RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 H7BY64 318 aa9.06□□□□□ -0.96
SF3B1-211ENST00000487698 CELA2BP08218 269 aaPredicted RBP9.06□□□□□ -0.96
SF3B1-211ENST00000487698 CHRM5P08912 532 aaPredicted RBP9.06□□□□□ -0.96
SF3B1-211ENST00000487698 PRPS1L1P21108 318 aa9.06□□□□□ -0.96
SF3B1-211ENST00000487698 UBE2IP63279 158 aaKnown RBP9.06□□□□□ -0.96
SF3B1-211ENST00000487698 PHC1P78364 1004 aa9.06□□□□□ -0.96
SF3B1-211ENST00000487698 MS4A2Q01362 244 aa9.06□□□□□ -0.96
SF3B1-211ENST00000487698 RPL6Q02878 288 aaKnown RBP9.06□□□□□ -0.96
SF3B1-211ENST00000487698 SPATS1Q496A3 300 aa9.06□□□□□ -0.96
SF3B1-211ENST00000487698 COMMD6Q7Z4G1 85 aa9.06□□□□□ -0.96
SF3B1-211ENST00000487698 DHDDSQ86SQ9 333 aa9.06□□□□□ -0.96
SF3B1-211ENST00000487698 AMIGO1Q86WK6 493 aa9.06□□□□□ -0.96
SF3B1-211ENST00000487698 SYT12Q8IV01 421 aa9.06□□□□□ -0.96
SF3B1-211ENST00000487698 ADGRF3Q8IZF5 1079 aa9.06□□□□□ -0.96
SF3B1-211ENST00000487698 METTL4Q8N3J2 472 aa9.06□□□□□ -0.96
SF3B1-211ENST00000487698 DEFB119Q8N690 84 aa9.06□□□□□ -0.96
SF3B1-211ENST00000487698 OR2L3Q8NG85 312 aa9.06□□□□□ -0.96
SF3B1-211ENST00000487698 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.06□□□□□ -0.96
SF3B1-211ENST00000487698 ZFPM2Q8WW38 1151 aa9.06□□□□□ -0.96
SF3B1-211ENST00000487698 LCN9Q8WX39 176 aa9.06□□□□□ -0.96
SF3B1-211ENST00000487698 GTF2H4Q92759 462 aa9.06□□□□□ -0.96
SF3B1-211ENST00000487698 STMN2Q93045 179 aa9.06□□□□□ -0.96
SF3B1-211ENST00000487698 ASB9Q96DX5 294 aa9.06□□□□□ -0.96
SF3B1-211ENST00000487698 PRAP1Q96NZ9 151 aa9.06□□□□□ -0.96
SF3B1-211ENST00000487698 CD320Q9NPF0 282 aa9.06□□□□□ -0.96
SF3B1-211ENST00000487698 NUP214P35658 2090 aaPredicted RBP9.05□□□□□ -0.96
SF3B1-211ENST00000487698 TRBC2A0A5B9 178 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 STK25O00506 426 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 AXIN1O15169 862 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 MAP3K13O43283 966 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 PCDH7O60245 1069 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 SH3BGRLO75368 114 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 BCAS2O75934 225 aaPredicted RBP9.05□□□□□ -0.96
SF3B1-211ENST00000487698 MYO1DO94832 1006 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 SEMA3DO95025 777 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 TGFB1P01137 390 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 HSD17B1P14061 328 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 NME1P15531 152 aaKnown RBP9.05□□□□□ -0.96
SF3B1-211ENST00000487698 HOXB9P17482 250 aaPredicted RBP9.05□□□□□ -0.96
SF3B1-211ENST00000487698 BCKDHBP21953 392 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 PTX3P26022 381 aaPredicted RBP9.05□□□□□ -0.96
SF3B1-211ENST00000487698 CD38P28907 300 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 BLKP51451 505 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 RACK1P63244 317 aaKnown RBP9.05□□□□□ -0.96
SF3B1-211ENST00000487698 PWP1Q13610 501 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 TRIM25Q14258 630 aaKnown RBP9.05□□□□□ -0.96
SF3B1-211ENST00000487698 RCN1Q15293 331 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 SF1Q15637 639 aaKnown RBP9.05□□□□□ -0.96
SF3B1-211ENST00000487698 UGT8Q16880 541 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 DPY19L1Q2PZI1 675 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 ZNF542PQ5EBM4 170 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 C6orf10Q5SRN2 563 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 MSANTD1Q6ZTZ1 278 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 FBXL6Q8N531 539 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 FAM156AQ8NDB6 213 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 GPR156Q8NFN8 814 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 FLVCR1-AS1Q8TAF5 88 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 JPH3Q8WXH2 748 aaPredicted RBP9.05□□□□□ -0.96
SF3B1-211ENST00000487698 SPACA7Q96KW9 195 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 HSPA12BQ96MM6 686 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 LRRC61Q9BV99 259 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 SARGQ9BW04 601 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 MS4A8Q9BY19 250 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 OR51B5Q9H339 312 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 MRPS30Q9NP92 439 aaKnown RBP9.05□□□□□ -0.96
SF3B1-211ENST00000487698 SERHLQ9NQF3 203 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 POT1Q9NUX5 634 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 MAN2B2Q9Y2E5 1009 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 TRBV5-3A0A0A0MS03 114 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 C15orf38-AP3S2A0A0A6YYH1 394 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 KIR2DS5A0A0G2JLQ3 304 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 A0A0G2JNG1 304 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 FEZF1A0PJY2 475 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 OR5K4A6NMS3 321 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 H0Y3Z8 333 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 KIR2DS3K7RE56 304 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 BTN3A3O00478 584 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 FKBP6O75344 327 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 KLHL18O94889 574 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 CCNDBP1O95273 360 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 CSF2P04141 144 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 ANXA4P09525 319 aaPredicted RBP9.05□□□□□ -0.96
SF3B1-211ENST00000487698 MSX2P35548 267 aaPredicted RBP9.05□□□□□ -0.96
SF3B1-211ENST00000487698 ASMTP46597 345 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 HNRNPFP52597 415 aaKnown RBP9.05□□□□□ -0.96
SF3B1-211ENST00000487698 FLOT2Q14254 428 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 GPR18Q14330 331 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 KIR2DS5Q14953 304 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 RBBP5Q15291 538 aaKnown RBP9.05□□□□□ -0.96
SF3B1-211ENST00000487698 MAPKAPK3Q16644 382 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 PRRT3Q5FWE3 981 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 RABL3Q5HYI8 236 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 KHDRBS2Q5VWX1 349 aaKnown RBP9.05□□□□□ -0.96
SF3B1-211ENST00000487698 CWF19L1Q69YN2 538 aaKnown RBP9.05□□□□□ -0.96
SF3B1-211ENST00000487698 ZNF425Q6IV72 752 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 NANOGP8Q6NSW7 305 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 AAGABQ6PD74 315 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 SLC36A4Q6YBV0 504 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 CAMKMTQ7Z624 323 aa9.05□□□□□ -0.96
SF3B1-211ENST00000487698 ARPINQ7Z6K5 226 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms