RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 GMPRP36959 345 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 GDF5P43026 501 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 SLC6A12P48065 614 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 KCNC1P48547 511 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 CSRP3P50461 194 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 RPS18P62269 152 aaKnown RBP11.87□□□□□ -0.51
HMG20B-211ENST00000486028 COL9A2Q14055 689 aaPredicted RBP11.87□□□□□ -0.51
HMG20B-211ENST00000486028 SLC29A2Q14542 456 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 ACAP2Q15057 778 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 NDUFA9Q16795 377 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 UGT8Q16880 541 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 DEFB109BQ30KR1 87 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 CATSPEREQ5SY80 951 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 BORAQ6PGQ7 559 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 NXPE4Q6UWF7 544 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 OVCH1Q7RTY7 1134 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 GSPT2Q8IYD1 628 aaKnown RBP11.87□□□□□ -0.51
HMG20B-211ENST00000486028 CENPLQ8N0S6 344 aaPredicted RBP11.87□□□□□ -0.51
HMG20B-211ENST00000486028 CNPY4Q8N129 248 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 MFSD9Q8NBP5 474 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 CAMKVQ8NCB2 501 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 RHEBL1Q8TAI7 183 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 THAP4Q8WY91 577 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 EXTL1Q92935 676 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 FKBP10Q96AY3 582 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 TSNARE1Q96NA8 513 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 AIF1LQ9BQI0 150 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 PELI2Q9HAT8 420 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 NUDT4Q9NZJ9 180 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 PTBP2Q9UKA9 531 aaKnown RBP11.87□□□□□ -0.51
HMG20B-211ENST00000486028 POLHQ9Y253 713 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 RUVBL1Q9Y265 456 aaKnown RBP11.87□□□□□ -0.51
HMG20B-211ENST00000486028 LOC400499M0QZD8 3231 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 PIEZO2Q9H5I5 2752 aa11.87□□□□□ -0.51
HMG20B-211ENST00000486028 SUPT3HB4E1H0 165 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 TRIM49D1C9J1S8 452 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 TAPBPO15533 448 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 PRPF4O43172 522 aaKnown RBP eCLIP11.86□□□□□ -0.51
HMG20B-211ENST00000486028 OR1F1O43749 312 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 LCMT2O60294 686 aaKnown RBP11.86□□□□□ -0.51
HMG20B-211ENST00000486028 SUPT3HO75486 399 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 STK16O75716 305 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 ALBP02768 609 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 COL6A2P12110 1019 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 BCL6P41182 706 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 CCR10P46092 362 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 OR1D4P47884 311 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 HSPA7P48741 367 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 NFKB2Q00653 900 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 IRF9Q00978 393 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 SLC9A5Q14940 896 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 HKDC1Q2TB90 917 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 C18orf21Q32NC0 220 aaPredicted RBP11.86□□□□□ -0.51
HMG20B-211ENST00000486028 ATP1A1-AS1Q5TC04 95 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 PDPRQ8NCN5 879 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 APOBEC4Q8WW27 367 aaKnown RBP11.86□□□□□ -0.51
HMG20B-211ENST00000486028 EXT2Q93063 718 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 ISL2Q96A47 359 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 COL26A1Q96A83 441 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 MTBPQ96DY7 904 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 MVB12AQ96EY5 273 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 C10orf90Q96M02 699 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 ATOH8Q96SQ7 321 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 SARGQ9BW04 601 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 ANKZF1Q9H8Y5 726 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 SYNPO2LQ9H987 977 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 ZNF304Q9HCX3 659 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 SLC22A11Q9NSA0 550 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 DNAJC11Q9NVH1 559 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 GPRC5BQ9NZH0 403 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 FETUBQ9UGM5 382 aa11.86□□□□□ -0.51
HMG20B-211ENST00000486028 EIF4E1BA6NMX2 242 aaKnown RBP11.85□□□□□ -0.51
HMG20B-211ENST00000486028 UBXN8O00124 270 aa11.85□□□□□ -0.51
HMG20B-211ENST00000486028 TK2O00142 265 aa11.85□□□□□ -0.51
HMG20B-211ENST00000486028 CLGNO14967 610 aa11.85□□□□□ -0.51
HMG20B-211ENST00000486028 P2RX6O15547 441 aa11.85□□□□□ -0.51
HMG20B-211ENST00000486028 KLF7O75840 302 aaPredicted RBP11.85□□□□□ -0.51
HMG20B-211ENST00000486028 MED26O95402 600 aa11.85□□□□□ -0.51
HMG20B-211ENST00000486028 FURINP09958 794 aa11.85□□□□□ -0.51
HMG20B-211ENST00000486028 C1GALT1C1LP0DN25 315 aa11.85□□□□□ -0.51
HMG20B-211ENST00000486028 MYBL2P10244 700 aa11.85□□□□□ -0.51
HMG20B-211ENST00000486028 SFTPCP11686 197 aa11.85□□□□□ -0.51
HMG20B-211ENST00000486028 ITGAXP20702 1163 aa11.85□□□□□ -0.51
HMG20B-211ENST00000486028 CXCR2P25025 360 aa11.85□□□□□ -0.51
HMG20B-211ENST00000486028 FOLR3P41439 243 aa11.85□□□□□ -0.51
HMG20B-211ENST00000486028 MAGEA12P43365 314 aa11.85□□□□□ -0.51
HMG20B-211ENST00000486028 GLRBP48167 497 aa11.85□□□□□ -0.51
HMG20B-211ENST00000486028 MEF2AQ02078 507 aaPredicted RBP11.85□□□□□ -0.51
HMG20B-211ENST00000486028 CDC16Q13042 620 aa11.85□□□□□ -0.51
HMG20B-211ENST00000486028 FAM53BQ14153 422 aa11.85□□□□□ -0.51
HMG20B-211ENST00000486028 SSPNQ14714 243 aa11.85□□□□□ -0.51
HMG20B-211ENST00000486028 LINC00303Q3SY05 128 aa11.85□□□□□ -0.51
HMG20B-211ENST00000486028 MRPL14Q6P1L8 145 aaKnown RBP11.85□□□□□ -0.51
HMG20B-211ENST00000486028 ADGRD1Q6QNK2 874 aa11.85□□□□□ -0.51
HMG20B-211ENST00000486028 SLCO4C1Q6ZQN7 724 aa11.85□□□□□ -0.51
HMG20B-211ENST00000486028 VN1R4Q7Z5H5 301 aa11.85□□□□□ -0.51
HMG20B-211ENST00000486028 TMPRSS11BQ86T26 416 aa11.85□□□□□ -0.51
HMG20B-211ENST00000486028 ASPGQ86U10 573 aa11.85□□□□□ -0.51
HMG20B-211ENST00000486028 METTL27Q8N6F8 245 aaPredicted RBP11.85□□□□□ -0.51
HMG20B-211ENST00000486028 SNX31Q8N9S9 440 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms