RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 LAPTM4BQ86VI4 370 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 THOC6Q86W42 341 aaKnown RBP11.67□□□□□ -0.54
MSH5-216ENST00000484309 GALNT16Q8N428 558 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 ARHGEF39Q8N4T4 335 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 AMER3Q8N944 861 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 CLEC1AQ8NC01 280 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 KCT2Q8NC54 265 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 ZNF740Q8NDX6 193 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 OR9A4Q8NGU2 314 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 ATL1Q8WXF7 558 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 EXT2Q93063 718 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 NEIL2Q969S2 332 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 C8orf44Q96CB5 159 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 TSPAN17Q96FV3 270 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 FER1L6-AS2Q96M78 137 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 IP6K3Q96PC2 410 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 HAUS8Q9BT25 410 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 MFRPQ9BY79 579 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 PHACTR1Q9C0D0 580 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 DRC3Q9H069 523 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 POPDC3Q9HBV1 291 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 GPR83Q9NYM4 423 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 DMGDHQ9UI17 866 aaKnown RBP11.67□□□□□ -0.54
MSH5-216ENST00000484309 NXT1Q9UKK6 140 aaKnown RBP11.67□□□□□ -0.54
MSH5-216ENST00000484309 CDC14AQ9UNH5 594 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 NOVA2Q9UNW9 492 aaKnown RBP11.67□□□□□ -0.54
MSH5-216ENST00000484309 OARD1Q9Y530 152 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 PCDHGA9Q9Y5G4 932 aaKnown RBP11.67□□□□□ -0.54
MSH5-216ENST00000484309 HS3ST3B1Q9Y662 390 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 SHANK1Q9Y566 2161 aa11.67□□□□□ -0.54
MSH5-216ENST00000484309 CPAMD8Q8IZJ3 1885 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 TXNDC9O14530 226 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 OR1F1O43749 312 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 SERPIND1P05546 499 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 STMN1P16949 149 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 ITGA3P26006 1051 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 STX2P32856 288 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 SPRP35270 261 aaPredicted RBP11.66□□□□□ -0.54
MSH5-216ENST00000484309 GRK3P35626 688 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 GDF5P43026 501 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 CCR8P51685 355 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 EMP3P54852 163 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 MLLT10P55197 1068 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 RELAQ04206 551 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 EEF1A2Q05639 463 aaKnown RBP11.66□□□□□ -0.54
MSH5-216ENST00000484309 BMPR2Q13873 1038 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 CSHL1Q14406 222 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 NDUFA9Q16795 377 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 GARNL3Q5VVW2 1013 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 KIRREL2Q6UWL6 708 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 TMPRSS11BQ86T26 416 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 ASPGQ86U10 573 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 MMGT1Q8N4V1 131 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 MFSD9Q8NBP5 474 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 SLC5A11Q8WWX8 675 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 IFT81Q8WYA0 676 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 MOCOSQ96EN8 888 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 DERL2Q9GZP9 239 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 MLXIPLQ9NP71 852 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 HCN3Q9P1Z3 774 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 C3orf18Q9UK00 162 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 G3BP2Q9UN86 482 aaKnown RBP11.66□□□□□ -0.54
MSH5-216ENST00000484309 SLC22A14Q9Y267 594 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 DYRK1BQ9Y463 629 aa11.66□□□□□ -0.54
MSH5-216ENST00000484309 KCNE1BA0A087WTH5 132 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 CTAGE15A4D2H0 777 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 ZNF860A6NHJ4 632 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 SGK494L7N484 410 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 PRPF4O43172 522 aaKnown RBP eCLIP11.65□□□□□ -0.54
MSH5-216ENST00000484309 NDUFS4O43181 175 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 JRKO75564 520 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 WDR47O94967 919 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 B3GALT4O96024 378 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 CTAGE8P0CG41 777 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 CD1DP15813 335 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 VARSP26640 1264 aaKnown RBP11.65□□□□□ -0.54
MSH5-216ENST00000484309 SLC26A3P40879 764 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 AVPR1BP47901 424 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 RAB10P61026 200 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 OR4D1Q15615 310 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 UAP1Q16222 522 aaPredicted RBP11.65□□□□□ -0.54
MSH5-216ENST00000484309 IGFBP7Q16270 282 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 TUBB8Q3ZCM7 444 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 GRTP1Q5TC63 336 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 MFSD4BQ5TF39 518 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 RAPH1Q70E73 1250 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 CTAGE6Q86UF2 777 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 ZC3H7AQ8IWR0 971 aaKnown RBP11.65□□□□□ -0.54
MSH5-216ENST00000484309 CTAGE4Q8IX94 777 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 PARP9Q8IXQ6 854 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 AMER2Q8N7J2 671 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 CAMKVQ8NCB2 501 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 ABHD11Q8NFV4 315 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 OR11G2Q8NGC1 345 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 SLC13A3Q8WWT9 602 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 ANKRD7Q92527 254 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 ESAMQ96AP7 390 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 RHBDF1Q96CC6 855 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 TM4SF19Q96DZ7 209 aa11.65□□□□□ -0.54
MSH5-216ENST00000484309 THAP11Q96EK4 314 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms