RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 OMA1Q96E52 524 aa3.41□□□□□ -1.86
TTC3-220ENST00000487711 SIPA1Q96FS4 1042 aa3.41□□□□□ -1.86
TTC3-220ENST00000487711 NDNQ99608 321 aa3.41□□□□□ -1.86
TTC3-220ENST00000487711 AP1M1Q9BXS5 423 aa3.41□□□□□ -1.86
TTC3-220ENST00000487711 EGLN3Q9H6Z9 239 aa3.41□□□□□ -1.86
TTC3-220ENST00000487711 RAVER2Q9HCJ3 691 aaKnown RBP3.41□□□□□ -1.86
TTC3-220ENST00000487711 TBC1D13Q9NVG8 400 aa3.41□□□□□ -1.86
TTC3-220ENST00000487711 HACD3Q9P035 362 aa3.41□□□□□ -1.86
TTC3-220ENST00000487711 IL16Q14005 1332 aa3.41□□□□□ -1.86
TTC3-220ENST00000487711 ANXA2P2A6NMY6 339 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 PI4K2BG5E9Z4 385 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 CCDC188H7C350 402 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 SLC1A7O00341 560 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 SOCS3O14543 225 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 TIMM44O43615 452 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 CEACAM4O75871 244 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 TCF4P15884 667 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 PDGFRAP16234 1089 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 PDHA2P29803 388 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 NPY4RP50391 375 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 KRTAP10-12P60413 245 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 IRX4P78413 519 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 MS4A2Q01362 244 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 SULT2A1Q06520 285 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 ELAVL2Q12926 359 aaKnown RBP3.4□□□□□ -1.87
TTC3-220ENST00000487711 NFATC2Q13469 925 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 UGCGQ16739 394 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 SNAI3Q3KNW1 292 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 FAM174BQ3ZCQ3 159 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 C6orf136Q5SQH8 315 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 SUSD4Q5VX71 490 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 TTC27Q6P3X3 843 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 FUT10Q6P4F1 479 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 PAQR6Q6TCH4 344 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 PIGWQ7Z7B1 504 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 ABI3BPQ7Z7G0 1075 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 CCDC60Q8IWA6 550 aaPredicted RBP3.4□□□□□ -1.87
TTC3-220ENST00000487711 METTL4Q8N3J2 472 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 Q8NBF4 154 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 AQP11Q8NBQ7 271 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 Q8NFD4 153 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 OR4D10Q8NGI6 311 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 C9orf43Q8TAL5 461 aaPredicted RBP3.4□□□□□ -1.87
TTC3-220ENST00000487711 SLC26A7Q8TE54 656 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 ATP8B4Q8TF62 1192 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 FAM218AQ96MZ4 157 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 AGAP4Q96P64 663 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 RAB3IPQ96QF0 476 aaPredicted RBP3.4□□□□□ -1.87
TTC3-220ENST00000487711 FERMT1Q9BQL6 677 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 GPATCH1Q9BRR8 931 aaKnown RBP3.4□□□□□ -1.87
TTC3-220ENST00000487711 MTHFD2LQ9H903 347 aaPredicted RBP3.4□□□□□ -1.87
TTC3-220ENST00000487711 NDE1Q9NXR1 346 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 IL36AQ9UHA7 158 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 MUTYHQ9UIF7 546 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 LNPEPQ9UIQ6 1025 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 MMP24Q9Y5R2 645 aa3.4□□□□□ -1.87
TTC3-220ENST00000487711 ABCC9O60706 1549 aa3.39□□□□□ -1.87
TTC3-220ENST00000487711 LOC105371242A0A075B767 164 aa3.39□□□□□ -1.87
TTC3-220ENST00000487711 F8VVB4 439 aa3.39□□□□□ -1.87
TTC3-220ENST00000487711 F8VWA3 439 aa3.39□□□□□ -1.87
TTC3-220ENST00000487711 SURF4O15260 269 aa3.39□□□□□ -1.87
TTC3-220ENST00000487711 CYTIPO60759 359 aa3.39□□□□□ -1.87
TTC3-220ENST00000487711 SPP1P10451 314 aa3.39□□□□□ -1.87
TTC3-220ENST00000487711 CRKLP46109 303 aaKnown RBP3.39□□□□□ -1.87
TTC3-220ENST00000487711 MFAP3P55082 362 aa3.39□□□□□ -1.87
TTC3-220ENST00000487711 TRA2AQ13595 282 aaKnown RBP eCLIP3.39□□□□□ -1.87
TTC3-220ENST00000487711 RAPSNQ13702 412 aa3.39□□□□□ -1.87
TTC3-220ENST00000487711 FAM189A2Q15884 450 aa3.39□□□□□ -1.87
TTC3-220ENST00000487711 MOXD1Q6UVY6 613 aa3.39□□□□□ -1.87
TTC3-220ENST00000487711 SPATA21Q7Z572 469 aa3.39□□□□□ -1.87
TTC3-220ENST00000487711 DNAJB7Q7Z6W7 309 aaPredicted RBP3.39□□□□□ -1.87
TTC3-220ENST00000487711 PRSS33Q8NF86 280 aa3.39□□□□□ -1.87
TTC3-220ENST00000487711 FAM222BQ8WU58 562 aa3.39□□□□□ -1.87
TTC3-220ENST00000487711 P2RX5Q93086 422 aa3.39□□□□□ -1.87
TTC3-220ENST00000487711 CNRIP1Q96F85 164 aaPredicted RBP3.39□□□□□ -1.87
TTC3-220ENST00000487711 ATXN7L3BQ96GX2 97 aa3.39□□□□□ -1.87
TTC3-220ENST00000487711 PRICKLE1Q96MT3 831 aaPredicted RBP3.39□□□□□ -1.87
TTC3-220ENST00000487711 GDAP1L1Q96MZ0 367 aa3.39□□□□□ -1.87
TTC3-220ENST00000487711 MGME1Q9BQP7 344 aa3.39□□□□□ -1.87
TTC3-220ENST00000487711 PYGO2Q9BRQ0 406 aa3.39□□□□□ -1.87
TTC3-220ENST00000487711 PI4K2AQ9BTU6 479 aa3.39□□□□□ -1.87
TTC3-220ENST00000487711 NRBP1Q9UHY1 535 aa3.39□□□□□ -1.87
TTC3-220ENST00000487711 WIPI2Q9Y4P8 454 aa3.39□□□□□ -1.87
TTC3-220ENST00000487711 NACADO15069 1562 aa3.38□□□□□ -1.87
TTC3-220ENST00000487711 ARHGEF37A1IGU5 675 aa3.38□□□□□ -1.87
TTC3-220ENST00000487711 MTMR11A4FU01 709 aa3.38□□□□□ -1.87
TTC3-220ENST00000487711 ASB14A6NK59 587 aa3.38□□□□□ -1.87
TTC3-220ENST00000487711 H7C0S8 307 aa3.38□□□□□ -1.87
TTC3-220ENST00000487711 TFECO14948 347 aaPredicted RBP3.38□□□□□ -1.87
TTC3-220ENST00000487711 PRAF2O60831 178 aa3.38□□□□□ -1.87
TTC3-220ENST00000487711 YES1P07947 543 aa3.38□□□□□ -1.87
TTC3-220ENST00000487711 RBMS1P29558 406 aaKnown RBP3.38□□□□□ -1.87
TTC3-220ENST00000487711 CAPZA1P52907 286 aa3.38□□□□□ -1.87
TTC3-220ENST00000487711 DHODHQ02127 395 aa3.38□□□□□ -1.87
TTC3-220ENST00000487711 SRSF9Q13242 221 aaKnown RBP eCLIP3.38□□□□□ -1.87
TTC3-220ENST00000487711 TNK1Q13470 666 aa3.38□□□□□ -1.87
TTC3-220ENST00000487711 LBHQ53QV2 105 aaPredicted RBP3.38□□□□□ -1.87
TTC3-220ENST00000487711 PRSS55Q6UWB4 352 aaPredicted RBP3.38□□□□□ -1.87
TTC3-220ENST00000487711 SUSD1Q6UWL2 747 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms