RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 C4orf45Q96LM5 186 aa5.58□□□□□ -1.52
SMC2-205ENST00000493955 NAP1L3Q99457 506 aaPredicted RBP5.58□□□□□ -1.52
SMC2-205ENST00000493955 ALKBH7Q9BT30 221 aaPredicted RBP5.58□□□□□ -1.52
SMC2-205ENST00000493955 TRMT61BQ9BVS5 477 aaKnown RBP5.58□□□□□ -1.52
SMC2-205ENST00000493955 TSPYL1Q9H0U9 437 aa5.58□□□□□ -1.52
SMC2-205ENST00000493955 RAVER2Q9HCJ3 691 aaKnown RBP5.58□□□□□ -1.52
SMC2-205ENST00000493955 SLC12A6Q9UHW9 1150 aa5.58□□□□□ -1.52
SMC2-205ENST00000493955 HOOK1Q9UJC3 728 aaKnown RBP5.58□□□□□ -1.52
SMC2-205ENST00000493955 TNNQ9UQP3 1299 aa5.58□□□□□ -1.52
SMC2-205ENST00000493955 RPH3AQ9Y2J0 694 aaPredicted RBP5.58□□□□□ -1.52
SMC2-205ENST00000493955 PCDHGB1Q9Y5G3 927 aa5.58□□□□□ -1.52
SMC2-205ENST00000493955 R4GN57 208 aa5.58□□□□□ -1.52
SMC2-205ENST00000493955 EIF4G1Q04637 1599 aaKnown RBP5.58□□□□□ -1.52
SMC2-205ENST00000493955 TRBV2A0A0J9YWF9 115 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 MAGEB16A2A368 324 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 E5RGE8 158 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 PRPSAP2O60256 369 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 ALPPP05187 535 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 ALPPL2P10696 532 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 CPA3P15088 417 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 ELAVL4P26378 380 aaKnown RBP5.57□□□□□ -1.52
SMC2-205ENST00000493955 CD86P42081 329 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 THBS3P49746 956 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 CLDN17P56750 224 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 ABRQ12979 859 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 LCP2Q13094 533 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 PDLIM3Q53GG5 364 aaPredicted RBP5.57□□□□□ -1.52
SMC2-205ENST00000493955 TECRLQ5HYJ1 363 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 TOR1AIP1Q5JTV8 583 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 CATSPER4Q7RTX7 472 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 MIER3Q7Z3K6 550 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 RCOR2Q8IZ40 523 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 TDHQ8IZJ6 230 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 MAB21L3Q8N8X9 362 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 LRTM2Q8N967 370 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 POC1AQ8NBT0 407 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 DMBX1Q8NFW5 382 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 SCARB1Q8WTV0 552 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 METTL21AQ8WXB1 218 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 PIK3R3Q92569 461 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 CD101Q93033 1021 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 FAM46BQ96A09 425 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 VOPP1Q96AW1 172 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 BTBD9Q96Q07 612 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 MEIS3Q99687 375 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 PRMT1Q99873 361 aaKnown RBP5.57□□□□□ -1.52
SMC2-205ENST00000493955 DDX50Q9BQ39 737 aaKnown RBP5.57□□□□□ -1.52
SMC2-205ENST00000493955 NACAP1Q9BZK3 213 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 SHARPINQ9H0F6 387 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 FLRT3Q9NZU0 649 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 TAAR2Q9P1P5 351 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 FOXA2Q9Y261 457 aaPredicted RBP5.57□□□□□ -1.52
SMC2-205ENST00000493955 NSG2Q9Y328 171 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 CECR2Q9BXF3 1484 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 H3BMM5 538 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 ACSL4O60488 711 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 PRDM1O75626 825 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 LETM1O95202 739 aaPredicted RBP5.57□□□□□ -1.52
SMC2-205ENST00000493955 TSHBP01222 138 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 KRT3P12035 628 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 GOT1P17174 413 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 AHCYP23526 432 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 OR3A3P47888 321 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 HERV-K104P61576 105 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 RPP38P78345 283 aaKnown RBP5.57□□□□□ -1.52
SMC2-205ENST00000493955 GPR17Q13304 367 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 PDE7AQ13946 482 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 SQLEQ14534 574 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 ARMCX4Q5H9R4 360 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 UGT3A1Q6NUS8 523 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 LAX1Q8IWV1 398 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 MRPL43Q8N983 215 aaKnown RBP5.57□□□□□ -1.52
SMC2-205ENST00000493955 SAP25Q8TEE9 199 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 THOC3Q96J01 351 aaKnown RBP5.57□□□□□ -1.52
SMC2-205ENST00000493955 ZNF354BQ96LW1 612 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 ZNF560Q96MR9 790 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 SYTL2Q9HCH5 934 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 C19orf25Q9UFG5 118 aaPredicted RBP5.57□□□□□ -1.52
SMC2-205ENST00000493955 MAN1B1Q9UKM7 699 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 ZNF510Q9Y2H8 683 aa5.57□□□□□ -1.52
SMC2-205ENST00000493955 STRAPQ9Y3F4 350 aaKnown RBP5.57□□□□□ -1.52
SMC2-205ENST00000493955 MTF2Q9Y483 593 aaPredicted RBP5.57□□□□□ -1.52
SMC2-205ENST00000493955 PCSK5Q92824 1860 aa5.56□□□□□ -1.52
SMC2-205ENST00000493955 TRBV5-5A0A0J9YX44 114 aa5.56□□□□□ -1.52
SMC2-205ENST00000493955 TMEM129A0AVI4 362 aa5.56□□□□□ -1.52
SMC2-205ENST00000493955 DFFBO76075 338 aa5.56□□□□□ -1.52
SMC2-205ENST00000493955 RAF1P04049 648 aa5.56□□□□□ -1.52
SMC2-205ENST00000493955 MARK3P27448 753 aa5.56□□□□□ -1.52
SMC2-205ENST00000493955 FKBP1BP68106 108 aa5.56□□□□□ -1.52
SMC2-205ENST00000493955 SLC3A1Q07837 685 aa5.56□□□□□ -1.52
SMC2-205ENST00000493955 ILF3Q12906 894 aaKnown RBP eCLIP5.56□□□□□ -1.52
SMC2-205ENST00000493955 PDK1Q15118 436 aa5.56□□□□□ -1.52
SMC2-205ENST00000493955 ZNF542PQ5EBM4 170 aa5.56□□□□□ -1.52
SMC2-205ENST00000493955 SLC25A53Q5H9E4 307 aa5.56□□□□□ -1.52
SMC2-205ENST00000493955 G2E3Q7L622 706 aa5.56□□□□□ -1.52
SMC2-205ENST00000493955 CPEB2Q7Z5Q1 589 aaKnown RBP5.56□□□□□ -1.52
SMC2-205ENST00000493955 ZNF843Q8N446 348 aa5.56□□□□□ -1.52
SMC2-205ENST00000493955 SMYD1Q8NB12 490 aa5.56□□□□□ -1.52
SMC2-205ENST00000493955 EXOC6Q8TAG9 804 aa5.56□□□□□ -1.52
SMC2-205ENST00000493955 PRCCQ92733 491 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms