RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 BPHLQ86WA6 291 aaPredicted RBP10.55□□□□□ -0.72
UBE4B-210ENST00000488228 MYLK4Q86YV6 388 aaPredicted RBP10.55□□□□□ -0.72
UBE4B-210ENST00000488228 ANKRD53Q8N9V6 530 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 CCDC63Q8NA47 563 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 TTC29Q8NA56 475 aaPredicted RBP10.55□□□□□ -0.72
UBE4B-210ENST00000488228 MFSD9Q8NBP5 474 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 ARMC2Q8NEN0 867 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 OR4K1Q8NGD4 311 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 ZCCHC10Q8TBK6 192 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 RERGQ96A58 199 aaPredicted RBP10.55□□□□□ -0.72
UBE4B-210ENST00000488228 CLIP3Q96DZ5 547 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 MOCOSQ96EN8 888 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 FAM111AQ96PZ2 611 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 AIF1LQ9BQI0 150 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 SPRY4Q9C004 299 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 SLC7A5P2Q9GIP4 190 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 SEMA4BQ9NPR2 832 aaPredicted RBP10.55□□□□□ -0.72
UBE4B-210ENST00000488228 DHCR7Q9UBM7 475 aaKnown RBP10.55□□□□□ -0.72
UBE4B-210ENST00000488228 SERTAD3Q9UJW9 196 aa10.55□□□□□ -0.72
UBE4B-210ENST00000488228 MRPS2Q9Y399 296 aaKnown RBP10.55□□□□□ -0.72
UBE4B-210ENST00000488228 TNPO3Q9Y5L0 923 aaKnown RBP10.55□□□□□ -0.72
UBE4B-210ENST00000488228 LAMA5O15230 3695 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 OR7A17O14581 309 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 NDUFS4O43181 175 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 SERPIND1P05546 499 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 C1GALT1C1LP0DN25 315 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 ITGAXP20702 1163 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 RORAP35398 523 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 ARL1P40616 181 aaPredicted RBP10.54□□□□□ -0.72
UBE4B-210ENST00000488228 SCTRP47872 440 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 HERVK_113P63132 956 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 IRF8Q02556 426 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 TRAF3Q13114 568 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 GRM7Q14831 915 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 PCLAFQ15004 111 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 RBBP5Q15291 538 aaKnown RBP10.54□□□□□ -0.72
UBE4B-210ENST00000488228 RBBP7Q16576 425 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 PRTGQ2VWP7 1150 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 CCDC153Q494R4 210 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 TNFAIP8L3Q5GJ75 292 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 TCTE1Q5JU00 501 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 TLDC1Q6P9B6 456 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 C6orf15Q6UXA7 325 aaPredicted RBP10.54□□□□□ -0.72
UBE4B-210ENST00000488228 TTLL10Q6ZVT0 673 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 ASPGQ86U10 573 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 DTX1Q86Y01 620 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 CACNA2D3Q8IZS8 1091 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 NLGN4XQ8N0W4 816 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 ZNF248Q8NDW4 579 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 NLGN4YQ8NFZ3 816 aaPredicted RBP10.54□□□□□ -0.72
UBE4B-210ENST00000488228 OR52B6Q8NGF0 335 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 TCP10LQ8TDR4 215 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 ZNF483Q8TF39 744 aaPredicted RBP10.54□□□□□ -0.72
UBE4B-210ENST00000488228 NKD1Q969G9 470 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 WDR34Q96EX3 536 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 PGM2Q96G03 612 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 CDK15Q96Q40 435 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 NDC1Q9BTX1 674 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 ERVK-6Q9BXR3 956 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 EHD1Q9H4M9 534 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 IPPKQ9H8X2 491 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 ACTR8Q9H981 624 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 AKIRIN1Q9H9L7 192 aaPredicted RBP10.54□□□□□ -0.72
UBE4B-210ENST00000488228 ZBTB26Q9HCK0 441 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 CUTCQ9NTM9 273 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 SENP1Q9P0U3 644 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 NDOR1Q9UHB4 597 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 GRID1Q9ULK0 1009 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 SRPK3Q9UPE1 567 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 PLLPQ9Y342 182 aa10.54□□□□□ -0.72
UBE4B-210ENST00000488228 A0A1B0GTL3 188 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 HYKKA2RU49 373 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 FITM1A5D6W6 292 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 GOLGA6L10A6NI86 522 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 AGPSO00116 658 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 PPP6CO00743 305 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 KLK10O43240 276 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 TYROBPO43914 113 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 SRPX2O60687 465 aaPredicted RBP10.53□□□□□ -0.72
UBE4B-210ENST00000488228 KATNA1O75449 491 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 SLC35G6P0C7Q6 338 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 EIF2S3P41091 472 aaKnown RBP10.53□□□□□ -0.72
UBE4B-210ENST00000488228 STAT5AP42229 794 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 CCR10P46092 362 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 PIK3CGP48736 1102 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 ATP1A2P50993 1020 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 PRKAA2P54646 552 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 CDH13P55290 713 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 RELAQ04206 551 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 UNC50Q53HI1 259 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 ZNF678Q5SXM1 525 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 ZNF385CQ66K41 422 aaPredicted RBP10.53□□□□□ -0.72
UBE4B-210ENST00000488228 LCN10Q6JVE6 187 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 RHBDD2Q6NTF9 364 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 FAM199XQ6PEV8 388 aaPredicted RBP10.53□□□□□ -0.72
UBE4B-210ENST00000488228 FAM198BQ6UWH4 519 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 TMIGD1Q6UXZ0 262 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 VN1R5Q7Z5H4 357 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 CROCCP2Q86T23 111 aa10.53□□□□□ -0.72
UBE4B-210ENST00000488228 EXOC3L1Q86VI1 746 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms