RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 C18orf21Q32NC0 220 aaPredicted RBP16.95■□□□□ 0.3
SREBF1-213ENST00000485080 TECRLQ5HYJ1 363 aa16.95■□□□□ 0.3
SREBF1-213ENST00000485080 CATSPEREQ5SY80 951 aa16.95■□□□□ 0.3
SREBF1-213ENST00000485080 MRPL14Q6P1L8 145 aaKnown RBP16.95■□□□□ 0.3
SREBF1-213ENST00000485080 SLCO4C1Q6ZQN7 724 aa16.95■□□□□ 0.3
SREBF1-213ENST00000485080 LRRC70Q7Z2Q7 622 aa16.95■□□□□ 0.3
SREBF1-213ENST00000485080 PLD3Q8IV08 490 aa16.95■□□□□ 0.3
SREBF1-213ENST00000485080 PLD6Q8N2A8 252 aaKnown RBP16.95■□□□□ 0.3
SREBF1-213ENST00000485080 TBC1D19Q8N5T2 526 aa16.95■□□□□ 0.3
SREBF1-213ENST00000485080 CAMKVQ8NCB2 501 aa16.95■□□□□ 0.3
SREBF1-213ENST00000485080 LSM14AQ8ND56 463 aaKnown RBP16.95■□□□□ 0.3
SREBF1-213ENST00000485080 ACMSDQ8TDX5 336 aa16.95■□□□□ 0.3
SREBF1-213ENST00000485080 MZB1Q8WU39 189 aa16.95■□□□□ 0.3
SREBF1-213ENST00000485080 CAVIN3Q969G5 261 aa16.95■□□□□ 0.3
SREBF1-213ENST00000485080 WDR34Q96EX3 536 aa16.95■□□□□ 0.3
SREBF1-213ENST00000485080 SEC16BQ96JE7 1060 aa16.95■□□□□ 0.3
SREBF1-213ENST00000485080 AIF1LQ9BQI0 150 aa16.95■□□□□ 0.3
SREBF1-213ENST00000485080 SLC22A11Q9NSA0 550 aa16.95■□□□□ 0.3
SREBF1-213ENST00000485080 DNAJC11Q9NVH1 559 aa16.95■□□□□ 0.3
SREBF1-213ENST00000485080 TMCO1Q9UM00 188 aa16.95■□□□□ 0.3
SREBF1-213ENST00000485080 CDC14AQ9UNH5 594 aa16.95■□□□□ 0.3
SREBF1-213ENST00000485080 UBXN8O00124 270 aa16.94■□□□□ 0.3
SREBF1-213ENST00000485080 NKX2-8O15522 239 aa16.94■□□□□ 0.3
SREBF1-213ENST00000485080 P2RX6O15547 441 aa16.94■□□□□ 0.3
SREBF1-213ENST00000485080 KLF7O75840 302 aaPredicted RBP16.94■□□□□ 0.3
SREBF1-213ENST00000485080 MED26O95402 600 aa16.94■□□□□ 0.3
SREBF1-213ENST00000485080 EIF2S1P05198 315 aaKnown RBP16.94■□□□□ 0.3
SREBF1-213ENST00000485080 ALAS2P22557 587 aa16.94■□□□□ 0.3
SREBF1-213ENST00000485080 CXCR2P25025 360 aa16.94■□□□□ 0.3
SREBF1-213ENST00000485080 DEKP35659 375 aaKnown RBP16.94■□□□□ 0.3
SREBF1-213ENST00000485080 HSD17B3P37058 310 aa16.94■□□□□ 0.3
SREBF1-213ENST00000485080 CASP2P42575 452 aa16.94■□□□□ 0.3
SREBF1-213ENST00000485080 SCTRP47872 440 aa16.94■□□□□ 0.3
SREBF1-213ENST00000485080 HSPA7P48741 367 aa16.94■□□□□ 0.3
SREBF1-213ENST00000485080 CDC20Q12834 499 aa16.94■□□□□ 0.3
SREBF1-213ENST00000485080 PWP1Q13610 501 aa16.94■□□□□ 0.3
SREBF1-213ENST00000485080 ERCC6LQ2NKX8 1250 aa16.94■□□□□ 0.3
SREBF1-213ENST00000485080 HKDC1Q2TB90 917 aa16.94■□□□□ 0.3
SREBF1-213ENST00000485080 C1orf189Q5VU69 101 aa16.94■□□□□ 0.3
SREBF1-213ENST00000485080 ATG9BQ674R7 924 aa16.94■□□□□ 0.3
SREBF1-213ENST00000485080 OVCH1Q7RTY7 1134 aa16.94■□□□□ 0.3
SREBF1-213ENST00000485080 ENDOVQ8N8Q3 282 aaKnown RBP16.94■□□□□ 0.3
SREBF1-213ENST00000485080 UBLCP1Q8WVY7 318 aaPredicted RBP16.94■□□□□ 0.3
SREBF1-213ENST00000485080 TTC9Q92623 222 aa16.94■□□□□ 0.3
SREBF1-213ENST00000485080 TSNARE1Q96NA8 513 aa16.94■□□□□ 0.3
SREBF1-213ENST00000485080 RUFY1Q96T51 708 aa16.94■□□□□ 0.3
SREBF1-213ENST00000485080 NT5DC2Q9H857 520 aa16.94■□□□□ 0.3
SREBF1-213ENST00000485080 WDR54Q9H977 334 aa16.94■□□□□ 0.3
SREBF1-213ENST00000485080 IFT80Q9P2H3 777 aaPredicted RBP16.94■□□□□ 0.3
SREBF1-213ENST00000485080 RAB21Q9UL25 225 aa16.94■□□□□ 0.3
SREBF1-213ENST00000485080 TCFL5Q9UL49 500 aa16.94■□□□□ 0.3
SREBF1-213ENST00000485080 PADI2Q9Y2J8 665 aa16.94■□□□□ 0.3
SREBF1-213ENST00000485080 MRPS18BQ9Y676 258 aaKnown RBP16.94■□□□□ 0.3
SREBF1-213ENST00000485080 SUPT3HB4E1H0 165 aa16.93■□□□□ 0.3
SREBF1-213ENST00000485080 ERVH48-1M5A8F1 160 aa16.93■□□□□ 0.3
SREBF1-213ENST00000485080 KATNA1O75449 491 aa16.93■□□□□ 0.3
SREBF1-213ENST00000485080 SUPT3HO75486 399 aa16.93■□□□□ 0.3
SREBF1-213ENST00000485080 NUDT17P0C025 328 aa16.93■□□□□ 0.3
SREBF1-213ENST00000485080 C1GALT1C1LP0DN25 315 aa16.93■□□□□ 0.3
SREBF1-213ENST00000485080 GSTM2P28161 218 aa16.93■□□□□ 0.3
SREBF1-213ENST00000485080 GLRBP48167 497 aa16.93■□□□□ 0.3
SREBF1-213ENST00000485080 ALDH18A1P54886 795 aaKnown RBP16.93■□□□□ 0.3
SREBF1-213ENST00000485080 SETDB1Q15047 1291 aa16.93■□□□□ 0.3
SREBF1-213ENST00000485080 TBCCQ15814 346 aa16.93■□□□□ 0.3
SREBF1-213ENST00000485080 PDK4Q16654 411 aa16.93■□□□□ 0.3
SREBF1-213ENST00000485080 NDUFA9Q16795 377 aa16.93■□□□□ 0.3
SREBF1-213ENST00000485080 UGT8Q16880 541 aa16.93■□□□□ 0.3
SREBF1-213ENST00000485080 TMEM214Q6NUQ4 689 aaKnown RBP16.93■□□□□ 0.3
SREBF1-213ENST00000485080 TMPRSS11BQ86T26 416 aa16.93■□□□□ 0.3
SREBF1-213ENST00000485080 ASPGQ86U10 573 aa16.93■□□□□ 0.3
SREBF1-213ENST00000485080 NACC2Q96BF6 587 aa16.93■□□□□ 0.3
SREBF1-213ENST00000485080 UBL7Q96S82 380 aaPredicted RBP16.93■□□□□ 0.3
SREBF1-213ENST00000485080 MRPL57Q9BQC6 102 aaKnown RBP16.93■□□□□ 0.3
SREBF1-213ENST00000485080 ZFP69BQ9UJL9 534 aa16.93■□□□□ 0.3
SREBF1-213ENST00000485080 BSNQ9UPA5 3926 aa16.93■□□□□ 0.3
SREBF1-213ENST00000485080 BOD1L1Q8NFC6 3051 aa16.92■□□□□ 0.3
SREBF1-213ENST00000485080 IGLV3-12A0A075B6K2 115 aa16.92■□□□□ 0.3
SREBF1-213ENST00000485080 FEZF1A0PJY2 475 aa16.92■□□□□ 0.3
SREBF1-213ENST00000485080 K7EPI3 171 aa16.92■□□□□ 0.3
SREBF1-213ENST00000485080 H2AFYO75367 372 aaKnown RBP16.92■□□□□ 0.3
SREBF1-213ENST00000485080 SHBGP04278 402 aa16.92■□□□□ 0.3
SREBF1-213ENST00000485080 EPORP19235 508 aa16.92■□□□□ 0.3
SREBF1-213ENST00000485080 DSG2Q14126 1118 aa16.92■□□□□ 0.3
SREBF1-213ENST00000485080 NAA30Q147X3 362 aaPredicted RBP16.92■□□□□ 0.3
SREBF1-213ENST00000485080 PCBP2Q15366 365 aaKnown RBP eCLIP16.92■□□□□ 0.33e-14■■■■□ 26.5
SREBF1-213ENST00000485080 COX15Q7KZN9 410 aa16.92■□□□□ 0.3
SREBF1-213ENST00000485080 TMEM151AQ8N4L1 468 aa16.92■□□□□ 0.3
SREBF1-213ENST00000485080 MREGQ8N565 214 aa16.92■□□□□ 0.3
SREBF1-213ENST00000485080 ZNF740Q8NDX6 193 aa16.92■□□□□ 0.3
SREBF1-213ENST00000485080 TTLQ8NG68 377 aa16.92■□□□□ 0.3
SREBF1-213ENST00000485080 NT5CQ8TCD5 201 aa16.92■□□□□ 0.3
SREBF1-213ENST00000485080 ADAMTS17Q8TE56 1095 aa16.92■□□□□ 0.3
SREBF1-213ENST00000485080 SLC13A3Q8WWT9 602 aa16.92■□□□□ 0.3
SREBF1-213ENST00000485080 THAP4Q8WY91 577 aa16.92■□□□□ 0.3
SREBF1-213ENST00000485080 PARD6BQ9BYG5 372 aa16.92■□□□□ 0.3
SREBF1-213ENST00000485080 DRC3Q9H069 523 aa16.92■□□□□ 0.3
SREBF1-213ENST00000485080 SPNS1Q9H2V7 528 aa16.92■□□□□ 0.3
SREBF1-213ENST00000485080 ZNF304Q9HCX3 659 aa16.92■□□□□ 0.3
SREBF1-213ENST00000485080 ZNF358Q9NW07 568 aa16.92■□□□□ 0.3
SREBF1-213ENST00000485080 GEMIN8Q9NWZ8 242 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms