RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 RPL35P42766 123 aaKnown RBP9.39□□□□□ -0.91
VPS8-225ENST00000492449 CRYBB2P43320 205 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 GZMMP51124 257 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 ATXN1P54253 815 aaKnown RBP9.39□□□□□ -0.91
VPS8-225ENST00000492449 SP2Q02086 613 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 ST3GAL4Q11206 333 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 ABRQ12979 859 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 EMC2Q15006 297 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 FCN2Q15485 313 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 GPR68Q15743 365 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 Q3ZCU0 254 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 INO80DQ53TQ3 878 aaPredicted RBP9.39□□□□□ -0.91
VPS8-225ENST00000492449 INTS6LQ5JSJ4 861 aaKnown RBP9.39□□□□□ -0.91
VPS8-225ENST00000492449 PDSS1Q5T2R2 415 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 CD276Q5ZPR3 534 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 TMPRSS9Q7Z410 1059 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 FAM126BQ8IXS8 530 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 PYROXD2Q8N2H3 581 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 PTGR2Q8N8N7 351 aaPredicted RBP9.39□□□□□ -0.91
VPS8-225ENST00000492449 RHEBL1Q8TAI7 183 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 CEP76Q8TAP6 659 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 RNF139Q8WU17 664 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 NXPE2Q96DL1 559 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 DIRAS2Q96HU8 199 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 TBATAQ96M53 351 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 MS4A7Q9GZW8 240 aaPredicted RBP9.39□□□□□ -0.91
VPS8-225ENST00000492449 ESRP2Q9H6T0 727 aaKnown RBP9.39□□□□□ -0.91
VPS8-225ENST00000492449 ABCC13Q9NSE7 274 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 SIRT5Q9NXA8 310 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 GPR83Q9NYM4 423 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 PDP1Q9P0J1 537 aaPredicted RBP9.39□□□□□ -0.91
VPS8-225ENST00000492449 NLKQ9UBE8 527 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 DPP7Q9UHL4 492 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 IKZF3Q9UKT9 509 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 GBF1Q92538 1859 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 TRAV19A0A0A6YYK7 116 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 HYKKA2RU49 373 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 KCNK1O00180 336 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 CFDP00746 253 aaPredicted RBP9.39□□□□□ -0.91
VPS8-225ENST00000492449 ODC1P11926 461 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 MAPK1P28482 360 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 CHRNA5P30532 468 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 HNF1BP35680 557 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 MAN2A2P49641 1150 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 ADAM15Q13444 863 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 DDI2Q5TDH0 399 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 FAM171A1Q5VUB5 890 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 TRIQKQ629K1 86 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 NADSYN1Q6IA69 706 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 TMEM207Q6UWW9 146 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 HHIPL2Q6UWX4 724 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 TRMT1LQ7Z2T5 733 aaKnown RBP9.39□□□□□ -0.91
VPS8-225ENST00000492449 PPHLN1Q8NEY8 458 aaKnown RBP9.39□□□□□ -0.91
VPS8-225ENST00000492449 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.39□□□□□ -0.911e-6■■■■■ 71.5
VPS8-225ENST00000492449 MASTLQ96GX5 879 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 TMEM43Q9BTV4 400 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 KATNAL1Q9BW62 490 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 ZNF436Q9C0F3 470 aaPredicted RBP9.39□□□□□ -0.91
VPS8-225ENST00000492449 MED28Q9H204 178 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 HHATLQ9HCP6 504 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 RGS18Q9NS28 235 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 PLEKHB1Q9UF11 243 aaPredicted RBP9.39□□□□□ -0.91
VPS8-225ENST00000492449 EPHA6Q9UF33 1036 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 RGS17Q9UGC6 210 aaPredicted RBP9.39□□□□□ -0.91
VPS8-225ENST00000492449 PCOLCE2Q9UKZ9 415 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 CLCA3PQ9Y6N3 262 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 SHROOM3Q8TF72 1996 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 A0A1B0GVI7 797 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 A0A1W2PQL4 384 aaPredicted RBP9.39□□□□□ -0.91
VPS8-225ENST00000492449 C2orf81A6NN90 581 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 KCNQ2O43526 872 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 MMP20O60882 483 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 EPOP01588 193 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 UROSP10746 265 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 SLC2A2P11168 524 aaPredicted RBP9.39□□□□□ -0.91
VPS8-225ENST00000492449 STOMP27105 288 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 BAG6P46379 1132 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 CLCN7P51798 805 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 DCDC1P59894 354 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 C6orf136Q5SQH8 315 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 HECTD2Q5U5R9 776 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 FAM160B1Q5W0V3 765 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 ESRP1Q6NXG1 681 aaKnown RBP9.39□□□□□ -0.91
VPS8-225ENST00000492449 SLC27A4Q6P1M0 643 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 ZNF549Q6P9A3 640 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 HSD17B13Q7Z5P4 300 aaPredicted RBP9.39□□□□□ -0.91
VPS8-225ENST00000492449 TRIM69Q86WT6 500 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 ZNF655Q8N720 491 aaPredicted RBP9.39□□□□□ -0.91
VPS8-225ENST00000492449 UXS1Q8NBZ7 420 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 OR11H7Q8NGC8 314 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 OR2T11Q8NH01 316 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 CHURC1Q8WUH1 139 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 PHF21AQ96BD5 680 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 SCMH1Q96GD3 660 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 OR5M11Q96RB7 305 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 TMEM175Q9BSA9 504 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 MED18Q9BUE0 208 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 TTYH1Q9H313 450 aaPredicted RBP9.39□□□□□ -0.91
VPS8-225ENST00000492449 ACTL8Q9H568 366 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 SLC28A3Q9HAS3 691 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms