RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 STUB1Q9UNE7 303 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 IL16Q14005 1332 aa4.16□□□□□ -1.74
VPS13A-211ENST00000484581 A0A1W2PPI3 338 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 SLC15A5A6NIM6 579 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 BAG4O95429 457 aaKnown RBP4.15□□□□□ -1.75
VPS13A-211ENST00000484581 IFNB1P01574 187 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 APOHP02749 345 aaPredicted RBP4.15□□□□□ -1.75
VPS13A-211ENST00000484581 PGK2P07205 417 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 KRT3P12035 628 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 CDH1P12830 882 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 GP1BBP13224 206 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 NR1D1P20393 614 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 CDH3P22223 829 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 DGKAP23743 735 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 CHRNA3P32297 505 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 CNN1P51911 297 aaKnown RBP4.15□□□□□ -1.75
VPS13A-211ENST00000484581 HNRNPFP52597 415 aaKnown RBP4.15□□□□□ -1.75
VPS13A-211ENST00000484581 PITX1P78337 314 aaPredicted RBP4.15□□□□□ -1.75
VPS13A-211ENST00000484581 RPP38P78345 283 aaKnown RBP4.15□□□□□ -1.75
VPS13A-211ENST00000484581 RPL24P83731 157 aaKnown RBP4.15□□□□□ -1.75
VPS13A-211ENST00000484581 GCNT1Q02742 428 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 MBTD1Q05BQ5 628 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 TRAP1Q12931 704 aaKnown RBP4.15□□□□□ -1.75
VPS13A-211ENST00000484581 TAF10Q12962 218 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 DPYSQ14117 519 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 KIR2DS3Q14952 304 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 WSCD2Q2TBF2 565 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 EPC2Q52LR7 807 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 OLFM4Q6UX06 510 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 MCM10Q7L590 875 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 TAF8Q7Z7C8 310 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 SYVN1Q86TM6 617 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 SFR1Q86XK3 245 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 CROCCP3Q8IVE0 287 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 CDK20Q8IZL9 346 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 PRSS35Q8N3Z0 413 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 OR2T12Q8NG77 320 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 OR1J1Q8NGS3 322 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 OR52N5Q8NH56 324 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 LNX1Q8TBB1 728 aaPredicted RBP4.15□□□□□ -1.75
VPS13A-211ENST00000484581 SAP25Q8TEE9 199 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 PHLDA1Q8WV24 401 aaPredicted RBP4.15□□□□□ -1.75
VPS13A-211ENST00000484581 TMED6Q8WW62 240 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 C17orf77Q96MU5 243 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 NDNQ99608 321 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 MTMR12Q9C0I1 747 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 TSPY26PQ9H489 355 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 C10orf88Q9H8K7 445 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 EBF2Q9HAK2 575 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 NGBQ9NPG2 151 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 FGF21Q9NSA1 209 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 PIGVQ9NUD9 493 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 SLC38A7Q9NVC3 462 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 OCIAD1Q9NX40 245 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 TBK1Q9UHD2 729 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 RALYQ9UKM9 306 aaKnown RBP4.15□□□□□ -1.75
VPS13A-211ENST00000484581 LRP12Q9Y561 859 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 SMCHD1A6NHR9 2005 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 UBE4BO95155 1302 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 CGNL1Q0VF96 1302 aa4.15□□□□□ -1.75
VPS13A-211ENST00000484581 ANKRD61A6NGH8 418 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 C2orf81A6NN90 581 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 SRRM3A6NNA2 597 aaPredicted RBP4.14□□□□□ -1.75
VPS13A-211ENST00000484581 C4orf47A7E2U8 309 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 ZNF197O14709 1029 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 TEX28O15482 410 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 SYNGR3O43761 229 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 PEX11AO75192 247 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 GAS8O95995 478 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 RAF1P04049 648 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 CD59P13987 128 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 ZNF12P17014 697 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 DNAJB1P25685 340 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 SFTPDP35247 375 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 OR3A3P47888 321 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 FMO5P49326 533 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 HUNKP57058 714 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 FKBP1BP68106 108 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 TUBA1BP68363 451 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 PRKCEQ02156 737 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 GK2Q14410 553 aaPredicted RBP4.14□□□□□ -1.75
VPS13A-211ENST00000484581 KIF19Q2TAC6 998 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 ZC2HC1CQ53FD0 456 aaPredicted RBP4.14□□□□□ -1.75
VPS13A-211ENST00000484581 TEX35Q5T0J7 233 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 PRAMEF7Q5VXH5 474 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 OR6B2Q6IFH4 312 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 CTR9Q6PD62 1173 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 WDR88Q6ZMY6 472 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 SLC16A9Q7RTY1 509 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 PRUNE1Q86TP1 453 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 CCDC60Q8IWA6 550 aaPredicted RBP4.14□□□□□ -1.75
VPS13A-211ENST00000484581 TDHQ8IZJ6 230 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 SIDT2Q8NBJ9 832 aaKnown RBP4.14□□□□□ -1.75
VPS13A-211ENST00000484581 SLC24A4Q8NFF2 622 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 IPMKQ8NFU5 416 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 ASB5Q8WWX0 329 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 HSD17B8Q92506 261 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 RFT1Q96AA3 541 aa4.14□□□□□ -1.75
VPS13A-211ENST00000484581 PRMT1Q99873 361 aaKnown RBP4.14□□□□□ -1.75
VPS13A-211ENST00000484581 SPAG8Q99932 426 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms