RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 SNRNP200O75643 2136 aaKnown RBP11.15□□□□□ -0.62
HPS4-212ENST00000481910 RFPL3O75679 317 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 CHN1P15882 459 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 EPB42P16452 691 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 MPSTP25325 297 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 CCNG1P51959 295 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 NAGLUP54802 743 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 RAB15P59190 212 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 DNAJB13P59910 316 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 DSTNP60981 165 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 YBX1P67809 324 aaKnown RBP11.15□□□□□ -0.62
HPS4-212ENST00000481910 PRDX1Q06830 199 aaKnown RBP11.15□□□□□ -0.62
HPS4-212ENST00000481910 ASPHQ12797 758 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 PDK4Q16654 411 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 TUSC1Q2TAM9 212 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 ZNF678Q5SXM1 525 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 C10orf62Q5T681 223 aaPredicted RBP11.15□□□□□ -0.62
HPS4-212ENST00000481910 METTL2BQ6P1Q9 378 aaKnown RBP11.15□□□□□ -0.62
HPS4-212ENST00000481910 CYB5D1Q6P9G0 228 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 SPESP1Q6UW49 350 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 LCTLQ6UWM7 567 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 FAM92BQ6ZTR7 304 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 RPS27LQ71UM5 84 aaKnown RBP11.15□□□□□ -0.62
HPS4-212ENST00000481910 LRRC70Q7Z2Q7 622 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 SNX31Q8N9S9 440 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 FAM122AQ96E09 287 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 L3HYPDHQ96EM0 354 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 NRBF2Q96F24 287 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 NUDT22Q9BRQ3 303 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 HAUS8Q9BT25 410 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 TWSG1Q9GZX9 223 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 SERHL2Q9H4I8 314 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 EPHA6Q9UF33 1036 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 POMT2Q9UKY4 750 aa11.15□□□□□ -0.62
HPS4-212ENST00000481910 ZNF292O60281 2723 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 A0A1B0GVG6 124 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 RPS17P08708 135 aaKnown RBP11.14□□□□□ -0.63
HPS4-212ENST00000481910 CEACAM1P13688 526 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 HOXB3P14651 431 aaPredicted RBP11.14□□□□□ -0.63
HPS4-212ENST00000481910 PORP16435 677 aaPredicted RBP11.14□□□□□ -0.63
HPS4-212ENST00000481910 CDH3P22223 829 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 CMPK1P30085 196 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 CSF2RBP32927 897 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 ATP1A2P50993 1020 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 CDH13P55290 713 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 GFERP55789 205 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 BPIFB3P59826 476 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 MXRA7P84157 204 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 E2F1Q01094 437 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 GTF2H2Q13888 395 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 UNC50Q53HI1 259 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 GTF2H2CQ6P1K8 395 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 TMEM71Q6P5X7 295 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 ALYREFQ86V81 257 aaKnown RBP11.14□□□□□ -0.63
HPS4-212ENST00000481910 C17orf64Q86WR6 236 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 KLHDC8AQ8IYD2 350 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 ARFGAP2Q8N6H7 521 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 OR2L3Q8NG85 312 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 WDR48Q8TAF3 677 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 FLVCR1-AS1Q8TAF5 88 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 NEIL2Q969S2 332 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 PPM1MQ96MI6 270 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 NSUN5Q96P11 429 aaKnown RBP11.14□□□□□ -0.63
HPS4-212ENST00000481910 MAP3K3Q99759 626 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 C1QTNF3Q9BXJ4 246 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 FAM192AQ9GZU8 254 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 IPPKQ9H8X2 491 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 MRPS30Q9NP92 439 aaKnown RBP11.14□□□□□ -0.63
HPS4-212ENST00000481910 SEMA4BQ9NPR2 832 aaPredicted RBP11.14□□□□□ -0.63
HPS4-212ENST00000481910 INTS9Q9NV88 658 aaKnown RBP11.14□□□□□ -0.63
HPS4-212ENST00000481910 CUEDC1Q9NWM3 386 aaPredicted RBP11.14□□□□□ -0.63
HPS4-212ENST00000481910 TOR4AQ9NXH8 423 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 NDUFA13Q9P0J0 144 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 TMEM9Q9P0T7 183 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 PCTPQ9UKL6 214 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 DYRK1BQ9Y463 629 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 PCDHGA1Q9Y5H4 931 aa11.14□□□□□ -0.63
HPS4-212ENST00000481910 SPAARA0A1B0GVQ0 90 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 NTN3O00634 580 aaPredicted RBP11.13□□□□□ -0.63
HPS4-212ENST00000481910 HAT1O14929 419 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 KATNA1O75449 491 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 CCNDBP1O95273 360 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 C9P02748 559 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 GNAZP19086 355 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 PIK3CGP48736 1102 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 NOVA1P51513 510 aaKnown RBP11.13□□□□□ -0.63
HPS4-212ENST00000481910 SIM1P81133 766 aaPredicted RBP11.13□□□□□ -0.63
HPS4-212ENST00000481910 CLCQ05315 142 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 CDC16Q13042 620 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 SLC5A12Q1EHB4 618 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 RSPO4Q2I0M5 234 aaPredicted RBP11.13□□□□□ -0.63
HPS4-212ENST00000481910 SNAP47Q5SQN1 464 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 KIAA1614Q5VZ46 1190 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 ZCCHC23Q6ZST2 131 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 TMPRSS9Q7Z410 1059 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 GOLGA7Q7Z5G4 137 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 GFM2Q969S9 779 aaKnown RBP11.13□□□□□ -0.63
HPS4-212ENST00000481910 ATP6V1E2Q96A05 226 aa11.13□□□□□ -0.63
HPS4-212ENST00000481910 RBM14Q96PK6 669 aaKnown RBP11.13□□□□□ -0.63
HPS4-212ENST00000481910 DPYSL5Q9BPU6 564 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms