RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 TM4SF19Q96DZ7 209 aa9.25□□□□□ -0.93
UFD1-210ENST00000494054 VPS50Q96JG6 964 aa9.25□□□□□ -0.93
UFD1-210ENST00000494054 OR4K3Q96R72 315 aa9.25□□□□□ -0.93
UFD1-210ENST00000494054 BARD1Q99728 777 aaKnown RBP9.25□□□□□ -0.93
UFD1-210ENST00000494054 NAPGQ99747 312 aaPredicted RBP9.25□□□□□ -0.93
UFD1-210ENST00000494054 WDR77Q9BQA1 342 aaPredicted RBP9.25□□□□□ -0.93
UFD1-210ENST00000494054 PCBD2Q9H0N5 130 aa9.25□□□□□ -0.93
UFD1-210ENST00000494054 MKKSQ9NPJ1 570 aaPredicted RBP9.25□□□□□ -0.93
UFD1-210ENST00000494054 C14orf105Q9NVL8 296 aa9.25□□□□□ -0.93
UFD1-210ENST00000494054 NOVA2Q9UNW9 492 aaKnown RBP9.25□□□□□ -0.93
UFD1-210ENST00000494054 SNX24Q9Y343 169 aa9.25□□□□□ -0.93
UFD1-210ENST00000494054 PSAT1Q9Y617 370 aa9.25□□□□□ -0.93
UFD1-210ENST00000494054 COPG1Q9Y678 874 aaKnown RBP9.25□□□□□ -0.93
UFD1-210ENST00000494054 CNTRLQ7Z7A1 2325 aa9.25□□□□□ -0.93
UFD1-210ENST00000494054 IGHV1-45A0A0A0MS14 117 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 NSG1A0A0A6YYJ2 146 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 OR2W5A6NFC9 320 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 H0YIG0 161 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 SGK494L7N484 410 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 BMP10O95393 424 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 SERPINA7P05543 415 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 HIST1H2AGP0C0S8 130 aaPredicted RBP9.24□□□□□ -0.93
UFD1-210ENST00000494054 PRR35P0CG20 571 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 IL1RNP18510 177 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 HIST1H2ADP20671 130 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 CXCR2P25025 360 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 VARSP26640 1264 aaKnown RBP9.24□□□□□ -0.93
UFD1-210ENST00000494054 SOX11P35716 441 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 RPL21P46778 160 aaKnown RBP9.24□□□□□ -0.93
UFD1-210ENST00000494054 AVPR1BP47901 424 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 ARL4CP56559 192 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 RPS15AP62244 130 aaKnown RBP9.24□□□□□ -0.93
UFD1-210ENST00000494054 MEF2AQ02078 507 aaPredicted RBP9.24□□□□□ -0.93
UFD1-210ENST00000494054 PDIA2Q13087 525 aaKnown RBP9.24□□□□□ -0.93
UFD1-210ENST00000494054 MFAP5Q13361 173 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 PDAP1Q13442 181 aaKnown RBP9.24□□□□□ -0.93
UFD1-210ENST00000494054 PCOLCEQ15113 449 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 NDUFA9Q16795 377 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 HIST2H2BCQ6DN03 193 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 TMEM214Q6NUQ4 689 aaKnown RBP9.24□□□□□ -0.93
UFD1-210ENST00000494054 TMEM205Q6UW68 189 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 SBSNQ6UWP8 590 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 ISLR2Q6UXK2 745 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 ASPGQ86U10 573 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 SLC26A11Q86WA9 606 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 PDSS2Q86YH6 399 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 KBTBD2Q8IY47 623 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 KCT2Q8NC54 265 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 FBXO36Q8NEA4 188 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 GABPB2Q8TAK5 448 aaPredicted RBP9.24□□□□□ -0.93
UFD1-210ENST00000494054 PRR7Q8TB68 274 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 BRIX1Q8TDN6 353 aaKnown RBP9.24□□□□□ -0.93
UFD1-210ENST00000494054 PPP4R1Q8TF05 950 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 LRRC39Q96DD0 335 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 THAP11Q96EK4 314 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 MOCOSQ96EN8 888 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 SNF8Q96H20 258 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 HIST1H2AHQ96KK5 128 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 CNDP1Q96KN2 507 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 RUNDC3BQ96NL0 473 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 KRT12Q99456 494 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 HIST1H2AJQ99878 128 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 H2AFJQ9BTM1 129 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 SLC29A3Q9BZD2 475 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 ARL15Q9NXU5 204 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 PLA2G3Q9NZ20 509 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 MOCS1Q9NZB8 636 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 HCN3Q9P1Z3 774 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 MKL2Q9ULH7 1088 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 PRRC2CQ9Y520 2896 aaKnown RBP9.24□□□□□ -0.93
UFD1-210ENST00000494054 NBPF19A0A087WUL8 3843 aa9.24□□□□□ -0.93
UFD1-210ENST00000494054 SPTBN1Q01082 2364 aaKnown RBP9.23□□□□□ -0.93
UFD1-210ENST00000494054 HIVEP3Q5T1R4 2406 aa9.23□□□□□ -0.93
UFD1-210ENST00000494054 UTP20O75691 2785 aaKnown RBP9.23□□□□□ -0.93
UFD1-210ENST00000494054 ICE1Q9Y2F5 2266 aa9.23□□□□□ -0.93
UFD1-210ENST00000494054 LOC102723996A0A087X1L8 192 aa9.23□□□□□ -0.93
UFD1-210ENST00000494054 IGHV3-20A0A0C4DH32 117 aa9.23□□□□□ -0.93
UFD1-210ENST00000494054 CTAGE15A4D2H0 777 aa9.23□□□□□ -0.93
UFD1-210ENST00000494054 EFCAB8A8MWE9 144 aa9.23□□□□□ -0.93
UFD1-210ENST00000494054 E7ESA3 106 aa9.23□□□□□ -0.93
UFD1-210ENST00000494054 CCDC188H7C350 402 aa9.23□□□□□ -0.93
UFD1-210ENST00000494054 CDC7O00311 574 aa9.23□□□□□ -0.93
UFD1-210ENST00000494054 DNAJB6O75190 326 aa9.23□□□□□ -0.93
UFD1-210ENST00000494054 PIAS1O75925 651 aa9.23□□□□□ -0.93
UFD1-210ENST00000494054 NSA2O95478 260 aaKnown RBP9.23□□□□□ -0.93
UFD1-210ENST00000494054 GUCA1CO95843 209 aa9.23□□□□□ -0.93
UFD1-210ENST00000494054 SAT1P21673 171 aa9.23□□□□□ -0.93
UFD1-210ENST00000494054 CCND1P24385 295 aa9.23□□□□□ -0.93
UFD1-210ENST00000494054 TSFMP43897 325 aaKnown RBP9.23□□□□□ -0.93
UFD1-210ENST00000494054 TAS2R39P59534 338 aa9.23□□□□□ -0.93
UFD1-210ENST00000494054 MGAT5Q09328 741 aa9.23□□□□□ -0.93
UFD1-210ENST00000494054 FRG1Q14331 258 aaKnown RBP9.23□□□□□ -0.93
UFD1-210ENST00000494054 ZNF460Q14592 562 aa9.23□□□□□ -0.93
UFD1-210ENST00000494054 ZNF169Q14929 603 aaPredicted RBP9.23□□□□□ -0.93
UFD1-210ENST00000494054 CATSPEREQ5SY80 951 aa9.23□□□□□ -0.93
UFD1-210ENST00000494054 B3GNTL1Q67FW5 361 aaPredicted RBP9.23□□□□□ -0.93
UFD1-210ENST00000494054 DUPD1Q68J44 220 aa9.23□□□□□ -0.93
UFD1-210ENST00000494054 CAPN13Q6MZZ7 669 aaPredicted RBP9.23□□□□□ -0.93
UFD1-210ENST00000494054 FAM45BPQ6NSW5 357 aa9.23□□□□□ -0.93
UFD1-210ENST00000494054 LANCL3Q6ZV70 420 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms