RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 JAM2P57087 298 aa11.04□□□□□ -0.64
USP11-208ENST00000480104 SNRPNP63162 240 aaKnown RBP11.04□□□□□ -0.64
USP11-208ENST00000480104 KRT81Q14533 505 aa11.04□□□□□ -0.64
USP11-208ENST00000480104 ABRAXAS2Q15018 415 aa11.04□□□□□ -0.64
USP11-208ENST00000480104 BRD3Q15059 726 aa11.04□□□□□ -0.64
USP11-208ENST00000480104 SLC14A2Q15849 920 aa11.04□□□□□ -0.64
USP11-208ENST00000480104 SIRPB2Q5JXA9 342 aa11.04□□□□□ -0.64
USP11-208ENST00000480104 FBXO42Q6P3S6 717 aa11.04□□□□□ -0.64
USP11-208ENST00000480104 LRRC8BQ6P9F7 803 aa11.04□□□□□ -0.64
USP11-208ENST00000480104 PLEKHM3Q6ZWE6 761 aa11.04□□□□□ -0.64
USP11-208ENST00000480104 LIX1Q8N485 282 aa11.04□□□□□ -0.64
USP11-208ENST00000480104 FAM109AQ8N4B1 249 aa11.04□□□□□ -0.64
USP11-208ENST00000480104 TMEM251Q8N6I4 163 aa11.04□□□□□ -0.64
USP11-208ENST00000480104 TMEM171Q8WVE6 324 aa11.04□□□□□ -0.64
USP11-208ENST00000480104 PIK3IP1Q96FE7 263 aa11.04□□□□□ -0.64
USP11-208ENST00000480104 KCNK17Q96T54 332 aa11.04□□□□□ -0.64
USP11-208ENST00000480104 EPB41L4BQ9H329 900 aa11.04□□□□□ -0.64
USP11-208ENST00000480104 CXorf56Q9H5V9 222 aa11.04□□□□□ -0.64
USP11-208ENST00000480104 TIMMDC1Q9NPL8 285 aa11.04□□□□□ -0.64
USP11-208ENST00000480104 GALNT8Q9NY28 637 aa11.04□□□□□ -0.64
USP11-208ENST00000480104 FKBPLQ9UIM3 349 aa11.04□□□□□ -0.64
USP11-208ENST00000480104 KLK4Q9Y5K2 254 aa11.04□□□□□ -0.64
USP11-208ENST00000480104 ARHGAP21Q5T5U3 1957 aa11.04□□□□□ -0.64
USP11-208ENST00000480104 KIAA1549Q9HCM3 1950 aa11.04□□□□□ -0.64
USP11-208ENST00000480104 FREM1Q5H8C1 2179 aa11.03□□□□□ -0.64
USP11-208ENST00000480104 G3V3Y1 287 aa11.03□□□□□ -0.64
USP11-208ENST00000480104 SUSD5O60279 629 aa11.03□□□□□ -0.64
USP11-208ENST00000480104 SRD5A1P18405 259 aa11.03□□□□□ -0.64
USP11-208ENST00000480104 ACSF3Q4G176 576 aaPredicted RBP11.03□□□□□ -0.64
USP11-208ENST00000480104 LIPNQ5VXI9 398 aa11.03□□□□□ -0.64
USP11-208ENST00000480104 OTOAQ7RTW8 1153 aa11.03□□□□□ -0.64
USP11-208ENST00000480104 FBXW8Q8N3Y1 598 aa11.03□□□□□ -0.64
USP11-208ENST00000480104 SLC25A41Q8N5S1 370 aa11.03□□□□□ -0.64
USP11-208ENST00000480104 CLDN19Q8N6F1 224 aa11.03□□□□□ -0.64
USP11-208ENST00000480104 PSD4Q8NDX1 1056 aa11.03□□□□□ -0.64
USP11-208ENST00000480104 OR2L8Q8NGY9 312 aa11.03□□□□□ -0.64
USP11-208ENST00000480104 SLC22A8Q8TCC7 542 aa11.03□□□□□ -0.64
USP11-208ENST00000480104 TSLPQ969D9 159 aa11.03□□□□□ -0.64
USP11-208ENST00000480104 HS3ST6Q96QI5 342 aa11.03□□□□□ -0.64
USP11-208ENST00000480104 FICDQ9BVA6 458 aa11.03□□□□□ -0.64
USP11-208ENST00000480104 RBM24Q9BX46 236 aaKnown RBP11.03□□□□□ -0.64
USP11-208ENST00000480104 SHARPINQ9H0F6 387 aa11.03□□□□□ -0.64
USP11-208ENST00000480104 FAM96AQ9H5X1 160 aa11.03□□□□□ -0.64
USP11-208ENST00000480104 LDAHQ9H6V9 325 aa11.03□□□□□ -0.64
USP11-208ENST00000480104 EXO5Q9H790 373 aa11.03□□□□□ -0.64
USP11-208ENST00000480104 L2HGDHQ9H9P8 463 aa11.03□□□□□ -0.64
USP11-208ENST00000480104 TMEM160Q9NX00 188 aa11.03□□□□□ -0.64
USP11-208ENST00000480104 HACD3Q9P035 362 aa11.03□□□□□ -0.64
USP11-208ENST00000480104 JKAMPQ9P055 326 aa11.03□□□□□ -0.64
USP11-208ENST00000480104 ARL5AQ9Y689 179 aa11.03□□□□□ -0.64
USP11-208ENST00000480104 NFS1Q9Y697 457 aa11.03□□□□□ -0.64
USP11-208ENST00000480104 CMYA5Q8N3K9 4069 aa11.03□□□□□ -0.64
USP11-208ENST00000480104 RAI1Q7Z5J4 1906 aaPredicted RBP11.03□□□□□ -0.64
USP11-208ENST00000480104 A0A0U1RQJ8 604 aa11.02□□□□□ -0.65
USP11-208ENST00000480104 ATP6AP2A0A1C7CYW4 349 aa11.02□□□□□ -0.65
USP11-208ENST00000480104 PES1O00541 588 aaKnown RBP11.02□□□□□ -0.65
USP11-208ENST00000480104 LIN7AO14910 233 aaPredicted RBP11.02□□□□□ -0.65
USP11-208ENST00000480104 CTIFO43310 598 aaKnown RBP11.02□□□□□ -0.65
USP11-208ENST00000480104 GPRIN2O60269 458 aa11.02□□□□□ -0.65
USP11-208ENST00000480104 ATP6AP2O75787 350 aa11.02□□□□□ -0.65
USP11-208ENST00000480104 FKBP9O95302 570 aa11.02□□□□□ -0.65
USP11-208ENST00000480104 PRKCSHP14314 528 aaPredicted RBP11.02□□□□□ -0.65
USP11-208ENST00000480104 XCR1P46094 333 aa11.02□□□□□ -0.65
USP11-208ENST00000480104 POLR2FP61218 127 aaKnown RBP11.02□□□□□ -0.65
USP11-208ENST00000480104 SLC10A2Q12908 348 aaPredicted RBP11.02□□□□□ -0.65
USP11-208ENST00000480104 PTK6Q13882 451 aa11.02□□□□□ -0.65
USP11-208ENST00000480104 NSDHLQ15738 373 aa11.02□□□□□ -0.65
USP11-208ENST00000480104 TYSND1Q2T9J0 566 aa11.02□□□□□ -0.65
USP11-208ENST00000480104 NDUFAF5Q5TEU4 345 aa11.02□□□□□ -0.65
USP11-208ENST00000480104 GARNL3Q5VVW2 1013 aa11.02□□□□□ -0.65
USP11-208ENST00000480104 KIAA0408Q6ZU52 694 aa11.02□□□□□ -0.65
USP11-208ENST00000480104 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.02□□□□□ -0.65
USP11-208ENST00000480104 TMEM156Q8N614 296 aa11.02□□□□□ -0.65
USP11-208ENST00000480104 OR9A4Q8NGU2 314 aa11.02□□□□□ -0.65
USP11-208ENST00000480104 ULK4Q96C45 1275 aa11.02□□□□□ -0.65
USP11-208ENST00000480104 WDR83Q9BRX9 315 aaKnown RBP11.02□□□□□ -0.65
USP11-208ENST00000480104 RAB11FIP5Q9BXF6 653 aa11.02□□□□□ -0.65
USP11-208ENST00000480104 KCMF1Q9P0J7 381 aa11.02□□□□□ -0.65
USP11-208ENST00000480104 HCN3Q9P1Z3 774 aa11.02□□□□□ -0.65
USP11-208ENST00000480104 HOOK1Q9UJC3 728 aaKnown RBP11.02□□□□□ -0.65
USP11-208ENST00000480104 PCDHA3Q9Y5H8 950 aa11.02□□□□□ -0.65
USP11-208ENST00000480104 IGLV3-16A0A075B6K0 115 aa11.01□□□□□ -0.65
USP11-208ENST00000480104 LOC285095A0A1B0GVY8 99 aa11.01□□□□□ -0.65
USP11-208ENST00000480104 FEZF1A0PJY2 475 aa11.01□□□□□ -0.65
USP11-208ENST00000480104 OR2A25A4D2G3 310 aa11.01□□□□□ -0.65
USP11-208ENST00000480104 AGAP14A8MT82 685 aa11.01□□□□□ -0.65
USP11-208ENST00000480104 EPHB6O15197 1021 aa11.01□□□□□ -0.65
USP11-208ENST00000480104 IL2RAP01589 272 aa11.01□□□□□ -0.65
USP11-208ENST00000480104 TIMP3P35625 211 aa11.01□□□□□ -0.65
USP11-208ENST00000480104 WNT3AP56704 352 aa11.01□□□□□ -0.65
USP11-208ENST00000480104 OR4D2P58180 307 aa11.01□□□□□ -0.65
USP11-208ENST00000480104 XIAPP98170 497 aa11.01□□□□□ -0.65
USP11-208ENST00000480104 PPIDQ08752 370 aaKnown RBP11.01□□□□□ -0.65
USP11-208ENST00000480104 GRB7Q14451 532 aa11.01□□□□□ -0.65
USP11-208ENST00000480104 SIX1Q15475 284 aaPredicted RBP11.01□□□□□ -0.65
USP11-208ENST00000480104 IL17RELQ6ZVW7 336 aa11.01□□□□□ -0.65
USP11-208ENST00000480104 MICALCLQ6ZW33 695 aa11.01□□□□□ -0.65
USP11-208ENST00000480104 ARMC10Q8N2F6 343 aa11.01□□□□□ -0.65
USP11-208ENST00000480104 ARIH2OSQ8N7S6 290 aa11.01□□□□□ -0.65
USP11-208ENST00000480104 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms