RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 C5AR2Q9P296 337 aa23.73■■□□□ 1.39
HMGN1-217ENST00000489072 MTO1Q9Y2Z2 717 aaKnown RBP23.73■■□□□ 1.39
HMGN1-217ENST00000489072 COL12A1Q99715 3063 aa23.73■■□□□ 1.39
HMGN1-217ENST00000489072 TCRBV9S1A1TA0A576 114 aa23.72■■□□□ 1.39
HMGN1-217ENST00000489072 PRPF4O43172 522 aaKnown RBP eCLIP23.72■■□□□ 1.39
HMGN1-217ENST00000489072 ANXA5P08758 320 aa23.72■■□□□ 1.39
HMGN1-217ENST00000489072 MAT1AQ00266 395 aaKnown RBP23.72■■□□□ 1.39
HMGN1-217ENST00000489072 MEF2AQ02078 507 aaPredicted RBP23.72■■□□□ 1.39
HMGN1-217ENST00000489072 TUBB8Q3ZCM7 444 aa23.72■■□□□ 1.39
HMGN1-217ENST00000489072 SLC6A19Q695T7 634 aa23.72■■□□□ 1.39
HMGN1-217ENST00000489072 PRSS41Q7RTY9 318 aa23.72■■□□□ 1.39
HMGN1-217ENST00000489072 SHISA5Q8N114 240 aa23.72■■□□□ 1.39
HMGN1-217ENST00000489072 Q8NA96 180 aa23.72■■□□□ 1.39
HMGN1-217ENST00000489072 ABHD11Q8NFV4 315 aa23.72■■□□□ 1.39
HMGN1-217ENST00000489072 OR9A4Q8NGU2 314 aa23.72■■□□□ 1.39
HMGN1-217ENST00000489072 ATL1Q8WXF7 558 aa23.72■■□□□ 1.39
HMGN1-217ENST00000489072 ANKRD7Q92527 254 aa23.72■■□□□ 1.39
HMGN1-217ENST00000489072 C8orf44Q96CB5 159 aa23.72■■□□□ 1.39
HMGN1-217ENST00000489072 RAB17Q9H0T7 212 aa23.72■■□□□ 1.39
HMGN1-217ENST00000489072 CAB39LQ9H9S4 337 aa23.72■■□□□ 1.39
HMGN1-217ENST00000489072 MAP4K5Q9Y4K4 846 aa23.72■■□□□ 1.39
HMGN1-217ENST00000489072 FAM159BA6NKW6 160 aa23.71■■□□□ 1.39
HMGN1-217ENST00000489072 TTLL8A6PVC2 850 aa23.71■■□□□ 1.39
HMGN1-217ENST00000489072 WISP3O95389 354 aaPredicted RBP23.71■■□□□ 1.39
HMGN1-217ENST00000489072 ITGA3P26006 1051 aa23.71■■□□□ 1.39
HMGN1-217ENST00000489072 NDUFA9Q16795 377 aa23.71■■□□□ 1.39
HMGN1-217ENST00000489072 ATG9BQ674R7 924 aa23.71■■□□□ 1.39
HMGN1-217ENST00000489072 TMEM214Q6NUQ4 689 aaKnown RBP23.71■■□□□ 1.39
HMGN1-217ENST00000489072 C3orf62Q6ZUJ4 267 aa23.71■■□□□ 1.39
HMGN1-217ENST00000489072 CYS1Q717R9 158 aa23.71■■□□□ 1.39
HMGN1-217ENST00000489072 ZC3H7AQ8IWR0 971 aaKnown RBP23.71■■□□□ 1.39
HMGN1-217ENST00000489072 OR4K1Q8NGD4 311 aa23.71■■□□□ 1.39
HMGN1-217ENST00000489072 C16orf45Q96MC5 204 aaPredicted RBP23.71■■□□□ 1.39
HMGN1-217ENST00000489072 PHACTR1Q9C0D0 580 aa23.71■■□□□ 1.39
HMGN1-217ENST00000489072 POPDC3Q9HBV1 291 aa23.71■■□□□ 1.39
HMGN1-217ENST00000489072 ZBTB20Q9HC78 741 aaPredicted RBP23.71■■□□□ 1.39
HMGN1-217ENST00000489072 GPAMQ9HCL2 828 aa23.71■■□□□ 1.39
HMGN1-217ENST00000489072 MKKSQ9NPJ1 570 aaPredicted RBP23.71■■□□□ 1.39
HMGN1-217ENST00000489072 C14orf105Q9NVL8 296 aa23.71■■□□□ 1.39
HMGN1-217ENST00000489072 IDSB3KWA1 339 aa23.7■■□□□ 1.38
HMGN1-217ENST00000489072 CCR8P51685 355 aa23.7■■□□□ 1.38
HMGN1-217ENST00000489072 EFNA3P52797 238 aa23.7■■□□□ 1.38
HMGN1-217ENST00000489072 POU4F1Q01851 419 aa23.7■■□□□ 1.38
HMGN1-217ENST00000489072 CAV1Q03135 178 aa23.7■■□□□ 1.38
HMGN1-217ENST00000489072 Q0VFX4 171 aa23.7■■□□□ 1.38
HMGN1-217ENST00000489072 TSNQ15631 228 aaKnown RBP23.7■■□□□ 1.38
HMGN1-217ENST00000489072 CATSPEREQ5SY80 951 aa23.7■■□□□ 1.38
HMGN1-217ENST00000489072 ASPGQ86U10 573 aa23.7■■□□□ 1.38
HMGN1-217ENST00000489072 CCDC25Q86WR0 208 aa23.7■■□□□ 1.38
HMGN1-217ENST00000489072 PARP9Q8IXQ6 854 aa23.7■■□□□ 1.38
HMGN1-217ENST00000489072 PIAS4Q8N2W9 510 aaPredicted RBP23.7■■□□□ 1.38
HMGN1-217ENST00000489072 MFSD9Q8NBP5 474 aa23.7■■□□□ 1.38
HMGN1-217ENST00000489072 KCT2Q8NC54 265 aa23.7■■□□□ 1.38
HMGN1-217ENST00000489072 CAMKVQ8NCB2 501 aa23.7■■□□□ 1.38
HMGN1-217ENST00000489072 CDKL2Q92772 493 aa23.7■■□□□ 1.38
HMGN1-217ENST00000489072 NEIL2Q969S2 332 aa23.7■■□□□ 1.38
HMGN1-217ENST00000489072 TGIF2Q9GZN2 237 aa23.7■■□□□ 1.38
HMGN1-217ENST00000489072 SPNS1Q9H2V7 528 aa23.7■■□□□ 1.38
HMGN1-217ENST00000489072 USP9XQ93008 2570 aaPredicted RBP23.69■■□□□ 1.38
HMGN1-217ENST00000489072 NSA2O95478 260 aaKnown RBP23.69■■□□□ 1.38
HMGN1-217ENST00000489072 ALPPP05187 535 aa23.69■■□□□ 1.38
HMGN1-217ENST00000489072 GSTA2P09210 222 aa23.69■■□□□ 1.38
HMGN1-217ENST00000489072 ACPPP15309 386 aa23.69■■□□□ 1.38
HMGN1-217ENST00000489072 IL1RNP18510 177 aa23.69■■□□□ 1.38
HMGN1-217ENST00000489072 GRK3P35626 688 aa23.69■■□□□ 1.38
HMGN1-217ENST00000489072 AVPR1BP47901 424 aa23.69■■□□□ 1.38
HMGN1-217ENST00000489072 EMP2P54851 167 aa23.69■■□□□ 1.38
HMGN1-217ENST00000489072 SLC7A5Q01650 507 aa23.69■■□□□ 1.38
HMGN1-217ENST00000489072 IGFL3Q6UXB1 125 aa23.69■■□□□ 1.38
HMGN1-217ENST00000489072 ZNF740Q8NDX6 193 aa23.69■■□□□ 1.38
HMGN1-217ENST00000489072 ZCCHC10Q8TBK6 192 aa23.69■■□□□ 1.38
HMGN1-217ENST00000489072 SLC13A3Q8WWT9 602 aa23.69■■□□□ 1.38
HMGN1-217ENST00000489072 PNPLA2Q96AD5 504 aa23.69■■□□□ 1.38
HMGN1-217ENST00000489072 TSNARE1Q96NA8 513 aa23.69■■□□□ 1.38
HMGN1-217ENST00000489072 RBBP8Q99708 897 aa23.69■■□□□ 1.38
HMGN1-217ENST00000489072 CPNE1Q99829 537 aa23.69■■□□□ 1.38
HMGN1-217ENST00000489072 SARGQ9BW04 601 aa23.69■■□□□ 1.38
HMGN1-217ENST00000489072 UNKQ9C0B0 810 aaKnown RBP23.69■■□□□ 1.38
HMGN1-217ENST00000489072 CTNNAL1Q9UBT7 734 aa23.69■■□□□ 1.38
HMGN1-217ENST00000489072 OARD1Q9Y530 152 aa23.69■■□□□ 1.38
HMGN1-217ENST00000489072 ESYT3A0FGR9 886 aa23.68■■□□□ 1.38
HMGN1-217ENST00000489072 MAP2K7O14733 419 aa23.68■■□□□ 1.38
HMGN1-217ENST00000489072 MAGEA4P43358 317 aa23.68■■□□□ 1.38
HMGN1-217ENST00000489072 CDKL1Q00532 357 aa23.68■■□□□ 1.38
HMGN1-217ENST00000489072 CKAP4Q07065 602 aaKnown RBP23.68■■□□□ 1.38
HMGN1-217ENST00000489072 ILF2Q12905 390 aaKnown RBP23.68■■□□□ 1.38
HMGN1-217ENST00000489072 PRR30Q53SZ7 412 aaPredicted RBP23.68■■□□□ 1.38
HMGN1-217ENST00000489072 THOC6Q86W42 341 aaKnown RBP23.68■■□□□ 1.38
HMGN1-217ENST00000489072 SPATA6LQ8N4H0 392 aa23.68■■□□□ 1.38
HMGN1-217ENST00000489072 CPT1CQ8TCG5 803 aa23.68■■□□□ 1.38
HMGN1-217ENST00000489072 SLC5A11Q8WWX8 675 aa23.68■■□□□ 1.38
HMGN1-217ENST00000489072 VPS50Q96JG6 964 aa23.68■■□□□ 1.38
HMGN1-217ENST00000489072 GPR22Q99680 433 aa23.68■■□□□ 1.38
HMGN1-217ENST00000489072 ZNF160Q9HCG1 818 aa23.68■■□□□ 1.38
HMGN1-217ENST00000489072 LRRC4CQ9HCJ2 640 aa23.68■■□□□ 1.38
HMGN1-217ENST00000489072 DOPEY2Q9Y3R5 2298 aa23.68■■□□□ 1.38
HMGN1-217ENST00000489072 TRBC2A0A5B9 178 aa23.67■■□□□ 1.38
HMGN1-217ENST00000489072 H0YIG0 161 aa23.67■■□□□ 1.38
HMGN1-217ENST00000489072 PHGDHO43175 533 aaKnown RBP23.67■■□□□ 1.38
HMGN1-217ENST00000489072 KLHL41O60662 606 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms