RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 NHEJ1Q9H9Q4 299 aaPredicted RBP10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 TAC3Q9UHF0 121 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 PCYOX1Q9UHG3 505 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 TFR2Q9UP52 801 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 PLEKHA6Q9Y2H5 1048 aa10.22□□□□□ -0.77
SMARCC1-205ENST00000483847 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.22□□□□□ -0.771e-12■■□□□ 12.6
SMARCC1-205ENST00000483847 PHF3Q92576 2039 aaKnown RBP10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 SCN3AQ9NY46 2000 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 FAM237BA0A1B0GVD1 139 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 NDC80O14777 642 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 HAT1O14929 419 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 TFECO14948 347 aaPredicted RBP10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 ERGP11308 486 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 EZRP15311 586 aaKnown RBP10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 TFEBP19484 476 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 RPA3P35244 121 aaPredicted RBP10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 CCNFP41002 786 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 MEOX1P50221 254 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 ITGA8P53708 1063 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 HADHBP55084 474 aaKnown RBP10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 NUP107P57740 925 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 ACVR1Q04771 509 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 PMPCAQ10713 525 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 PTK6Q13882 451 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 SNTB1Q13884 538 aaKnown RBP10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 NAA25Q14CX7 972 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 SKOR2Q2VWA4 1001 aaPredicted RBP10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 FASTKD1Q53R41 847 aaKnown RBP10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 TSTD2Q5T7W7 516 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 ICE2Q659A1 982 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 PTRHD1Q6GMV3 140 aaKnown RBP10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 TMEM211Q6ICI0 200 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 RPS19BP1Q86WX3 136 aaKnown RBP10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 ZZZ3Q8IYH5 903 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 GSDMBQ8TAX9 411 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 TSLPQ969D9 159 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 CCDC42Q96M95 316 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 ANP32EQ9BTT0 268 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 RBCK1Q9BYM8 510 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 OSBPL8Q9BZF1 889 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 P2RY12Q9H244 342 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 TP63Q9H3D4 680 aaPredicted RBP10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 SPATA7Q9P0W8 599 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 L3MBTL1Q9Y468 752 aa10.21□□□□□ -0.77
SMARCC1-205ENST00000483847 COL6A5A8TX70 2615 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 ARHGEF33A8MVX0 844 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 H0YIG0 161 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 SGK494L7N484 410 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 PRMT5O14744 637 aaPredicted RBP10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 CDC123O75794 336 aaPredicted RBP10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 PDE9AO76083 593 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 NSA2O95478 260 aaKnown RBP10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 CYC1P08574 325 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 PKMP14618 531 aaKnown RBP10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 IL1RNP18510 177 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 GRIA1P42261 906 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 AGTR2P50052 363 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 GDF10P55107 478 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 SLC26A5P58743 744 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 COPS2P61201 443 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 RHAGQ02094 409 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 PRDX1Q06830 199 aaKnown RBP10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 USP10Q14694 798 aaKnown RBP10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 ABRAXAS2Q15018 415 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 TMEM198Q66K66 360 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 VN1R4Q7Z5H5 301 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 SULF2Q8IWU5 870 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 LGI4Q8N135 537 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 PPFIBP2Q8ND30 876 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 WFDC11Q8NEX6 87 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 OR9A1PQ8NGU1 263 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 ELP5Q8TE02 316 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 SMPDL3AQ92484 453 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 CCDC138Q96M89 665 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 PWWP2AQ96N64 755 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 LPAR4Q99677 370 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 GPATCH1Q9BRR8 931 aaKnown RBP10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 ABCF3Q9NUQ8 709 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 ZNHIT6Q9NWK9 470 aaKnown RBP10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 INTUQ9ULD6 942 aa10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.2□□□□□ -0.78
SMARCC1-205ENST00000483847 ZNF407Q9C0G0 2248 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 STAB1Q9NY15 2570 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 USP27XA6NNY8 438 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 KIAA1324LA8MWY0 1029 aaPredicted RBP10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 TXNDC9O14530 226 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 PRMT3O60678 531 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 MATN4O95460 622 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 MBD3O95983 291 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 DNASE1P24855 282 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 BCL6P41182 706 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 CYB561P49447 251 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 TAS2R50P59544 299 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 PRAMEP78395 509 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 ACTN3Q08043 901 aaPredicted RBP10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 NSDHLQ15738 373 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 NDUFA9Q16795 377 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 CTSL3PQ5NE16 218 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 C11orf63Q6NUN7 778 aa10.19□□□□□ -0.78
SMARCC1-205ENST00000483847 OTOAQ7RTW8 1153 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms