RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 ASB14A6NK59 587 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 K7EQD1 137 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 P4HA2O15460 535 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 SNAP91O60641 907 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 FYNP06241 537 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 MYBL1P10243 752 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 F3P13726 295 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 CD59P13987 128 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 DUTP33316 252 aaKnown RBP2.96□□□□□ -1.94
RFC4-213ENST00000489028 ETV5P41161 510 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 DLK1P80370 383 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 PSMD6Q15008 389 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 KYNUQ16719 465 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 CPEB2Q7Z5Q1 589 aaKnown RBP2.96□□□□□ -1.94
RFC4-213ENST00000489028 ZER1Q7Z7L7 766 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 SLC47A2Q86VL8 602 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 ZFAND4Q86XD8 727 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 ERC1Q8IUD2 1116 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 RCOR2Q8IZ40 523 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 GPC2Q8N158 579 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 RYBPQ8N488 228 aaPredicted RBP2.96□□□□□ -1.94
RFC4-213ENST00000489028 OR6J1Q8NGC5 347 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 OR5T2Q8NGG2 359 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 C9orf43Q8TAL5 461 aaPredicted RBP2.96□□□□□ -1.94
RFC4-213ENST00000489028 RASL10AQ92737 203 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 TSACCQ96A04 125 aaPredicted RBP2.96□□□□□ -1.94
RFC4-213ENST00000489028 SLC45A3Q96JT2 553 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 CFAP57Q96MR6 1250 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 AP1M1Q9BXS5 423 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 PARLQ9H300 379 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 PANK3Q9H999 370 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 PHPT1Q9NRX4 125 aaPredicted RBP2.96□□□□□ -1.94
RFC4-213ENST00000489028 CTSZQ9UBR2 303 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 CFDP1Q9UEE9 299 aaPredicted RBP2.96□□□□□ -1.94
RFC4-213ENST00000489028 AGRNO00468 2067 aa2.96□□□□□ -1.94
RFC4-213ENST00000489028 ZNF318Q5VUA4 2279 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 ABCA7Q8IZY2 2146 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 C17orf105B2RV13 164 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 CCER2I3L3R5 266 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 RTCAO00442 366 aaKnown RBP2.95□□□□□ -1.94
RFC4-213ENST00000489028 NXPH4O95158 308 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 DNTTP04053 509 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 MYOGP15173 224 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 EEF1B2P24534 225 aaKnown RBP2.95□□□□□ -1.94
RFC4-213ENST00000489028 PGFP49763 221 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 CLCN4P51793 760 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 LIMK2P53671 638 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 MZT1Q08AG7 82 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 RIGQ13278 110 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 SGCGQ13326 291 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 LBHQ53QV2 105 aaPredicted RBP2.95□□□□□ -1.94
RFC4-213ENST00000489028 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 SLC30A6Q6NXT4 461 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 CYB5D1Q6P9G0 228 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 CHMP1BQ7LBR1 199 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 ABHD12Q8N2K0 398 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 LINC00612Q8N6U2 182 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 POM121L12Q8N7R1 296 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 OR2L2Q8NH16 312 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 PDLIM5Q96HC4 596 aaKnown RBP2.95□□□□□ -1.94
RFC4-213ENST00000489028 NEDD4LQ96PU5 975 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 GAL3ST4Q96RP7 486 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 LGMNQ99538 433 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 FAM129AQ9BZQ8 928 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 ACTL8Q9H568 366 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 MTHFD2LQ9H903 347 aaPredicted RBP2.95□□□□□ -1.94
RFC4-213ENST00000489028 TBC1D13Q9NVG8 400 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.95□□□□□ -1.94
RFC4-213ENST00000489028 SELENOKQ9Y6D0 94 aa2.95□□□□□ -1.94
RFC4-213ENST00000489028 IGHV4-30-2A0A087WSY4 118 aa2.94□□□□□ -1.94
RFC4-213ENST00000489028 A0A1W2PRQ8 180 aa2.94□□□□□ -1.94
RFC4-213ENST00000489028 A8MXK9 166 aa2.94□□□□□ -1.94
RFC4-213ENST00000489028 TFECO14948 347 aaPredicted RBP2.94□□□□□ -1.94
RFC4-213ENST00000489028 SURF4O15260 269 aa2.94□□□□□ -1.94
RFC4-213ENST00000489028 DKC1O60832 514 aaKnown RBP eCLIP2.94□□□□□ -1.94
RFC4-213ENST00000489028 TCF4P15884 667 aa2.94□□□□□ -1.94
RFC4-213ENST00000489028 MTCP1P56278 107 aa2.94□□□□□ -1.94
RFC4-213ENST00000489028 DHODHQ02127 395 aa2.94□□□□□ -1.94
RFC4-213ENST00000489028 ILF2Q12905 390 aaKnown RBP2.94□□□□□ -1.94
RFC4-213ENST00000489028 CST9LP1Q5W188 147 aa2.94□□□□□ -1.94
RFC4-213ENST00000489028 RPUSD3Q6P087 351 aaKnown RBP2.94□□□□□ -1.94
RFC4-213ENST00000489028 LCLAT1Q6UWP7 414 aa2.94□□□□□ -1.94
RFC4-213ENST00000489028 FAM131BQ86XD5 332 aa2.94□□□□□ -1.94
RFC4-213ENST00000489028 FAM219AQ8IW50 185 aa2.94□□□□□ -1.94
RFC4-213ENST00000489028 TCEANCQ8N8B7 351 aa2.94□□□□□ -1.94
RFC4-213ENST00000489028 EXT2Q93063 718 aa2.94□□□□□ -1.94
RFC4-213ENST00000489028 PYCR2Q96C36 320 aa2.94□□□□□ -1.94
RFC4-213ENST00000489028 BTBD9Q96Q07 612 aa2.94□□□□□ -1.94
RFC4-213ENST00000489028 BAG1Q99933 345 aaPredicted RBP2.94□□□□□ -1.94
RFC4-213ENST00000489028 TXLNGYQ9BZA5 131 aa2.94□□□□□ -1.94
RFC4-213ENST00000489028 SDCBP2Q9H190 292 aa2.94□□□□□ -1.94
RFC4-213ENST00000489028 XAB2Q9HCS7 855 aaKnown RBP2.94□□□□□ -1.94
RFC4-213ENST00000489028 SLC7A10Q9NS82 523 aa2.94□□□□□ -1.94
RFC4-213ENST00000489028 HACD3Q9P035 362 aa2.94□□□□□ -1.94
RFC4-213ENST00000489028 NFKBIL1Q9UBC1 381 aaPredicted RBP2.94□□□□□ -1.94
RFC4-213ENST00000489028 POLLQ9UGP5 575 aa2.94□□□□□ -1.94
RFC4-213ENST00000489028 LNPEPQ9UIQ6 1025 aa2.94□□□□□ -1.94
RFC4-213ENST00000489028 NEDD4P46934 1319 aa2.93□□□□□ -1.94
RFC4-213ENST00000489028 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.93□□□□□ -1.94
RFC4-213ENST00000489028 IGHV3-20A0A0C4DH32 117 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms