RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 SEC16AO15027 2179 aa25.41■■□□□ 1.66
SMDT1-203ENST00000484235 TRBC2A0A5B9 178 aa25.4■■□□□ 1.66
SMDT1-203ENST00000484235 SUPT3HB4E1H0 165 aa25.4■■□□□ 1.66
SMDT1-203ENST00000484235 SUPT3HO75486 399 aa25.4■■□□□ 1.66
SMDT1-203ENST00000484235 ITGAXP20702 1163 aa25.4■■□□□ 1.66
SMDT1-203ENST00000484235 BCL6P41182 706 aa25.4■■□□□ 1.66
SMDT1-203ENST00000484235 HSPA7P48741 367 aa25.4■■□□□ 1.66
SMDT1-203ENST00000484235 RPS18P62269 152 aaKnown RBP25.4■■□□□ 1.66
SMDT1-203ENST00000484235 CDC20Q12834 499 aa25.4■■□□□ 1.66
SMDT1-203ENST00000484235 CDC16Q13042 620 aa25.4■■□□□ 1.66
SMDT1-203ENST00000484235 ERV3-1Q14264 604 aa25.4■■□□□ 1.66
SMDT1-203ENST00000484235 WDR93Q6P2C0 686 aa25.4■■□□□ 1.66
SMDT1-203ENST00000484235 PRMT9Q6P2P2 845 aa25.4■■□□□ 1.66
SMDT1-203ENST00000484235 VN1R4Q7Z5H5 301 aa25.4■■□□□ 1.66
SMDT1-203ENST00000484235 MFSD9Q8NBP5 474 aa25.4■■□□□ 1.66
SMDT1-203ENST00000484235 TM4SF19Q96DZ7 209 aa25.4■■□□□ 1.66
SMDT1-203ENST00000484235 C10orf90Q96M02 699 aa25.4■■□□□ 1.66
SMDT1-203ENST00000484235 CD244Q9BZW8 370 aa25.4■■□□□ 1.66
SMDT1-203ENST00000484235 DNAJC11Q9NVH1 559 aa25.4■■□□□ 1.66
SMDT1-203ENST00000484235 GPRC5BQ9NZH0 403 aa25.4■■□□□ 1.66
SMDT1-203ENST00000484235 PADI2Q9Y2J8 665 aa25.4■■□□□ 1.66
SMDT1-203ENST00000484235 HEATR5BQ9P2D3 2071 aa25.4■■□□□ 1.66
SMDT1-203ENST00000484235 IQANK1A0A1B0GTG1 560 aa25.39■■□□□ 1.66
SMDT1-203ENST00000484235 ERVH48-1M5A8F1 160 aa25.39■■□□□ 1.66
SMDT1-203ENST00000484235 UBXN8O00124 270 aa25.39■■□□□ 1.66
SMDT1-203ENST00000484235 MAP2K7O14733 419 aa25.39■■□□□ 1.66
SMDT1-203ENST00000484235 OR1F1O43749 312 aa25.39■■□□□ 1.66
SMDT1-203ENST00000484235 MED26O95402 600 aa25.39■■□□□ 1.66
SMDT1-203ENST00000484235 MTHFD2P13995 350 aa25.39■■□□□ 1.66
SMDT1-203ENST00000484235 NFKB2Q00653 900 aa25.39■■□□□ 1.66
SMDT1-203ENST00000484235 MEF2AQ02078 507 aaPredicted RBP25.39■■□□□ 1.66
SMDT1-203ENST00000484235 PLD6Q8N2A8 252 aaKnown RBP25.39■■□□□ 1.66
SMDT1-203ENST00000484235 ARHGEF39Q8N4T4 335 aa25.39■■□□□ 1.66
SMDT1-203ENST00000484235 CAMKVQ8NCB2 501 aa25.39■■□□□ 1.66
SMDT1-203ENST00000484235 MVB12AQ96EY5 273 aa25.39■■□□□ 1.66
SMDT1-203ENST00000484235 AIF1LQ9BQI0 150 aa25.39■■□□□ 1.66
SMDT1-203ENST00000484235 SLC22A11Q9NSA0 550 aa25.39■■□□□ 1.66
SMDT1-203ENST00000484235 PSMC3IPQ9P2W1 217 aaPredicted RBP25.39■■□□□ 1.66
SMDT1-203ENST00000484235 CDC14AQ9UNH5 594 aa25.39■■□□□ 1.66
SMDT1-203ENST00000484235 COL6A6A6NMZ7 2263 aa25.39■■□□□ 1.65
SMDT1-203ENST00000484235 P2RX6O15547 441 aa25.38■■□□□ 1.65
SMDT1-203ENST00000484235 H2AFYO75367 372 aaKnown RBP25.38■■□□□ 1.65
SMDT1-203ENST00000484235 RFPL1O75677 317 aa25.38■■□□□ 1.65
SMDT1-203ENST00000484235 ALBP02768 609 aa25.38■■□□□ 1.65
SMDT1-203ENST00000484235 RBP1P09455 135 aa25.38■■□□□ 1.65
SMDT1-203ENST00000484235 DEKP35659 375 aaKnown RBP25.38■■□□□ 1.65
SMDT1-203ENST00000484235 SLC9A5Q14940 896 aa25.38■■□□□ 1.65
SMDT1-203ENST00000484235 UGT8Q16880 541 aa25.38■■□□□ 1.65
SMDT1-203ENST00000484235 TSNAXIP1Q2TAA8 658 aa25.38■■□□□ 1.65
SMDT1-203ENST00000484235 FBXO48Q5FWF7 155 aa25.38■■□□□ 1.65
SMDT1-203ENST00000484235 MRPL14Q6P1L8 145 aaKnown RBP25.38■■□□□ 1.65
SMDT1-203ENST00000484235 SLCO4C1Q6ZQN7 724 aa25.38■■□□□ 1.65
SMDT1-203ENST00000484235 OVCH1Q7RTY7 1134 aa25.38■■□□□ 1.65
SMDT1-203ENST00000484235 TMPRSS11BQ86T26 416 aa25.38■■□□□ 1.65
SMDT1-203ENST00000484235 ASPGQ86U10 573 aa25.38■■□□□ 1.65
SMDT1-203ENST00000484235 SLC13A3Q8WWT9 602 aa25.38■■□□□ 1.65
SMDT1-203ENST00000484235 TTC9Q92623 222 aa25.38■■□□□ 1.65
SMDT1-203ENST00000484235 ESAMQ96AP7 390 aa25.38■■□□□ 1.65
SMDT1-203ENST00000484235 FKBP10Q96AY3 582 aa25.38■■□□□ 1.65
SMDT1-203ENST00000484235 WBP1Q96G27 269 aa25.38■■□□□ 1.65
SMDT1-203ENST00000484235 PPCSQ9HAB8 311 aa25.38■■□□□ 1.65
SMDT1-203ENST00000484235 ZNF304Q9HCX3 659 aa25.38■■□□□ 1.65
SMDT1-203ENST00000484235 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.38■■□□□ 1.65
SMDT1-203ENST00000484235 V9GYY5 206 aaPredicted RBP25.38■■□□□ 1.65
SMDT1-203ENST00000484235 KLF7O75840 302 aaPredicted RBP25.37■■□□□ 1.65
SMDT1-203ENST00000484235 C1GALT1C1LP0DN25 315 aa25.37■■□□□ 1.65
SMDT1-203ENST00000484235 CXCR2P25025 360 aa25.37■■□□□ 1.65
SMDT1-203ENST00000484235 OR1D4P47884 311 aa25.37■■□□□ 1.65
SMDT1-203ENST00000484235 FAM53BQ14153 422 aa25.37■■□□□ 1.65
SMDT1-203ENST00000484235 TBR1Q16650 682 aa25.37■■□□□ 1.65
SMDT1-203ENST00000484235 NDUFA9Q16795 377 aa25.37■■□□□ 1.65
SMDT1-203ENST00000484235 ERCC6LQ2NKX8 1250 aa25.37■■□□□ 1.65
SMDT1-203ENST00000484235 ATG9BQ674R7 924 aa25.37■■□□□ 1.65
SMDT1-203ENST00000484235 ZNF605Q86T29 641 aa25.37■■□□□ 1.65
SMDT1-203ENST00000484235 ZNF740Q8NDX6 193 aa25.37■■□□□ 1.65
SMDT1-203ENST00000484235 ZNF358Q9NW07 568 aa25.37■■□□□ 1.65
SMDT1-203ENST00000484235 SHBGP04278 402 aa25.36■■□□□ 1.65
SMDT1-203ENST00000484235 ATXN8OSP0DMR3 200 aa25.36■■□□□ 1.65
SMDT1-203ENST00000484235 AHRP35869 848 aa25.36■■□□□ 1.65
SMDT1-203ENST00000484235 SCTRP47872 440 aa25.36■■□□□ 1.65
SMDT1-203ENST00000484235 REEP5Q00765 189 aa25.36■■□□□ 1.65
SMDT1-203ENST00000484235 PWP1Q13610 501 aa25.36■■□□□ 1.65
SMDT1-203ENST00000484235 PDK4Q16654 411 aa25.36■■□□□ 1.65
SMDT1-203ENST00000484235 ATP1A1-AS1Q5TC04 95 aa25.36■■□□□ 1.65
SMDT1-203ENST00000484235 BORAQ6PGQ7 559 aa25.36■■□□□ 1.65
SMDT1-203ENST00000484235 LRRC70Q7Z2Q7 622 aa25.36■■□□□ 1.65
SMDT1-203ENST00000484235 DTWD1Q8N5C7 304 aa25.36■■□□□ 1.65
SMDT1-203ENST00000484235 METTL27Q8N6F8 245 aaPredicted RBP25.36■■□□□ 1.65
SMDT1-203ENST00000484235 SNX31Q8N9S9 440 aa25.36■■□□□ 1.65
SMDT1-203ENST00000484235 UBTD2Q8WUN7 234 aa25.36■■□□□ 1.65
SMDT1-203ENST00000484235 ZDHHC19Q8WVZ1 309 aaPredicted RBP25.36■■□□□ 1.65
SMDT1-203ENST00000484235 EXTL1Q92935 676 aa25.36■■□□□ 1.65
SMDT1-203ENST00000484235 COL26A1Q96A83 441 aa25.36■■□□□ 1.65
SMDT1-203ENST00000484235 DRC3Q9H069 523 aa25.36■■□□□ 1.65
SMDT1-203ENST00000484235 SLC26A1Q9H2B4 701 aa25.36■■□□□ 1.65
SMDT1-203ENST00000484235 EHD1Q9H4M9 534 aa25.36■■□□□ 1.65
SMDT1-203ENST00000484235 WDR54Q9H977 334 aa25.36■■□□□ 1.65
SMDT1-203ENST00000484235 ZFP69BQ9UJL9 534 aa25.36■■□□□ 1.65
SMDT1-203ENST00000484235 MAU2Q9Y6X3 613 aa25.36■■□□□ 1.65
SMDT1-203ENST00000484235 CDC14CA4D256 554 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms