RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 CFAP61Q8NHU2 1237 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 OCC1Q8TAD7 63 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 PAQR8Q8TEZ7 354 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 TSEN15Q8WW01 171 aaKnown RBP2.13□□□□□ -2.07
PTPN12-212ENST00000494248 CKAP2Q8WWK9 683 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 SELENOMQ8WWX9 145 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 LIPHQ8WWY8 451 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 PSPC1Q8WXF1 523 aaKnown RBP2.13□□□□□ -2.07
PTPN12-212ENST00000494248 RLN3Q8WXF3 142 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 RAB40AQ8WXH6 277 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 OR1E3Q8WZA6 343 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 CNOT9Q92600 299 aaKnown RBP2.13□□□□□ -2.07
PTPN12-212ENST00000494248 LPGAT1Q92604 370 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 APBB2Q92870 758 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 ARRDC3Q96B67 414 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 MMABQ96EY8 250 aaPredicted RBP2.13□□□□□ -2.07
PTPN12-212ENST00000494248 DTD2Q96FN9 168 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 REXO5Q96IC2 774 aaKnown RBP2.13□□□□□ -2.07
PTPN12-212ENST00000494248 ZNF558Q96NG5 402 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 LRRC3BQ96PB8 259 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 KLHL5Q96PQ7 755 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 PCYT2Q99447 389 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 NPAS1Q99742 590 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 CLSTN3Q9BQT9 956 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 ZNF577Q9BSK1 485 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 DDX47Q9H0S4 455 aaKnown RBP2.13□□□□□ -2.07
PTPN12-212ENST00000494248 MMP27Q9H306 513 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 UBQLN3Q9H347 655 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 MVB12BQ9H7P6 319 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 NOL11Q9H8H0 719 aaKnown RBP2.13□□□□□ -2.07
PTPN12-212ENST00000494248 METTL7AQ9H8H3 244 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 ANKZF1Q9H8Y5 726 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 PANK4Q9NVE7 773 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 TMEM161AQ9NX61 479 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 STX18Q9P2W9 335 aaKnown RBP2.13□□□□□ -2.07
PTPN12-212ENST00000494248 DBF4Q9UBU7 674 aaPredicted RBP2.13□□□□□ -2.07
PTPN12-212ENST00000494248 HSPB7Q9UBY9 170 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 ATPIF1Q9UII2 106 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 HAO1Q9UJM8 370 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 PLAGL1Q9UM63 463 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 CDC14AQ9UNH5 594 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 RCE1Q9Y256 329 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 SLC9A8Q9Y2E8 581 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 WBP11Q9Y2W2 641 aaKnown RBP2.13□□□□□ -2.07
PTPN12-212ENST00000494248 RAP2CQ9Y3L5 183 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 HBS1LQ9Y450 684 aaKnown RBP2.13□□□□□ -2.07
PTPN12-212ENST00000494248 MFHAS1Q9Y4C4 1052 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 PCDHAC2Q9Y5I4 1007 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 PTCH1Q13635 1447 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 PHLPP2Q6ZVD8 1323 aa2.13□□□□□ -2.07
PTPN12-212ENST00000494248 PARD3Q8TEW0 1356 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 KIF27Q86VH2 1401 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 A0A0A6YYC8 382 aaPredicted RBP2.12□□□□□ -2.07
PTPN12-212ENST00000494248 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.12□□□□□ -2.07
PTPN12-212ENST00000494248 FAM240BA0A1B0GVZ2 78 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 A0A1W2PPW3 197 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 LNP1A1A4G5 178 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 HEATR9A2RTY3 570 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 NPIPB13A6NJU9 1138 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 C3orf70A6NLC5 250 aaPredicted RBP2.12□□□□□ -2.07
PTPN12-212ENST00000494248 LRRIQ3A6PVS8 624 aaPredicted RBP2.12□□□□□ -2.07
PTPN12-212ENST00000494248 NPIPB4C9JG80 1138 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 I3L1I5 382 aaPredicted RBP2.12□□□□□ -2.07
PTPN12-212ENST00000494248 K7EQM0 130 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 M0QZQ0 153 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 BMPR1BO00238 502 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 XPO1O14980 1071 aaKnown RBP2.12□□□□□ -2.07
PTPN12-212ENST00000494248 LSM1O15116 133 aaKnown RBP2.12□□□□□ -2.07
PTPN12-212ENST00000494248 POLR1CO15160 346 aaPredicted RBP2.12□□□□□ -2.07
PTPN12-212ENST00000494248 CHADO15335 359 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 RRP8O43159 456 aaKnown RBP2.12□□□□□ -2.07
PTPN12-212ENST00000494248 ST8SIA3O43173 380 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 ZW10O43264 779 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 SLC25A12O75746 678 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 CBR3O75828 277 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 SERPINI2O75830 405 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 TOMM70O94826 608 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 SEC31AO94979 1220 aaKnown RBP2.12□□□□□ -2.07
PTPN12-212ENST00000494248 KAT7O95251 611 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 MOCS3O95396 460 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 CXCL14O95715 111 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 CAVIN2O95810 425 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 MBD3O95983 291 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 SERPINA3P01011 423 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 IL1BP01584 269 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 CXCL10P02778 98 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 ALDOAP04075 364 aaKnown RBP2.12□□□□□ -2.07
PTPN12-212ENST00000494248 CHRM4P08173 479 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 IQCF3P0C7M6 154 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 ZCCHC18P0CG32 403 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 G6PDP11413 515 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 ANPEPP15144 967 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 RPA2P15927 270 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 ZNF12P17014 697 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 PRKACAP17612 351 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 CAPN2P17655 700 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 GNAZP19086 355 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 CYP2B6P20813 491 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 CYP2F1P24903 491 aa2.12□□□□□ -2.07
PTPN12-212ENST00000494248 POU1F1P28069 291 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms