RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 EIF3FO00303 357 aaPredicted RBP9.1□□□□□ -0.95
MSH5-218ENST00000494646 TXNDC9O14530 226 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 PRPF4O43172 522 aaKnown RBP eCLIP9.1□□□□□ -0.95
MSH5-218ENST00000494646 GUCA1CO95843 209 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 HPP00738 406 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 F10P00742 488 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 RNF224P0DH78 156 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 COX6A1P12074 109 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 CDH1P12830 882 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 GP1BBP13224 206 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 ACPPP15309 386 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 NPPBP16860 134 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 PAFAH1B1P43034 410 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 EFNA3P52797 238 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 EMP3P54852 163 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 IL2P60568 153 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 CDC16Q13042 620 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 FAM53BQ14153 422 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 MORF4L2Q15014 288 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 NDUFA9Q16795 377 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 CRB2Q5IJ48 1285 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 GARNL3Q5VVW2 1013 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 HIBCHQ6NVY1 386 aaPredicted RBP9.1□□□□□ -0.95
MSH5-218ENST00000494646 TMEM207Q6UWW9 146 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 VN1R4Q7Z5H5 301 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 SLC26A11Q86WA9 606 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 C17orf64Q86WR6 236 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 CNTN4Q8IWV2 1026 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 KBTBD2Q8IY47 623 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 ARHGEF39Q8N4T4 335 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 SIRT6Q8N6T7 355 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 KCT2Q8NC54 265 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 OR1N1Q8NGS0 311 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 ZCCHC10Q8TBK6 192 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 BRIX1Q8TDN6 353 aaKnown RBP9.1□□□□□ -0.95
MSH5-218ENST00000494646 SLCO2A1Q92959 643 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 MVB12AQ96EY5 273 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 SNF8Q96H20 258 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 KRT12Q99456 494 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 OLFM1Q99784 485 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 WDR77Q9BQA1 342 aaPredicted RBP9.1□□□□□ -0.95
MSH5-218ENST00000494646 WDR83Q9BRX9 315 aaKnown RBP9.1□□□□□ -0.95
MSH5-218ENST00000494646 MKKSQ9NPJ1 570 aaPredicted RBP9.1□□□□□ -0.95
MSH5-218ENST00000494646 IKZF3Q9UKT9 509 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 MKL2Q9ULH7 1088 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 NOVA2Q9UNW9 492 aaKnown RBP9.1□□□□□ -0.95
MSH5-218ENST00000494646 TEX264Q9Y6I9 313 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 CRYBG3Q68DQ2 2970 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 CENPEQ02224 2701 aa9.1□□□□□ -0.95
MSH5-218ENST00000494646 DIDO1Q9BTC0 2240 aaKnown RBP9.09□□□□□ -0.95
MSH5-218ENST00000494646 IGHV1-45A0A0A0MS14 117 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 EFCAB8A8MWE9 144 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 SLC16A5O15375 505 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 DNAJB6O75190 326 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 PIAS1O75925 651 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 WFS1O76024 890 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 BMP10O95393 424 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 TSPAN12O95859 305 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 SERPIND1P05546 499 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 UQCRHP07919 91 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 PRR35P0CG20 571 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 IL1RNP18510 177 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 HRH2P25021 359 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 VARSP26640 1264 aaKnown RBP9.09□□□□□ -0.95
MSH5-218ENST00000494646 BCL6P41182 706 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 ST13P50502 369 aaKnown RBP9.09□□□□□ -0.95
MSH5-218ENST00000494646 ARL4CP56559 192 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 RPS15AP62244 130 aaKnown RBP9.09□□□□□ -0.95
MSH5-218ENST00000494646 RELAQ04206 551 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 SRSF11Q05519 484 aaKnown RBP9.09□□□□□ -0.95
MSH5-218ENST00000494646 PDIA2Q13087 525 aaKnown RBP9.09□□□□□ -0.95
MSH5-218ENST00000494646 ELOAQ14241 798 aaKnown RBP9.09□□□□□ -0.95
MSH5-218ENST00000494646 FASTKD3Q14CZ7 662 aaKnown RBP9.09□□□□□ -0.95
MSH5-218ENST00000494646 MINDY4Q4G0A6 757 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 CATSPEREQ5SY80 951 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 B3GNTL1Q67FW5 361 aaPredicted RBP9.09□□□□□ -0.95
MSH5-218ENST00000494646 CAPN13Q6MZZ7 669 aaPredicted RBP9.09□□□□□ -0.95
MSH5-218ENST00000494646 LRRC8EQ6NSJ5 796 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 LCTLQ6UWM7 567 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 IGFL2Q6UWQ7 119 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 ISLR2Q6UXK2 745 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 CAPN12Q6ZSI9 719 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 KIAA0408Q6ZU52 694 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 SYDE1Q6ZW31 735 aaPredicted RBP9.09□□□□□ -0.95
MSH5-218ENST00000494646 ASPGQ86U10 573 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 ZC3H7AQ8IWR0 971 aaKnown RBP9.09□□□□□ -0.95
MSH5-218ENST00000494646 FBXO36Q8NEA4 188 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 OR51Q1Q8NH59 317 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 PPP4R1Q8TF05 950 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 SLC13A3Q8WWT9 602 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 PSMF1Q92530 271 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 TM4SF19Q96DZ7 209 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 MOCOSQ96EN8 888 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 MAGEB10Q96LZ2 347 aaPredicted RBP9.09□□□□□ -0.95
MSH5-218ENST00000494646 LMF1Q96S06 567 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 CYTH2Q99418 400 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 NAPGQ99747 312 aaPredicted RBP9.09□□□□□ -0.95
MSH5-218ENST00000494646 TRIM54Q9BYV2 358 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 TGIF2Q9GZN2 237 aa9.09□□□□□ -0.95
MSH5-218ENST00000494646 PCBD2Q9H0N5 130 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms