RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 SSUH2Q9Y2M2 353 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 PLLPQ9Y342 182 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 ANGPTL3Q9Y5C1 460 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 ACTL7BQ9Y614 415 aa18.85■□□□□ 0.61
LIME1-205ENST00000480139 LRRC14BA6NHZ5 514 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 G3V2L1 256 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 TAF4O00268 1085 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 RRP8O43159 456 aaKnown RBP18.84■□□□□ 0.61
LIME1-205ENST00000480139 OR1F1O43749 312 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 LCMT2O60294 686 aaKnown RBP18.84■□□□□ 0.61
LIME1-205ENST00000480139 UGDHO60701 494 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 PRAMEF4O60810 478 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 WFS1O76024 890 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 MYZAPP0CAP1 466 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 VARSP26640 1264 aaKnown RBP18.84■□□□□ 0.61
LIME1-205ENST00000480139 PRKAA2P54646 552 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 HERVK_113P63132 956 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 MEF2AQ02078 507 aaPredicted RBP18.84■□□□□ 0.61
LIME1-205ENST00000480139 IRF8Q02556 426 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 ABHD18Q0P651 414 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 XKR6Q5GH73 641 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 PAGE2BQ5JRK9 111 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 GARNL3Q5VVW2 1013 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 PRAMEF9Q5VWM5 478 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 CACNA2D3Q8IZS8 1091 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 DSELQ8IZU8 1212 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 KRT78Q8N1N4 520 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 CAMKVQ8NCB2 501 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 ZNF740Q8NDX6 193 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 TTLQ8NG68 377 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 CLIP3Q96DZ5 547 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 RUFY1Q96T51 708 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 ERVK-6Q9BXR3 956 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 NLNQ9BYT8 704 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 FAM117AQ9C073 453 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 SLC7A5P2Q9GIP4 190 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 ZFP69BQ9UJL9 534 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 RAXQ9Y2V3 346 aa18.84■□□□□ 0.61
LIME1-205ENST00000480139 A0A087WV48 116 aa18.83■□□□□ 0.6
LIME1-205ENST00000480139 HYKKA2RU49 373 aa18.83■□□□□ 0.6
LIME1-205ENST00000480139 EIF2S1P05198 315 aaKnown RBP18.83■□□□□ 0.6
LIME1-205ENST00000480139 SLC35G6P0C7Q6 338 aa18.83■□□□□ 0.6
LIME1-205ENST00000480139 CCNYL3P0C7X3 344 aa18.83■□□□□ 0.6
LIME1-205ENST00000480139 MYL2P10916 166 aa18.83■□□□□ 0.6
LIME1-205ENST00000480139 IMPDH1P20839 514 aa18.83■□□□□ 0.6
LIME1-205ENST00000480139 STAT5AP42229 794 aa18.83■□□□□ 0.6
LIME1-205ENST00000480139 GPS2Q13227 327 aa18.83■□□□□ 0.6
LIME1-205ENST00000480139 CHIT1Q13231 466 aa18.83■□□□□ 0.6
LIME1-205ENST00000480139 PWP1Q13610 501 aa18.83■□□□□ 0.6
LIME1-205ENST00000480139 DOC2AQ14183 400 aa18.83■□□□□ 0.6
LIME1-205ENST00000480139 SLBPQ14493 270 aaKnown RBP eCLIP18.83■□□□□ 0.6
LIME1-205ENST00000480139 ZNF385CQ66K41 422 aaPredicted RBP18.83■□□□□ 0.6
LIME1-205ENST00000480139 TMIGD1Q6UXZ0 262 aa18.83■□□□□ 0.6
LIME1-205ENST00000480139 GOLGA7Q7Z5G4 137 aa18.83■□□□□ 0.6
LIME1-205ENST00000480139 ASPGQ86U10 573 aa18.83■□□□□ 0.6
LIME1-205ENST00000480139 ARHGEF39Q8N4T4 335 aa18.83■□□□□ 0.6
LIME1-205ENST00000480139 ZNF483Q8TF39 744 aaPredicted RBP18.83■□□□□ 0.6
LIME1-205ENST00000480139 L3HYPDHQ96EM0 354 aa18.83■□□□□ 0.6
LIME1-205ENST00000480139 PKNOX2Q96KN3 472 aa18.83■□□□□ 0.6
LIME1-205ENST00000480139 CNTNAP3BQ96NU0 1288 aa18.83■□□□□ 0.6
LIME1-205ENST00000480139 CNTNAP3Q9BZ76 1288 aa18.83■□□□□ 0.6
LIME1-205ENST00000480139 IPPKQ9H8X2 491 aa18.83■□□□□ 0.6
LIME1-205ENST00000480139 LHX9Q9NQ69 397 aa18.83■□□□□ 0.6
LIME1-205ENST00000480139 STARD5Q9NSY2 213 aa18.83■□□□□ 0.6
LIME1-205ENST00000480139 CUTCQ9NTM9 273 aa18.83■□□□□ 0.6
LIME1-205ENST00000480139 TXLNGQ9NUQ3 528 aa18.83■□□□□ 0.6
LIME1-205ENST00000480139 PADI1Q9ULC6 663 aa18.83■□□□□ 0.6
LIME1-205ENST00000480139 RUVBL1Q9Y265 456 aaKnown RBP18.83■□□□□ 0.6
LIME1-205ENST00000480139 ANKRD11Q6UB99 2663 aaPredicted RBP18.82■□□□□ 0.6
LIME1-205ENST00000480139 TEX51A0A1B0GUA7 166 aa18.82■□□□□ 0.6
LIME1-205ENST00000480139 A0A1B0GX78 115 aa18.82■□□□□ 0.6
LIME1-205ENST00000480139 GOLGA6L10A6NI86 522 aa18.82■□□□□ 0.6
LIME1-205ENST00000480139 MEN1O00255 615 aa18.82■□□□□ 0.6
LIME1-205ENST00000480139 DSCR3O14972 297 aa18.82■□□□□ 0.6
LIME1-205ENST00000480139 P2RX6O15547 441 aa18.82■□□□□ 0.6
LIME1-205ENST00000480139 TYROBPO43914 113 aa18.82■□□□□ 0.6
LIME1-205ENST00000480139 KLK3P07288 261 aaPredicted RBP18.82■□□□□ 0.6
LIME1-205ENST00000480139 CD22P20273 847 aa18.82■□□□□ 0.6
LIME1-205ENST00000480139 NAA20P61599 178 aa18.82■□□□□ 0.6
LIME1-205ENST00000480139 MUM1Q2TAK8 710 aa18.82■□□□□ 0.6
LIME1-205ENST00000480139 HKDC1Q2TB90 917 aa18.82■□□□□ 0.6
LIME1-205ENST00000480139 ZNF678Q5SXM1 525 aa18.82■□□□□ 0.6
LIME1-205ENST00000480139 LIPJQ5W064 366 aa18.82■□□□□ 0.6
LIME1-205ENST00000480139 EXOC3L1Q86VI1 746 aa18.82■□□□□ 0.6
LIME1-205ENST00000480139 ANKRD53Q8N9V6 530 aa18.82■□□□□ 0.6
LIME1-205ENST00000480139 TRPV3Q8NET8 790 aa18.82■□□□□ 0.6
LIME1-205ENST00000480139 SLC13A3Q8WWT9 602 aa18.82■□□□□ 0.6
LIME1-205ENST00000480139 UBE2E3Q969T4 207 aa18.82■□□□□ 0.6
LIME1-205ENST00000480139 MVB12AQ96EY5 273 aa18.82■□□□□ 0.6
LIME1-205ENST00000480139 C10orf90Q96M02 699 aa18.82■□□□□ 0.6
LIME1-205ENST00000480139 GBP5Q96PP8 586 aa18.82■□□□□ 0.6
LIME1-205ENST00000480139 TMEM237Q96Q45 408 aa18.82■□□□□ 0.6
LIME1-205ENST00000480139 CENPHQ9H3R5 247 aa18.82■□□□□ 0.6
LIME1-205ENST00000480139 VIPAS39Q9H9C1 493 aa18.82■□□□□ 0.6
LIME1-205ENST00000480139 TPRP12270 2363 aaKnown RBP18.82■□□□□ 0.6
LIME1-205ENST00000480139 FER1L5A0AVI2 2057 aa18.81■□□□□ 0.6
LIME1-205ENST00000480139 ONECUT2O95948 504 aa18.81■□□□□ 0.6
LIME1-205ENST00000480139 CPA3P15088 417 aa18.81■□□□□ 0.6
LIME1-205ENST00000480139 HNF4AP41235 474 aa18.81■□□□□ 0.6
LIME1-205ENST00000480139 DNAJB13P59910 316 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms