RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 GSTM5P46439 218 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 NME5P56597 212 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 MRPS21P82921 87 aaKnown RBP9.68□□□□□ -0.86
PRPF3-206ENST00000493553 MS4A2Q01362 244 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 LIPEQ05469 1076 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 DMPKQ09013 629 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 MED21Q13503 144 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 GRAMD1BQ3KR37 738 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 POM121L1PQ3SYA9 428 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 FBXO43Q4G163 708 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 RFTN2Q52LD8 501 aaPredicted RBP9.68□□□□□ -0.86
PRPF3-206ENST00000493553 SGO1Q5FBB7 561 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 ANXA8L1Q5VT79 327 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 EGFLAMQ63HQ2 1017 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 ATG9BQ674R7 924 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 NANOGP8Q6NSW7 305 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 MED27Q6P2C8 311 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 SCIMPQ6UWF3 145 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 USP30Q70CQ3 517 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 PDSS2Q86YH6 399 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 VRK3Q8IV63 474 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 KRT78Q8N1N4 520 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 TMEM132CQ8N3T6 1108 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 LIX1Q8N485 282 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 OR52E4Q8NGH9 312 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 MYLIPQ8WY64 445 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 DNASE1L2Q92874 299 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 TMEM125Q96AQ2 219 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 FAM131CQ96AQ9 280 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 CCDC115Q96NT0 180 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 PKP4Q99569 1192 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 GABRG3Q99928 467 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 KXD1Q9BQD3 176 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 TIMM29Q9BSF4 260 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 DUSP23Q9BVJ7 150 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 SPATA9Q9BWV2 254 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 SGPP1Q9BX95 441 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 TEX101Q9BY14 249 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 ACPTQ9BZG2 426 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 KCNH6Q9H252 994 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 NANOGQ9H9S0 305 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 CCDC177Q9NQR7 707 aaPredicted RBP9.68□□□□□ -0.86
PRPF3-206ENST00000493553 CCM2LQ9NUG4 571 aaPredicted RBP9.68□□□□□ -0.86
PRPF3-206ENST00000493553 SPATA6Q9NWH7 488 aaPredicted RBP9.68□□□□□ -0.86
PRPF3-206ENST00000493553 AHSPQ9NZD4 102 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 ATXN10Q9UBB4 475 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 GIMAP2Q9UG22 337 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 SCOCQ9UIL1 159 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 RAB26Q9ULW5 256 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 CORO2BQ9UQ03 480 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 ITM2BQ9Y287 266 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 MAN2B2Q9Y2E5 1009 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 PLXNA2O75051 1894 aa9.68□□□□□ -0.86
PRPF3-206ENST00000493553 TMEM265A0A087WTH1 108 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 A0A096LPI6 279 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 ANHXE9PGG2 379 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 NME4O00746 187 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 SCELO95171 688 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 SLC16A8O95907 504 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 SLC35G4P0C7Q5 338 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 UQCRBP14927 111 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 EPORP19235 508 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 TCN1P20061 433 aaPredicted RBP9.67□□□□□ -0.86
PRPF3-206ENST00000493553 FASP25445 335 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 GSTM2P28161 218 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 IMPA1P29218 277 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 TRIM23P36406 574 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 HPCAL1P37235 193 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 KIR3DL1P43629 444 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 GSK3BP49841 420 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 GRSF1Q12849 480 aaKnown RBP eCLIP9.67□□□□□ -0.86
PRPF3-206ENST00000493553 BLMHQ13867 455 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 DOC2AQ14183 400 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 USP39Q53GS9 565 aaKnown RBP9.67□□□□□ -0.86
PRPF3-206ENST00000493553 ZBTB37Q5TC79 503 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 AGBL4Q5VU57 503 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 METRNLQ641Q3 311 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 GALNT18Q6P9A2 607 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.67□□□□□ -0.86
PRPF3-206ENST00000493553 MBOAT1Q6ZNC8 495 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 R3HCC1LQ7Z5L2 792 aaKnown RBP9.67□□□□□ -0.86
PRPF3-206ENST00000493553 HDDC3Q8N4P3 179 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 TBC1D19Q8N5T2 526 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 RNF148Q8N7C7 305 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 DCBLD1Q8N8Z6 715 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 DENND6BQ8NEG7 585 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 GANCQ8TET4 914 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 SMPDL3AQ92484 453 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 VPS33AQ96AX1 596 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 EME1Q96AY2 570 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 MED8Q96G25 268 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 NSMCE2Q96MF7 247 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 ZNF570Q96NI8 536 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 QRFPRQ96P65 431 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 GBP5Q96PP8 586 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 OR52E6Q96RD3 313 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 CENPKQ9BS16 269 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 UGT2B28Q9BY64 529 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 ATG10Q9H0Y0 220 aa9.67□□□□□ -0.86
PRPF3-206ENST00000493553 TRIT1Q9H3H1 467 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms