RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 FCRL6Q6DN72 434 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 ZNF425Q6IV72 752 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 GTF2H2CQ6P1K8 395 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 PRMT9Q6P2P2 845 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 FBXO42Q6P3S6 717 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 TMIGD1Q6UXZ0 262 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 CDHR3Q6ZTQ4 885 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 ZNF605Q86T29 641 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 NLGN4XQ8N0W4 816 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 PLD6Q8N2A8 252 aaKnown RBP7.92□□□□□ -1.14
SF3A1-208ENST00000485618 ZNF843Q8N446 348 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 IL22RA1Q8N6P7 574 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 TEX9Q8N6V9 391 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 CSNK1A1LQ8N752 337 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 PTGR2Q8N8N7 351 aaPredicted RBP7.92□□□□□ -1.14
SF3A1-208ENST00000485618 ZSCAN1Q8NBB4 408 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 NLGN4YQ8NFZ3 816 aaPredicted RBP7.92□□□□□ -1.14
SF3A1-208ENST00000485618 OR4K1Q8NGD4 311 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 NEIL2Q969S2 332 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 ZNF501Q96CX3 271 aaPredicted RBP7.92□□□□□ -1.14
SF3A1-208ENST00000485618 PHF21BQ96EK2 531 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 MVB12AQ96EY5 273 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 NAF1Q96HR8 494 aaKnown RBP7.92□□□□□ -1.14
SF3A1-208ENST00000485618 APOPT1Q96IL0 206 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 LRFN5Q96NI6 719 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 ZIM3Q96PE6 472 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 ERVK-6Q9BXR3 956 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 NT5DC2Q9H857 520 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 ACTR8Q9H981 624 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 ACTR5Q9H9F9 607 aaPredicted RBP7.92□□□□□ -1.14
SF3A1-208ENST00000485618 ENAMQ9NRM1 1142 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 MKS1Q9NXB0 559 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 GPN3Q9UHW5 284 aaPredicted RBP7.92□□□□□ -1.14
SF3A1-208ENST00000485618 KCND3Q9UK17 655 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 PLLPQ9Y342 182 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 PCDHGA11Q9Y5H2 935 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 B3GALT1Q9Y5Z6 326 aa7.92□□□□□ -1.14
SF3A1-208ENST00000485618 AHCTF1Q8WYP5 2266 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 IGSF10Q6WRI0 2623 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 A0A0J9YVX5 310 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 HYKKA2RU49 373 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 C21orf140B9A014 251 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 C9orf172C9J069 976 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.91□□□□□ -1.14
SF3A1-208ENST00000485618 C9J4A7 227 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 H0YGG7 62 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 CASC3O15234 703 aaKnown RBP7.91□□□□□ -1.14
SF3A1-208ENST00000485618 TM9SF1O15321 606 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 TAPBPO15533 448 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 ZNF749O43361 778 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 PRAMEF10O60809 474 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 KIAA0754O94854 1291 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 SNUPNO95149 360 aaKnown RBP7.91□□□□□ -1.14
SF3A1-208ENST00000485618 ZWINTO95229 277 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 NEFHP12036 1026 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 ALAS2P22557 587 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 EEF1DP29692 281 aaKnown RBP7.91□□□□□ -1.14
SF3A1-208ENST00000485618 ETV5P41161 510 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 AVPR1BP47901 424 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 ARF3P61204 181 aaPredicted RBP7.91□□□□□ -1.14
SF3A1-208ENST00000485618 RPS15P62841 145 aaKnown RBP7.91□□□□□ -1.14
SF3A1-208ENST00000485618 CSNK1G2P78368 415 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 MC1RQ01726 317 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 TLE3Q04726 772 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 PCDH1Q08174 1060 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 RBBP5Q15291 538 aaKnown RBP7.91□□□□□ -1.14
SF3A1-208ENST00000485618 PWWP2BQ6NUJ5 590 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 MED27Q6P2C8 311 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 SLCO4C1Q6ZQN7 724 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 RNF44Q7L0R7 432 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 ABHD13Q7L211 337 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 TMPRSS11BQ86T26 416 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 ASPGQ86U10 573 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 MYLK4Q86YV6 388 aaPredicted RBP7.91□□□□□ -1.14
SF3A1-208ENST00000485618 SPACA3Q8IXA5 215 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 FAM20CQ8IXL6 584 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 CACNA2D3Q8IZS8 1091 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 KIRREL3Q8IZU9 778 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 CYP4X1Q8N118 509 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 C4orf33Q8N1A6 199 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 BANPQ8N9N5 519 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 MFSD9Q8NBP5 474 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 LSM14AQ8ND56 463 aaKnown RBP7.91□□□□□ -1.14
SF3A1-208ENST00000485618 SRFBP1Q8NEF9 429 aaKnown RBP7.91□□□□□ -1.14
SF3A1-208ENST00000485618 PPP1R14CQ8TAE6 165 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 MZB1Q8WU39 189 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 KCNE4Q8WWG9 221 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 SLC13A3Q8WWT9 602 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 WDR34Q96EX3 536 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 VPS50Q96JG6 964 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 PPM1MQ96MI6 270 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 OR4K3Q96R72 315 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 CTRCQ99895 268 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 TRMOQ9BU70 441 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 SARGQ9BW04 601 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 GPR87Q9BY21 358 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 IPPKQ9H8X2 491 aa7.91□□□□□ -1.14
SF3A1-208ENST00000485618 CLK4Q9HAZ1 481 aaKnown RBP7.91□□□□□ -1.14
SF3A1-208ENST00000485618 EML4Q9HC35 981 aaKnown RBP7.91□□□□□ -1.14
SF3A1-208ENST00000485618 FAM60AQ9NP50 221 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms