aa18.54■□□□□ 0.56
HDAC4-212ENST00000495497 AIF1LQ9BQI0 150 aa18.54■□□□□ 0.56
HDAC4-212ENST00000495497 CAPS2Q9BXY5 557 aa18.54■□□□□ 0.56
HDAC4-212ENST00000495497 CHST8Q9H2A9 424 aa18.54■□□□□ 0.56
HDAC4-212ENST00000495497 ACSS2Q9NR19 701 aa18.54■□□□□ 0.56
HDAC4-212ENST00000495497 ENAMQ9NRM1 1142 aa18.54■□□□□ 0.56
HDAC4-212ENST00000495497 TXLNGQ9NUQ3 528 aa18.54■□□□□ 0.56
HDAC4-212ENST00000495497 MRPS18BQ9Y676 258 aaKnown RBP18.54■□□□□ 0.56
HDAC4-212ENST00000495497 GLRA3O75311 464 aa18.53■□□□□ 0.56
HDAC4-212ENST00000495497 KLK3P07288 261 aaPredicted RBP18.53■□□□□ 0.56
HDAC4-212ENST00000495497 TCN2P20062 427 aa18.53■□□□□ 0.56
HDAC4-212ENST00000495497 CD22P20273 847 aa18.53■□□□□ 0.56
HDAC4-212ENST00000495497 ITGAXP20702 1163 aa18.53■□□□□ 0.56
HDAC4-212ENST00000495497 SCTRP47872 440 aa18.53■□□□□ 0.56
HDAC4-212ENST00000495497 ARSFP54793 590 aa18.53■□□□□ 0.56
HDAC4-212ENST00000495497 CHIT1Q13231 466 aa18.53■□□□□ 0.56
HDAC4-212ENST00000495497 GOLGA7Q7Z5G4 137 aa18.53■□□□□ 0.56
HDAC4-212ENST00000495497 ASPGQ86U10 573 aa18.53■□□□□ 0.56
HDAC4-212ENST00000495497 SRRM1Q8IYB3 904 aaKnown RBP18.53■□□□□ 0.56
HDAC4-212ENST00000495497 ANKRD53Q8N9V6 530 aa18.53■□□□□ 0.56
HDAC4-212ENST00000495497 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.53■□□□□ 0.56
HDAC4-212ENST00000495497 TM4SF19Q96DZ7 209 aa18.53■□□□□ 0.56
HDAC4-212ENST00000495497 THAP11Q96EK4 314 aa18.53■□□□□ 0.56
HDAC4-212ENST00000495497 GBP5Q96PP8 586 aa18.53■□□□□ 0.56
HDAC4-212ENST00000495497 CCNL2Q96S94 520 aaPredicted RBP18.53■□□□□ 0.56
HDAC4-212ENST00000495497 SARGQ9BW04 601 aa18.53■□□□□ 0.56
HDAC4-212ENST00000495497 CPNE5Q9HCH3 593 aa18.53■□□□□ 0.56
HDAC4-212ENST00000495497 IL17BQ9UHF5 180 aa18.53■□□□□ 0.56
HDAC4-212ENST00000495497 TMCO1Q9UM00 188 aa18.53■□□□□ 0.56
HDAC4-212ENST00000495497 SRPK3Q9UPE1 567 aa18.53■□□□□ 0.56
HDAC4-212ENST00000495497 SSUH2Q9Y2M2 353 aa18.53■□□□□ 0.56
HDAC4-212ENST00000495497 MRPS2Q9Y399 296 aaKnown RBP18.53■□□□□ 0.56
HDAC4-212ENST00000495497 ANGPTL3Q9Y5C1 460 aa18.53■□□□□ 0.56
HDAC4-212ENST00000495497 AHCTF1Q8WYP5 2266 aa18.53■□□□□ 0.56
HDAC4-212ENST00000495497 TERTO14746 1132 aaKnown RBP18.52■□□□□ 0.56
HDAC4-212ENST00000495497 DSCR3O14972 297 aa18.52■□□□□ 0.56
HDAC4-212ENST00000495497 DLX3O60479 287 aa18.52■□□□□ 0.56
HDAC4-212ENST00000495497 H2AFYO75367 372 aaKnown RBP18.52■□□□□ 0.56
HDAC4-212ENST00000495497 SPAG7O75391 227 aa18.52■□□□□ 0.56
HDAC4-212ENST00000495497 SERPIND1P05546 499 aa18.52■□□□□ 0.56
HDAC4-212ENST00000495497 CREB1P16220 341 aa18.52■□□□□ 0.56
HDAC4-212ENST00000495497 EPB42P16452 691 aa18.52■□□□□ 0.56
HDAC4-212ENST00000495497 TAC1P20366 129 aa18.52■□□□□ 0.56
HDAC4-212ENST00000495497 CRHR1P34998 444 aa18.52■□□□□ 0.56
HDAC4-212ENST00000495497 CCT5P48643 541 aa18.52■□□□□ 0.56
HDAC4-212ENST00000495497 CYP4F2P78329 520 aa18.52■□□□□ 0.56
HDAC4-212ENST00000495497 IRF8Q02556 426 aa18.52■□□□□ 0.56
HDAC4-212ENST00000495497 GTF2H2Q13888 395 aa18.52■□□□□ 0.56
HDAC4-212ENST00000495497 FAM214AQ32MH5 1076 aa18.52■□□□□ 0.56
HDAC4-212ENST00000495497 BROXQ5VW32 411 aa18.52■□□□□ 0.56
HDAC4-212ENST00000495497 GTF2H2CQ6P1K8 395 aa18.52■□□□□ 0.56
HDAC4-212ENST00000495497 ZNF517Q6ZMY9 492 aaPredicted RBP18.52■□□□□ 0.56
HDAC4-212ENST00000495497 ARHGEF39Q8N4T4 335 aa18.52■□□□□ 0.56
HDAC4-212ENST00000495497 MYRIPQ8NFW9 859 aa18.52■□□□□ 0.56
HDAC4-212ENST00000495497 SLC13A3Q8WWT9 602 aa18.52■□□□□ 0.56
HDAC4-212ENST00000495497 NSUN5Q96P11 429 aaKnown RBP18.52■□□□□ 0.56
HDAC4-212ENST00000495497 GPN2Q9H9Y4 310 aaPredicted RBP18.52■□□□□ 0.56
HDAC4-212ENST00000495497 TNPO3Q9Y5L0 923 aaKnown RBP18.52■□□□□ 0.56
HDAC4-212ENST00000495497 MAU2Q9Y6X3 613 aa18.52■□□□□ 0.56
HDAC4-212ENST00000495497 HEATR5BQ9P2D3 2071 aa18.52■□□□□ 0.56
HDAC4-212ENST00000495497 ACACAQ13085 2346 aa18.52■□□□□ 0.56
HDAC4-212ENST00000495497 MAP1BP46821 2468 aaKnown RBP18.51■□□□□ 0.55
HDAC4-212ENST00000495497 A0A1B0GX78 115 aa18.51■□□□□ 0.55
HDAC4-212ENST00000495497 STX16-NPEPL1H3BU86 382 aa18.51■□□□□ 0.55
HDAC4-212ENST00000495497 E2F3O00716 465 aa18.51■□□□□ 0.55
HDAC4-212ENST00000495497 STX16O14662 325 aa18.51■□□□□ 0.55
HDAC4-212ENST00000495497 NDUFS4O43181 175 aa18.51■□□□□ 0.55
HDAC4-212ENST00000495497 KATNA1O75449 491 aa18.51■□□□□ 0.55
HDAC4-212ENST00000495497 PROCP04070 461 aa18.51■□□□□ 0.55
HDAC4-212ENST00000495497 CAPN1P07384 714 aa18.51■□□□□ 0.55
HDAC4-212ENST00000495497 OR1D4P47884 311 aa18.51■□□□□ 0.55
HDAC4-212ENST00000495497 DCDP81605 110 aaKnown RBP18.51■□□□□ 0.55
HDAC4-212ENST00000495497 NFKB2Q00653 900 aa18.51■□□□□ 0.55
HDAC4-212ENST00000495497 DNASE1L3Q13609 305 aa18.51■□□□□ 0.55
HDAC4-212ENST00000495497 FAM69BQ5VUD6 431 aa18.51■□□□□ 0.55
HDAC4-212ENST00000495497 YOD1Q5VVQ6 348 aaPredicted RBP18.51■□□□□ 0.55
HDAC4-212ENST00000495497 ADNP2Q6IQ32 1131 aa18.51■□□□□ 0.55
HDAC4-212ENST00000495497 FAM198BQ6UWH4 519 aa18.51■□□□□ 0.55
HDAC4-212ENST00000495497 TBC1D19Q8N5T2 526 aa18.51■□□□□ 0.55
HDAC4-212ENST00000495497 BANPQ8N9N5 519 aa18.51■□□□□ 0.55
HDAC4-212ENST00000495497 KCT2Q8NC54 265 aa18.51■□□□□ 0.55
HDAC4-212ENST00000495497 CAMKVQ8NCB2 501 aa18.51■□□□□ 0.55
HDAC4-212ENST00000495497 ZCCHC10Q8TBK6 192 aa18.51■□□□□ 0.55
HDAC4-212ENST00000495497 PROKR1Q8TCW9 393 aa18.51■□□□□ 0.55
HDAC4-212ENST00000495497 KIAA1143Q96AT1 154 aaPredicted RBP18.51■□□□□ 0.55
HDAC4-212ENST00000495497 PTCD3Q96EY7 689 aaKnown RBP18.51■□□□□ 0.55
HDAC4-212ENST00000495497 CENPHQ9H3R5 247 aa18.51■□□□□ 0.55
HDAC4-212ENST00000495497 IPPKQ9H8X2 491 aa18.51■□□□□ 0.55
HDAC4-212ENST00000495497 ZFP69BQ9UJL9 534 aa18.51■□□□□ 0.55
HDAC4-212ENST00000495497 PCTPQ9UKL6 214 aa18.51■□□□□ 0.55
HDAC4-212ENST00000495497 GRID1Q9ULK0 1009 aa18.51■□□□□ 0.55
HDAC4-212ENST00000495497 ZNF490Q9ULM2 529 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms