RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.02■□□□□ 0.64
LIMS2-215ENST00000484252 SPATA7Q9P0W8 599 aa19.02■□□□□ 0.64
LIMS2-215ENST00000484252 CD84Q9UIB8 345 aa19.02■□□□□ 0.64
LIMS2-215ENST00000484252 FAM32AQ9Y421 112 aaKnown RBP19.02■□□□□ 0.64
LIMS2-215ENST00000484252 PSIP1O75475 530 aaKnown RBP19.02■□□□□ 0.63
LIMS2-215ENST00000484252 DIRAS1O95057 198 aa19.02■□□□□ 0.63
LIMS2-215ENST00000484252 ABCB1P08183 1280 aaPredicted RBP19.02■□□□□ 0.63
LIMS2-215ENST00000484252 LAMP1P11279 417 aa19.02■□□□□ 0.63
LIMS2-215ENST00000484252 MASP1P48740 699 aa19.02■□□□□ 0.63
LIMS2-215ENST00000484252 NPRL3Q12980 569 aa19.02■□□□□ 0.63
LIMS2-215ENST00000484252 DOC2AQ14183 400 aa19.02■□□□□ 0.63
LIMS2-215ENST00000484252 TRIM16LQ309B1 348 aa19.02■□□□□ 0.63
LIMS2-215ENST00000484252 CPTPQ5TA50 214 aa19.02■□□□□ 0.63
LIMS2-215ENST00000484252 BRAT1Q6PJG6 821 aa19.02■□□□□ 0.63
LIMS2-215ENST00000484252 RNF175Q8N4F7 328 aa19.02■□□□□ 0.63
LIMS2-215ENST00000484252 C17orf50Q8WW18 174 aa19.02■□□□□ 0.63
LIMS2-215ENST00000484252 NEURL2Q9BR09 285 aa19.02■□□□□ 0.63
LIMS2-215ENST00000484252 GABARAPL3Q9BY60 117 aa19.02■□□□□ 0.63
LIMS2-215ENST00000484252 MROQ9BYG7 248 aa19.02■□□□□ 0.63
LIMS2-215ENST00000484252 CHST8Q9H2A9 424 aa19.02■□□□□ 0.63
LIMS2-215ENST00000484252 EPS8L2Q9H6S3 715 aa19.02■□□□□ 0.63
LIMS2-215ENST00000484252 PCDH12Q9NPG4 1184 aa19.02■□□□□ 0.63
LIMS2-215ENST00000484252 RAD18Q9NS91 495 aa19.02■□□□□ 0.63
LIMS2-215ENST00000484252 SPG21Q9NZD8 308 aa19.02■□□□□ 0.63
LIMS2-215ENST00000484252 CARNS1A5YM72 827 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 SGTAO43765 313 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 C1QCP02747 245 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 PSMB9P28065 219 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 VIPR1P32241 457 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 HPCAL1P37235 193 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 FADDQ13158 208 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 BCL2A1Q16548 175 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 PDE12Q6L8Q7 609 aaKnown RBP19.01■□□□□ 0.63
LIMS2-215ENST00000484252 CCDC81Q6ZN84 652 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 MICAL3Q7RTP6 2002 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 GALNT10Q86SR1 603 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 TMC8Q8IU68 726 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 PHF10Q8WUB8 498 aaKnown RBP19.01■□□□□ 0.63
LIMS2-215ENST00000484252 AUTS2Q8WXX7 1259 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 SH3KBP1Q96B97 665 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 C7orf34Q96L11 122 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 DPH2Q9BQC3 489 aaPredicted RBP19.01■□□□□ 0.63
LIMS2-215ENST00000484252 FAM83CQ9BQN1 747 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 GIN1Q9NXP7 522 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 FZD4Q9ULV1 537 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 ERVK-11Q9UQG0 969 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 PADI2Q9Y2J8 665 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 PCDHGB3Q9Y5G1 929 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 ARHGEF33A8MVX0 844 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 WASH3PC4AMC7 463 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 E7EQ34 232 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 SUV39H1O43463 412 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 MAN1A2O60476 641 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 NADKO95544 446 aaPredicted RBP19.01■□□□□ 0.63
LIMS2-215ENST00000484252 FSHRP23945 695 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 PCGF2P35227 344 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 MAPK9P45984 424 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 RPP38P78345 283 aaKnown RBP19.01■□□□□ 0.63
LIMS2-215ENST00000484252 OXA1LQ15070 435 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 TEAD4Q15561 434 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 IQCCQ4KMZ1 466 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 ADCK1Q86TW2 530 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 NDNFQ8TB73 568 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 DYNC2LI1Q8TCX1 351 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 FCGR1BQ92637 280 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 ALPK1Q96QP1 1244 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 MTERF1Q99551 399 aaKnown RBP19.01■□□□□ 0.63
LIMS2-215ENST00000484252 ANKHQ9HCJ1 492 aa19.01■□□□□ 0.63
LIMS2-215ENST00000484252 C1orf226A1L170 272 aa19■□□□□ 0.63
LIMS2-215ENST00000484252 AXIN1O15169 862 aa19■□□□□ 0.63
LIMS2-215ENST00000484252 YY2O15391 372 aa19■□□□□ 0.63
LIMS2-215ENST00000484252 TEX28O15482 410 aa19■□□□□ 0.63
LIMS2-215ENST00000484252 FADS2O95864 444 aaKnown RBP19■□□□□ 0.63
LIMS2-215ENST00000484252 LAG3P18627 525 aa19■□□□□ 0.63
LIMS2-215ENST00000484252 KRT20P35900 424 aa19■□□□□ 0.63
LIMS2-215ENST00000484252 CREMQ03060 361 aa19■□□□□ 0.63
LIMS2-215ENST00000484252 CAMK2GQ13555 558 aaPredicted RBP19■□□□□ 0.63
LIMS2-215ENST00000484252 SPIN4Q56A73 249 aa19■□□□□ 0.63
LIMS2-215ENST00000484252 AGTRAPQ6RW13 159 aa19■□□□□ 0.63
LIMS2-215ENST00000484252 NPAS3Q8IXF0 933 aa19■□□□□ 0.63
LIMS2-215ENST00000484252 HS6ST3Q8IZP7 471 aa19■□□□□ 0.63
LIMS2-215ENST00000484252 TRAM1L1Q8N609 369 aa19■□□□□ 0.63
LIMS2-215ENST00000484252 CDC26Q8NHZ8 85 aa19■□□□□ 0.63
LIMS2-215ENST00000484252 COQ8BQ96D53 544 aa19■□□□□ 0.63
LIMS2-215ENST00000484252 CXorf40BQ96DE9 158 aa19■□□□□ 0.63
LIMS2-215ENST00000484252 TPD52L3Q96J77 140 aa19■□□□□ 0.63
LIMS2-215ENST00000484252 HRASLS5Q96KN8 279 aa19■□□□□ 0.63
LIMS2-215ENST00000484252 SGK2Q9HBY8 427 aa19■□□□□ 0.63
LIMS2-215ENST00000484252 NFKBIL1Q9UBC1 381 aaPredicted RBP19■□□□□ 0.63
LIMS2-215ENST00000484252 DAPK2Q9UIK4 370 aa19■□□□□ 0.63
LIMS2-215ENST00000484252 VPS4AQ9UN37 437 aa19■□□□□ 0.63
LIMS2-215ENST00000484252 TRIM17Q9Y577 477 aa19■□□□□ 0.63
LIMS2-215ENST00000484252 GPC6Q9Y625 555 aaPredicted RBP19■□□□□ 0.63
LIMS2-215ENST00000484252 KRT87PA6NCN2 255 aa18.99■□□□□ 0.63
LIMS2-215ENST00000484252 CLDN24A6NM45 220 aa18.99■□□□□ 0.63
LIMS2-215ENST00000484252 MTX2O75431 263 aa18.99■□□□□ 0.63
LIMS2-215ENST00000484252 CATP04040 527 aaKnown RBP18.99■□□□□ 0.63
LIMS2-215ENST00000484252 PNLIPRP1P54315 467 aa18.99■□□□□ 0.63
LIMS2-215ENST00000484252 KCNJ10P78508 379 aa18.99■□□□□ 0.63
LIMS2-215ENST00000484252 DDX39BQ13838 428 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms