RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 CAPN1P07384 714 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 SBK3P0C264 359 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 CCNYL3P0C7X3 344 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 RNF224P0DH78 156 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 ZNF37AP17032 561 aaPredicted RBP9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 VCLP18206 1134 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 PREPP48147 710 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 RPL14P50914 215 aaKnown RBP9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 CCL11P51671 97 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 AQP5P55064 265 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 CDKN2DP55273 166 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 NCALDP61601 193 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 KLRB1Q12918 225 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 DLG1Q12959 904 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 PRKG2Q13237 762 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 ZNF658BQ4V348 819 aaPredicted RBP9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 CRTC2Q53ET0 693 aaPredicted RBP9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 PRR30Q53SZ7 412 aaPredicted RBP9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 ZRANB3Q5FWF4 1079 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 ZNF789Q5FWF6 425 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 CFAP157Q5JU67 520 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 PLEKHS1Q5SXH7 462 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 ZNF549Q6P9A3 640 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 ZCCHC23Q6ZST2 131 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 MTDHQ86UE4 582 aaKnown RBP9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 RBM12BQ8IXT5 1001 aaKnown RBP9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 CLDN19Q8N6F1 224 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 OR1L3Q8NH93 324 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 STAG3L4Q8TBR4 150 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 MR1Q95460 341 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 ULK4Q96C45 1275 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 KLHL29Q96CT2 875 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 L3HYPDHQ96EM0 354 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 PDLIM5Q96HC4 596 aaKnown RBP9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 FERD3LQ96RJ6 166 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 SORT1Q99523 831 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 NDNQ99608 321 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 PDE7BQ9NP56 450 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 SMOXQ9NWM0 555 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 CRYL1Q9Y2S2 319 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 DNMT3AQ9Y6K1 912 aaPredicted RBP9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 CAPN7Q9Y6W3 813 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 DOPEY2Q9Y3R5 2298 aa9.04□□□□□ -0.96
TMEM39A-208ENST00000486159 BLACEA4D250 179 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 TRPC5OSA6NMA1 111 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 AGAP14A8MT82 685 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 BTN3A1O00481 513 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 PRMT5O14744 637 aaPredicted RBP9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 HDAC3O15379 428 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 ITM2AO43736 263 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 KCNJ13O60928 360 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 CD1DP15813 335 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 ST6GAL1P15907 406 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 TFEBP19484 476 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 IMPDH1P20839 514 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 CALB2P22676 271 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 GNLYP22749 145 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 PTPN4P29074 926 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 SERPINB3P29508 390 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 ADSLP30566 484 aaPredicted RBP9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 GLRBP48167 497 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 ARL4DP49703 201 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 MNAT1P51948 309 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 ITGA1P56199 1179 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 HSD11B2P80365 405 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 RAPSNQ13702 412 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 SEMA3AQ14563 771 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 UGT8Q16880 541 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 PTCHD3Q3KNS1 767 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 BCL7AQ4VC05 210 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 CES4AQ5XG92 561 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 TCTN3Q6NUS6 607 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 ASRGL1Q7L266 308 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 TAS2R42Q7RTR8 314 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 ISCA2Q86U28 154 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 TRIM73Q86UV7 250 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 OOSP2Q86WS3 158 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 TMEM126BQ8IUX1 230 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 FAM20CQ8IXL6 584 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 PIANPQ8IYJ0 282 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 ENDOVQ8N8Q3 282 aaKnown RBP9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 TEX19Q8NA77 164 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 KIAA1191Q96A73 305 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 THOC1Q96FV9 657 aaKnown RBP9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 NSL1Q96IY1 281 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 LINC00615Q96LM1 132 aaPredicted RBP9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 RILPQ96NA2 401 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 BIRC8Q96P09 236 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 CCDC28BQ9BUN5 200 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 C20orf27Q9GZN8 174 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 OR52A5Q9H2C5 316 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 LRMDAQ9H2I8 198 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 KIR3DX1Q9H7L2 352 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 COG4Q9H9E3 785 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 FAM60AQ9NP50 221 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 CPSF2Q9P2I0 782 aaKnown RBP9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 CRLS1Q9UJA2 301 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 TRMT6Q9UJA5 497 aaKnown RBP9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 GNPTGQ9UJJ9 305 aa9.03□□□□□ -0.96
TMEM39A-208ENST00000486159 KCND3Q9UK17 655 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms