RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 FGF4P08620 206 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 PRR35P0CG20 571 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 SLC2A4P14672 509 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 HNRNPLP14866 589 aaKnown RBP eCLIP4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 PAMP19021 973 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 CYP2F1P24903 491 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 FMO3P31513 532 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 TNFSF8P32971 234 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 GRK5P34947 590 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 GLRBP48167 497 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 OR4D2P58180 307 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 IL5RAQ01344 420 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 GRAPQ13588 217 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 USP10Q14694 798 aaKnown RBP4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 PON2Q15165 354 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 QPRTQ15274 297 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 GPR19Q15760 415 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 TIGD6Q17RP2 521 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 KIF19Q2TAC6 998 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 COL28A1Q2UY09 1125 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 GLYR1Q49A26 553 aaPredicted RBP4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 FAM102BQ5T8I3 360 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 FCRLBQ6BAA4 426 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 SPESP1Q6UW49 350 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 HTR3DQ70Z44 454 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 DPP9Q86TI2 863 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 SLC22A9Q8IVM8 553 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 ADHFE1Q8IWW8 467 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 BBS7Q8IWZ6 715 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 OR8H2Q8N162 312 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 GHDCQ8N2G8 530 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 COLGALT1Q8NBJ5 622 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 RBPMSQ93062 196 aaKnown RBP4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 TRMT61AQ96FX7 289 aaKnown RBP4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 ATXN7L3BQ96GX2 97 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 ZSWIM3Q96MP5 696 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 ZFYVE21Q9BQ24 234 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 PELOQ9BRX2 385 aaKnown RBP4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 SNRNP25Q9BV90 132 aaKnown RBP4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 ZNF416Q9BWM5 594 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 MMP28Q9H239 520 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 GSTO2Q9H4Y5 243 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 CARS2Q9HA77 564 aaKnown RBP4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 IL1RL2Q9HB29 575 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 MCCC2Q9HCC0 563 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 FBRSL1Q9HCM7 1045 aaKnown RBP4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 CASS4Q9NQ75 786 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 PLCXD1Q9NUJ7 323 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 DCAF16Q9NXF7 216 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 COQ3Q9NZJ6 369 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 SRP68Q9UHB9 627 aaKnown RBP4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 ENOPH1Q9UHY7 261 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 LEF1Q9UJU2 399 aaPredicted RBP4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 NDRG4Q9ULP0 352 aaKnown RBP4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 JAG2Q9Y219 1238 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 ORC6Q9Y5N6 252 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 GPR45Q9Y5Y3 372 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 A0A0B4J203 849 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 CIB4A0PJX0 185 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 POLRMTO00411 1230 aaKnown RBP4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 BTN3A3O00478 584 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 ACKR2O00590 384 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 HS6ST1O60243 411 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 NOBOXO60393 691 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 HUS1O60921 280 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 FAM20BO75063 409 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 VPS4BO75351 444 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 WBP4O75554 376 aaKnown RBP4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 LDOC1O95751 146 aaPredicted RBP4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 AP2A1O95782 977 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 TGM6O95932 706 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 C1RP00736 705 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 CST1P01037 141 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 RPS3P23396 243 aaKnown RBP eCLIP4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 IGFBP5P24593 272 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 CDH8P55286 799 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 RRAS2P62070 204 aaPredicted RBP4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 SNRPD2P62316 118 aaKnown RBP4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 RUNX1T1Q06455 604 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 ELP6Q0PNE2 266 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 CDH17Q12864 832 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 SPP2Q13103 211 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 SLC14A2Q15849 920 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 BAK1Q16611 211 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 TATDN3Q17R31 274 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 ZNF792Q3KQV3 632 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 TIMM50Q3ZCQ8 353 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 KLHL12Q53G59 568 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 ALFQ53S48 1182 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 FAM209BQ5JX69 171 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 RAP1GAP2Q684P5 730 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 NCBP2-AS2Q69YL0 99 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 SHQ1Q6PI26 577 aaKnown RBP4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 CORO6Q6QEF8 472 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 FIP1L1Q6UN15 594 aaKnown RBP4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 KDELC1Q6UW63 502 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 LIPIQ6XZB0 460 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 CFAP77Q6ZQR2 320 aa4.6□□□□□ -1.67
CDC42BPA-213ENST00000488131 GPRIN3Q6ZVF9 776 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms