RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 KIF26BQ2KJY2 2108 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 CDRT15L2A8MXV6 281 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 HMGB1P1B2RPK0 211 aaPredicted RBP12.19□□□□□ -0.46
PRDM2-208ENST00000487453 NVLO15381 856 aaKnown RBP12.19□□□□□ -0.46
PRDM2-208ENST00000487453 NDUFS4O43181 175 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 ZNF749O43361 778 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 LCMT2O60294 686 aaKnown RBP12.19□□□□□ -0.46
PRDM2-208ENST00000487453 SRPX2O60687 465 aaPredicted RBP12.19□□□□□ -0.46
PRDM2-208ENST00000487453 PRAMEF4O60810 478 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 CPNE3O75131 537 aaKnown RBP12.19□□□□□ -0.46
PRDM2-208ENST00000487453 OTCP00480 354 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 NTRK1P04629 796 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 ATXN8OSP0DMR3 200 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 PCNAP12004 261 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 NEFHP12036 1026 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 CD22P20273 847 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 ERVPABLB-1P60509 514 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 RELAQ04206 551 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 CLCQ05315 142 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 LAPTM5Q13571 262 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 GRM7Q14831 915 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 HIST2H2ACQ16777 129 aaPredicted RBP12.19□□□□□ -0.46
PRDM2-208ENST00000487453 HKDC1Q2TB90 917 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 TBC1D25Q3MII6 688 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 UNC50Q53HI1 259 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 WASHC2DQ5SRD0 308 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 PRAMEF17Q5VTA0 474 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 PRAMEF9Q5VWM5 478 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 HIST2H2AA3Q6FI13 130 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 GRHL2Q6ISB3 625 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 TLDC1Q6P9B6 456 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 ASPGQ86U10 573 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 MFSD9Q8NBP5 474 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 PPP1R14CQ8TAE6 165 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 CCT6BQ92526 530 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 GATA6Q92908 595 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 WDR34Q96EX3 536 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 DRC3Q9H069 523 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 GSTO2Q9H4Y5 243 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 CCDC86Q9H6F5 360 aaKnown RBP12.19□□□□□ -0.46
PRDM2-208ENST00000487453 ACTR5Q9H9F9 607 aaPredicted RBP12.19□□□□□ -0.46
PRDM2-208ENST00000487453 TXLNGQ9NUQ3 528 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 NKIRAS1Q9NYS0 192 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 SRPK3Q9UPE1 567 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 STK38LQ9Y2H1 464 aa12.19□□□□□ -0.46
PRDM2-208ENST00000487453 WDR91A4D1P6 747 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 ANKDD1BA6NHY2 528 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 H3BMH7 237 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 STMND1H3BQB6 276 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 P2RX6O15547 441 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 TRIM13O60858 407 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 CLDN9O95484 217 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 MLYCDO95822 493 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 BPGMP07738 259 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 HNF4AP41235 474 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 ETV4P43268 484 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 SCTRP47872 440 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 SERPINB4P48594 390 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 DNAJB13P59910 316 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 LCP2Q13094 533 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 TRAF3Q13114 568 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 DDX39BQ13838 428 aaKnown RBP12.18□□□□□ -0.46
PRDM2-208ENST00000487453 MPP2Q14168 576 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 TBCCQ15814 346 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 CPSF6Q16630 551 aaKnown RBP eCLIP12.18□□□□□ -0.46
PRDM2-208ENST00000487453 HHATQ5VTY9 493 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 LIPJQ5W064 366 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 TTC19Q6DKK2 380 aaPredicted RBP12.18□□□□□ -0.46
PRDM2-208ENST00000487453 ADNP2Q6IQ32 1131 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 MED27Q6P2C8 311 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 UNQ6494/PRO21346Q6UXR6 183 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 ZCCHC23Q6ZST2 131 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 FRMD7Q6ZUT3 714 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 VN1R4Q7Z5H5 301 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 ZFAND4Q86XD8 727 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 ANKRD53Q8N9V6 530 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 CAMKVQ8NCB2 501 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 OR4F6Q8NGB9 312 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 ZCCHC10Q8TBK6 192 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 SLC13A3Q8WWT9 602 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 THAP11Q96EK4 314 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 ZNF578Q96N58 590 aaPredicted RBP12.18□□□□□ -0.46
PRDM2-208ENST00000487453 MACROD1Q9BQ69 325 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 DHCR7Q9UBM7 475 aaKnown RBP12.18□□□□□ -0.46
PRDM2-208ENST00000487453 NDOR1Q9UHB4 597 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 ZFP69BQ9UJL9 534 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 RUVBL1Q9Y265 456 aaKnown RBP12.18□□□□□ -0.46
PRDM2-208ENST00000487453 RNF11Q9Y3C5 154 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 PCDHB3Q9Y5E6 796 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 AP1M2Q9Y6Q5 423 aa12.18□□□□□ -0.46
PRDM2-208ENST00000487453 CNOT1A5YKK6 2376 aaKnown RBP12.18□□□□□ -0.46
PRDM2-208ENST00000487453 KCNE1BA0A087WTH5 132 aa12.17□□□□□ -0.46
PRDM2-208ENST00000487453 TEX51A0A1B0GUA7 166 aa12.17□□□□□ -0.46
PRDM2-208ENST00000487453 HYKKA2RU49 373 aa12.17□□□□□ -0.46
PRDM2-208ENST00000487453 C1QTNF9BB2RNN3 333 aa12.17□□□□□ -0.46
PRDM2-208ENST00000487453 PPP6CO00743 305 aa12.17□□□□□ -0.46
PRDM2-208ENST00000487453 TXNDC9O14530 226 aa12.17□□□□□ -0.46
PRDM2-208ENST00000487453 FFAR3O14843 346 aa12.17□□□□□ -0.46
PRDM2-208ENST00000487453 GPR42O15529 346 aa12.17□□□□□ -0.46
PRDM2-208ENST00000487453 UGDHO60701 494 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms