RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 MARVELD3Q96A59 401 aa21.98■■□□□ 1.11
COL27A1-208ENST00000494780 MAGOHBQ96A72 148 aaKnown RBP21.98■■□□□ 1.11
COL27A1-208ENST00000494780 CYTH2Q99418 400 aa21.98■■□□□ 1.11
COL27A1-208ENST00000494780 STMN3Q9NZ72 180 aa21.98■■□□□ 1.11
COL27A1-208ENST00000494780 COPG2Q9UBF2 871 aa21.98■■□□□ 1.11
COL27A1-208ENST00000494780 C19orf25Q9UFG5 118 aaPredicted RBP21.98■■□□□ 1.11
COL27A1-208ENST00000494780 FBXO5Q9UKT4 447 aa21.98■■□□□ 1.11
COL27A1-208ENST00000494780 PRAMEF2O60811 474 aa21.97■■□□□ 1.11
COL27A1-208ENST00000494780 MAGEA3P43357 314 aa21.97■■□□□ 1.11
COL27A1-208ENST00000494780 TBPL1P62380 186 aa21.97■■□□□ 1.11
COL27A1-208ENST00000494780 SNRPNP63162 240 aaKnown RBP21.97■■□□□ 1.11
COL27A1-208ENST00000494780 ZNF33BQ06732 778 aa21.97■■□□□ 1.11
COL27A1-208ENST00000494780 SP5Q6BEB4 398 aaPredicted RBP21.97■■□□□ 1.11
COL27A1-208ENST00000494780 CPEB2Q7Z5Q1 589 aaKnown RBP21.97■■□□□ 1.11
COL27A1-208ENST00000494780 CCDC138Q96M89 665 aa21.97■■□□□ 1.11
COL27A1-208ENST00000494780 ABCA12Q86UK0 2595 aa21.96■■□□□ 1.11
COL27A1-208ENST00000494780 HAUS5O94927 633 aa21.96■■□□□ 1.11
COL27A1-208ENST00000494780 STATHP02808 62 aa21.96■■□□□ 1.11
COL27A1-208ENST00000494780 CSNK1G2P78368 415 aa21.96■■□□□ 1.11
COL27A1-208ENST00000494780 MINDY4Q4G0A6 757 aa21.96■■□□□ 1.11
COL27A1-208ENST00000494780 MFSD4BQ5TF39 518 aa21.96■■□□□ 1.11
COL27A1-208ENST00000494780 PLAG1Q6DJT9 500 aa21.96■■□□□ 1.11
COL27A1-208ENST00000494780 TMEM214Q6NUQ4 689 aaKnown RBP21.96■■□□□ 1.11
COL27A1-208ENST00000494780 UGT3A1Q6NUS8 523 aa21.96■■□□□ 1.11
COL27A1-208ENST00000494780 RASGEF1CQ8N431 466 aa21.96■■□□□ 1.11
COL27A1-208ENST00000494780 CAMKVQ8NCB2 501 aa21.96■■□□□ 1.11
COL27A1-208ENST00000494780 OR51Q1Q8NH59 317 aa21.96■■□□□ 1.11
COL27A1-208ENST00000494780 SIGLEC10Q96LC7 697 aa21.96■■□□□ 1.11
COL27A1-208ENST00000494780 FAM167BQ9BTA0 163 aa21.96■■□□□ 1.11
COL27A1-208ENST00000494780 AARSD1Q9BTE6 412 aaKnown RBP21.96■■□□□ 1.11
COL27A1-208ENST00000494780 NEU2Q9Y3R4 380 aa21.96■■□□□ 1.11
COL27A1-208ENST00000494780 MAD1L1Q9Y6D9 718 aa21.96■■□□□ 1.11
COL27A1-208ENST00000494780 ARHGAP10A1A4S6 786 aa21.95■■□□□ 1.1
COL27A1-208ENST00000494780 PRSS44E7EML9 344 aa21.95■■□□□ 1.1
COL27A1-208ENST00000494780 SEC24DO94855 1032 aaPredicted RBP21.95■■□□□ 1.1
COL27A1-208ENST00000494780 UNC5CO95185 931 aa21.95■■□□□ 1.1
COL27A1-208ENST00000494780 TNFRSF8P28908 595 aa21.95■■□□□ 1.1
COL27A1-208ENST00000494780 COILP38432 576 aaPredicted RBP21.95■■□□□ 1.1
COL27A1-208ENST00000494780 BCL6P41182 706 aa21.95■■□□□ 1.1
COL27A1-208ENST00000494780 XCR1P46094 333 aa21.95■■□□□ 1.1
COL27A1-208ENST00000494780 MPP1Q00013 466 aa21.95■■□□□ 1.1
COL27A1-208ENST00000494780 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.95■■□□□ 1.15e-9■□□□□ 9.9
COL27A1-208ENST00000494780 BTBD16Q32M84 506 aa21.95■■□□□ 1.1
COL27A1-208ENST00000494780 TMEM207Q6UWW9 146 aa21.95■■□□□ 1.1
COL27A1-208ENST00000494780 LANCL3Q6ZV70 420 aa21.95■■□□□ 1.1
COL27A1-208ENST00000494780 PRSS41Q7RTY9 318 aa21.95■■□□□ 1.1
COL27A1-208ENST00000494780 PCGF5Q86SE9 256 aa21.95■■□□□ 1.1
COL27A1-208ENST00000494780 AGGF1Q8N302 714 aaeCLIP21.95■■□□□ 1.1
COL27A1-208ENST00000494780 AMER2Q8N7J2 671 aa21.95■■□□□ 1.1
COL27A1-208ENST00000494780 TM4SF19Q96DZ7 209 aa21.95■■□□□ 1.1
COL27A1-208ENST00000494780 ZNF354BQ96LW1 612 aa21.95■■□□□ 1.1
COL27A1-208ENST00000494780 FAM129AQ9BZQ8 928 aa21.95■■□□□ 1.1
COL27A1-208ENST00000494780 SUCOQ9UBS9 1254 aaKnown RBP21.95■■□□□ 1.1
COL27A1-208ENST00000494780 SEC14L3Q9UDX4 400 aa21.95■■□□□ 1.1
COL27A1-208ENST00000494780 TRMT6Q9UJA5 497 aaKnown RBP21.95■■□□□ 1.1
COL27A1-208ENST00000494780 IGHV3-20A0A0C4DH32 117 aa21.94■■□□□ 1.1
COL27A1-208ENST00000494780 A8MUI8 341 aa21.94■■□□□ 1.1
COL27A1-208ENST00000494780 C8GP07360 202 aa21.94■■□□□ 1.1
COL27A1-208ENST00000494780 IL1RNP18510 177 aa21.94■■□□□ 1.1
COL27A1-208ENST00000494780 MST1P26927 711 aa21.94■■□□□ 1.1
COL27A1-208ENST00000494780 RGS4P49798 205 aa21.94■■□□□ 1.1
COL27A1-208ENST00000494780 AGTR2P50052 363 aa21.94■■□□□ 1.1
COL27A1-208ENST00000494780 ART3Q13508 389 aa21.94■■□□□ 1.1
COL27A1-208ENST00000494780 CYP1B1Q16678 543 aa21.94■■□□□ 1.1
COL27A1-208ENST00000494780 HSP90AA5PQ58FG0 334 aa21.94■■□□□ 1.1
COL27A1-208ENST00000494780 H3F3CQ6NXT2 135 aa21.94■■□□□ 1.1
COL27A1-208ENST00000494780 CCDC137Q6PK04 289 aaKnown RBP21.94■■□□□ 1.1
COL27A1-208ENST00000494780 C17orf64Q86WR6 236 aa21.94■■□□□ 1.1
COL27A1-208ENST00000494780 NAT8LQ8N9F0 302 aa21.94■■□□□ 1.1
COL27A1-208ENST00000494780 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.94■■□□□ 1.1
COL27A1-208ENST00000494780 PBKQ96KB5 322 aa21.94■■□□□ 1.1
COL27A1-208ENST00000494780 MACROD1Q9BQ69 325 aa21.94■■□□□ 1.1
COL27A1-208ENST00000494780 PARVBQ9HBI1 364 aa21.94■■□□□ 1.1
COL27A1-208ENST00000494780 ANKHQ9HCJ1 492 aa21.94■■□□□ 1.1
COL27A1-208ENST00000494780 HCN3Q9P1Z3 774 aa21.94■■□□□ 1.1
COL27A1-208ENST00000494780 ADAMTS6Q9UKP5 1117 aa21.94■■□□□ 1.1
COL27A1-208ENST00000494780 PDE10AQ9Y233 779 aa21.94■■□□□ 1.1
COL27A1-208ENST00000494780 TRGV8A0A0C4DH27 118 aa21.93■■□□□ 1.1
COL27A1-208ENST00000494780 SGK494L7N484 410 aa21.93■■□□□ 1.1
COL27A1-208ENST00000494780 CCND1P24385 295 aa21.93■■□□□ 1.1
COL27A1-208ENST00000494780 SP140Q13342 867 aa21.93■■□□□ 1.1
COL27A1-208ENST00000494780 MTFR2Q6P444 385 aa21.93■■□□□ 1.1
COL27A1-208ENST00000494780 AGTRAPQ6RW13 159 aa21.93■■□□□ 1.1
COL27A1-208ENST00000494780 ANKRD37Q7Z713 158 aa21.93■■□□□ 1.1
COL27A1-208ENST00000494780 ASPGQ86U10 573 aa21.93■■□□□ 1.1
COL27A1-208ENST00000494780 LRRC8AQ8IWT6 810 aa21.93■■□□□ 1.1
COL27A1-208ENST00000494780 PALM2Q8IXS6 379 aa21.93■■□□□ 1.1
COL27A1-208ENST00000494780 SRRM1Q8IYB3 904 aaKnown RBP21.93■■□□□ 1.1
COL27A1-208ENST00000494780 EEF1AKMT1Q8WVE0 214 aa21.93■■□□□ 1.1
COL27A1-208ENST00000494780 RUBCNLQ9H714 662 aa21.93■■□□□ 1.1
COL27A1-208ENST00000494780 IARS2Q9NSE4 1012 aaKnown RBP21.93■■□□□ 1.1
COL27A1-208ENST00000494780 PCDHGB6Q9Y5F9 930 aa21.93■■□□□ 1.1
COL27A1-208ENST00000494780 KLF2Q9Y5W3 355 aaPredicted RBP21.93■■□□□ 1.1
COL27A1-208ENST00000494780 LRBAP50851 2863 aa21.92■■□□□ 1.1
COL27A1-208ENST00000494780 SLC16A5O15375 505 aa21.92■■□□□ 1.1
COL27A1-208ENST00000494780 GRK3P35626 688 aa21.92■■□□□ 1.1
COL27A1-208ENST00000494780 RBPJQ06330 500 aa21.92■■□□□ 1.1
COL27A1-208ENST00000494780 NAA30Q147X3 362 aaPredicted RBP21.92■■□□□ 1.1
COL27A1-208ENST00000494780 EXT1Q16394 746 aa21.92■■□□□ 1.1
COL27A1-208ENST00000494780 ZNF766Q5HY98 468 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms