RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 TRBV5-4A0A0C4DH59 114 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 A0A1W2PPR1 153 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 C5orf60A6NFR6 353 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 LRRC53A6NM62 1247 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 MYO1FO00160 1098 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 SYT5O00445 386 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 APOL1O14791 398 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 KDM1AO60341 852 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 ANXA5P08758 320 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 MC4RP32245 332 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 ZNF140P52738 457 aaPredicted RBP8.6□□□□□ -1.03
SSBP1-212ENST00000489378 ITGA8P53708 1063 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 CSE1LP55060 971 aaKnown RBP8.6□□□□□ -1.03
SSBP1-212ENST00000489378 TNP2Q05952 138 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 MESDQ14696 234 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 EXT1Q16394 746 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 MINDY4Q4G0A6 757 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 MFSD4BQ5TF39 518 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 FBXO42Q6P3S6 717 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 ZNF585AQ6P3V2 769 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 LRRC8BQ6P9F7 803 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 FIGNL1Q6PIW4 674 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 B3GNT6Q6ZMB0 384 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 TAS2R42Q7RTR8 314 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 P3H2Q8IVL5 708 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 PIANPQ8IYJ0 282 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 ARHGEF39Q8N4T4 335 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 CSNK1A1LQ8N752 337 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 PLPP7Q8NBV4 271 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 SREK1Q8WXA9 508 aaKnown RBP8.6□□□□□ -1.03
SSBP1-212ENST00000489378 MVB12AQ96EY5 273 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 FCRL5Q96RD9 977 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 APOL2Q9BQE5 337 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 ATG10Q9H0Y0 220 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 KLK4Q9Y5K2 254 aa8.6□□□□□ -1.03
SSBP1-212ENST00000489378 A0A0U1RQJ8 604 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 LRRD1A4D1F6 860 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 KRT87PA6NCN2 255 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 SOWAHDA6NJG2 315 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 C3orf70A6NLC5 250 aaPredicted RBP8.59□□□□□ -1.03
SSBP1-212ENST00000489378 NDC80O14777 642 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 PEX1O43933 1283 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 AP2A2O94973 939 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 CYP1A2P05177 515 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 SKILP12757 684 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 TACR1P25103 407 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 ARHGAP25P42331 645 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 CYB561P49447 251 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 DYNLT1P63172 113 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 TYRO3Q06418 890 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 MPP3Q13368 585 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 MSLNQ13421 630 aaPredicted RBP8.59□□□□□ -1.03
SSBP1-212ENST00000489378 GPR33Q49SQ1 333 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 SYTL3Q4VX76 610 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 DNAJC21Q5F1R6 531 aaKnown RBP8.59□□□□□ -1.03
SSBP1-212ENST00000489378 PAQR7Q86WK9 346 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 RPS19BP1Q86WX3 136 aaKnown RBP8.59□□□□□ -1.03
SSBP1-212ENST00000489378 VRK3Q8IV63 474 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 LGI4Q8N135 537 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 ZNF567Q8N184 647 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 KIF2BQ8N4N8 673 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 ZFP62Q8NB50 900 aaPredicted RBP8.59□□□□□ -1.03
SSBP1-212ENST00000489378 OR2L3Q8NG85 312 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 CFAP61Q8NHU2 1237 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 ENOX1Q8TC92 643 aaKnown RBP8.59□□□□□ -1.03
SSBP1-212ENST00000489378 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.59□□□□□ -1.03
SSBP1-212ENST00000489378 TMEM158Q8WZ71 300 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 BDH2Q9BUT1 245 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 SARGQ9BW04 601 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 FSD1LQ9BXM9 530 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 TRIM45Q9H8W5 580 aaPredicted RBP8.59□□□□□ -1.03
SSBP1-212ENST00000489378 SMARCAL1Q9NZC9 954 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 KLHL8Q9P2G9 620 aaPredicted RBP8.59□□□□□ -1.03
SSBP1-212ENST00000489378 IMPACTQ9P2X3 320 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 SAE1Q9UBE0 346 aaPredicted RBP8.59□□□□□ -1.03
SSBP1-212ENST00000489378 C19orf25Q9UFG5 118 aaPredicted RBP8.59□□□□□ -1.03
SSBP1-212ENST00000489378 MYO6Q9UM54 1294 aa8.59□□□□□ -1.03
SSBP1-212ENST00000489378 KLF13Q9Y2Y9 288 aaPredicted RBP8.59□□□□□ -1.03
SSBP1-212ENST00000489378 A0A1W2PNR3 127 aa8.58□□□□□ -1.04
SSBP1-212ENST00000489378 OR2A25A4D2G3 310 aa8.58□□□□□ -1.04
SSBP1-212ENST00000489378 GNB5O14775 395 aa8.58□□□□□ -1.04
SSBP1-212ENST00000489378 FKBP9O95302 570 aa8.58□□□□□ -1.04
SSBP1-212ENST00000489378 FTH1P02794 183 aa8.58□□□□□ -1.04
SSBP1-212ENST00000489378 PEX19P40855 299 aa8.58□□□□□ -1.04
SSBP1-212ENST00000489378 HLCSP50747 726 aa8.58□□□□□ -1.04
SSBP1-212ENST00000489378 TAS2R50P59544 299 aa8.58□□□□□ -1.04
SSBP1-212ENST00000489378 GPR85P60893 370 aa8.58□□□□□ -1.04
SSBP1-212ENST00000489378 SFT2D3Q587I9 215 aa8.58□□□□□ -1.04
SSBP1-212ENST00000489378 PAPD4Q6PIY7 484 aaKnown RBP8.58□□□□□ -1.04
SSBP1-212ENST00000489378 PID1Q7Z2X4 250 aa8.58□□□□□ -1.04
SSBP1-212ENST00000489378 DCUN1D3Q8IWE4 304 aa8.58□□□□□ -1.04
SSBP1-212ENST00000489378 RELL2Q8NC24 303 aaPredicted RBP8.58□□□□□ -1.04
SSBP1-212ENST00000489378 OR2A1Q8NGT9 310 aa8.58□□□□□ -1.04
SSBP1-212ENST00000489378 DNAJC1Q96KC8 554 aaKnown RBP8.58□□□□□ -1.04
SSBP1-212ENST00000489378 SH3GL2Q99962 352 aa8.58□□□□□ -1.04
SSBP1-212ENST00000489378 GORASP1Q9BQQ3 440 aa8.58□□□□□ -1.04
SSBP1-212ENST00000489378 DRC3Q9H069 523 aa8.58□□□□□ -1.04
SSBP1-212ENST00000489378 LIMA1Q9UHB6 759 aaKnown RBP8.58□□□□□ -1.04
SSBP1-212ENST00000489378 SLC39A10Q9ULF5 831 aa8.58□□□□□ -1.04
SSBP1-212ENST00000489378 SCN3AQ9NY46 2000 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms