RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 CAV1Q03135 178 aa16.85■□□□□ 0.29
ITGB1-215ENST00000488494 TRADDQ15628 312 aa16.85■□□□□ 0.29
ITGB1-215ENST00000488494 SYT16Q17RD7 645 aa16.85■□□□□ 0.29
ITGB1-215ENST00000488494 SLC6A19Q695T7 634 aa16.85■□□□□ 0.29
ITGB1-215ENST00000488494 JMJD6Q6NYC1 403 aaPredicted RBP16.85■□□□□ 0.29
ITGB1-215ENST00000488494 ZDHHC24Q6UX98 284 aa16.85■□□□□ 0.29
ITGB1-215ENST00000488494 PRSS41Q7RTY9 318 aa16.85■□□□□ 0.29
ITGB1-215ENST00000488494 ASPGQ86U10 573 aa16.85■□□□□ 0.29
ITGB1-215ENST00000488494 ZC3H7AQ8IWR0 971 aaKnown RBP16.85■□□□□ 0.29
ITGB1-215ENST00000488494 RBMXL3Q8N7X1 1067 aaKnown RBP16.85■□□□□ 0.29
ITGB1-215ENST00000488494 OR9A4Q8NGU2 314 aa16.85■□□□□ 0.29
ITGB1-215ENST00000488494 C8orf44Q96CB5 159 aa16.85■□□□□ 0.29
ITGB1-215ENST00000488494 THAP11Q96EK4 314 aa16.85■□□□□ 0.29
ITGB1-215ENST00000488494 PHACTR1Q9C0D0 580 aa16.85■□□□□ 0.29
ITGB1-215ENST00000488494 CAB39LQ9H9S4 337 aa16.85■□□□□ 0.29
ITGB1-215ENST00000488494 POPDC3Q9HBV1 291 aa16.85■□□□□ 0.29
ITGB1-215ENST00000488494 GPAMQ9HCL2 828 aa16.85■□□□□ 0.29
ITGB1-215ENST00000488494 MKKSQ9NPJ1 570 aaPredicted RBP16.85■□□□□ 0.29
ITGB1-215ENST00000488494 TXNDC16Q9P2K2 825 aa16.85■□□□□ 0.29
ITGB1-215ENST00000488494 MAP4K5Q9Y4K4 846 aa16.85■□□□□ 0.29
ITGB1-215ENST00000488494 ESYT3A0FGR9 886 aa16.84■□□□□ 0.29
ITGB1-215ENST00000488494 FAM159BA6NKW6 160 aa16.84■□□□□ 0.29
ITGB1-215ENST00000488494 IDSB3KWA1 339 aa16.84■□□□□ 0.29
ITGB1-215ENST00000488494 IL1RNP18510 177 aa16.84■□□□□ 0.29
ITGB1-215ENST00000488494 AVPR1BP47901 424 aa16.84■□□□□ 0.29
ITGB1-215ENST00000488494 GPX6P59796 221 aa16.84■□□□□ 0.29
ITGB1-215ENST00000488494 FAM53BQ14153 422 aa16.84■□□□□ 0.29
ITGB1-215ENST00000488494 TSNQ15631 228 aaKnown RBP16.84■□□□□ 0.29
ITGB1-215ENST00000488494 TMEM214Q6NUQ4 689 aaKnown RBP16.84■□□□□ 0.29
ITGB1-215ENST00000488494 C8orf74Q6P047 294 aa16.84■□□□□ 0.29
ITGB1-215ENST00000488494 FRA10AC1Q70Z53 315 aa16.84■□□□□ 0.29
ITGB1-215ENST00000488494 LAPTM4BQ86VI4 370 aa16.84■□□□□ 0.29
ITGB1-215ENST00000488494 ABHD11Q8NFV4 315 aa16.84■□□□□ 0.29
ITGB1-215ENST00000488494 NEIL2Q969S2 332 aa16.84■□□□□ 0.29
ITGB1-215ENST00000488494 VPS50Q96JG6 964 aa16.84■□□□□ 0.29
ITGB1-215ENST00000488494 RBBP8Q99708 897 aa16.84■□□□□ 0.29
ITGB1-215ENST00000488494 CPNE1Q99829 537 aa16.84■□□□□ 0.29
ITGB1-215ENST00000488494 EGFL8Q99944 293 aa16.84■□□□□ 0.29
ITGB1-215ENST00000488494 UNKQ9C0B0 810 aaKnown RBP16.84■□□□□ 0.29
ITGB1-215ENST00000488494 ZNF552Q9H707 407 aaPredicted RBP16.84■□□□□ 0.29
ITGB1-215ENST00000488494 ZNF160Q9HCG1 818 aa16.84■□□□□ 0.29
ITGB1-215ENST00000488494 C5AR2Q9P296 337 aa16.84■□□□□ 0.29
ITGB1-215ENST00000488494 MTO1Q9Y2Z2 717 aaKnown RBP16.84■□□□□ 0.29
ITGB1-215ENST00000488494 PHGDHO43175 533 aaKnown RBP16.83■□□□□ 0.28
ITGB1-215ENST00000488494 LCMT2O60294 686 aaKnown RBP16.83■□□□□ 0.28
ITGB1-215ENST00000488494 IPO13O94829 963 aaKnown RBP16.83■□□□□ 0.28
ITGB1-215ENST00000488494 HPP00738 406 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 SLC35G6P0C7Q6 338 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 GP5P40197 560 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 SOX8P57073 446 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 SLC7A5Q01650 507 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 POU4F1Q01851 419 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 EEF1A2Q05639 463 aaKnown RBP16.83■□□□□ 0.28
ITGB1-215ENST00000488494 ILF2Q12905 390 aaKnown RBP16.83■□□□□ 0.28
ITGB1-215ENST00000488494 PRR30Q53SZ7 412 aaPredicted RBP16.83■□□□□ 0.28
ITGB1-215ENST00000488494 CATSPEREQ5SY80 951 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 IRAK1BP1Q5VVH5 260 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 FAAH2Q6GMR7 532 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 C3orf62Q6ZUJ4 267 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 ADAMTSL2Q86TH1 951 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 CTAGE3PQ8IX95 158 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 PARP9Q8IXQ6 854 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 Q8NA96 180 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 MFSD9Q8NBP5 474 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 KCT2Q8NC54 265 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 CAMKVQ8NCB2 501 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 CPT1CQ8TCG5 803 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 SLC13A3Q8WWT9 602 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 SLC5A11Q8WWX8 675 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 ANKRD7Q92527 254 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 PNPLA2Q96AD5 504 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 TSPAN17Q96FV3 270 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 HCN3Q9P1Z3 774 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 CTNNAL1Q9UBT7 734 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 OARD1Q9Y530 152 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 RELNP78509 3460 aa16.83■□□□□ 0.28
ITGB1-215ENST00000488494 COL12A1Q99715 3063 aa16.82■□□□□ 0.28
ITGB1-215ENST00000488494 NDUFS4O43181 175 aa16.82■□□□□ 0.28
ITGB1-215ENST00000488494 OR1F1O43749 312 aa16.82■□□□□ 0.28
ITGB1-215ENST00000488494 KLHL41O60662 606 aa16.82■□□□□ 0.28
ITGB1-215ENST00000488494 URI1O94763 535 aaPredicted RBP16.82■□□□□ 0.28
ITGB1-215ENST00000488494 NSA2O95478 260 aaKnown RBP16.82■□□□□ 0.28
ITGB1-215ENST00000488494 C1QAP02745 245 aa16.82■□□□□ 0.28
ITGB1-215ENST00000488494 HEXBP07686 556 aa16.82■□□□□ 0.28
ITGB1-215ENST00000488494 GSTA2P09210 222 aa16.82■□□□□ 0.28
ITGB1-215ENST00000488494 COX6A1P12074 109 aa16.82■□□□□ 0.28
ITGB1-215ENST00000488494 EMP2P54851 167 aa16.82■□□□□ 0.28
ITGB1-215ENST00000488494 CDKL1Q00532 357 aa16.82■□□□□ 0.28
ITGB1-215ENST00000488494 Q0VFX4 171 aa16.82■□□□□ 0.28
ITGB1-215ENST00000488494 USP10Q14694 798 aaKnown RBP16.82■□□□□ 0.28
ITGB1-215ENST00000488494 TMPRSS11BQ86T26 416 aa16.82■□□□□ 0.28
ITGB1-215ENST00000488494 THOC6Q86W42 341 aaKnown RBP16.82■□□□□ 0.28
ITGB1-215ENST00000488494 ATCAYQ86WG3 371 aa16.82■□□□□ 0.28
ITGB1-215ENST00000488494 SPATA6LQ8N4H0 392 aa16.82■□□□□ 0.28
ITGB1-215ENST00000488494 EFCAB3Q8N7B9 438 aa16.82■□□□□ 0.28
ITGB1-215ENST00000488494 ZNF740Q8NDX6 193 aa16.82■□□□□ 0.28
ITGB1-215ENST00000488494 TM9SF4Q92544 642 aa16.82■□□□□ 0.28
ITGB1-215ENST00000488494 TM4SF19Q96DZ7 209 aa16.82■□□□□ 0.28
ITGB1-215ENST00000488494 GPR22Q99680 433 aa16.82■□□□□ 0.28
ITGB1-215ENST00000488494 FAM129AQ9BZQ8 928 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms