RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 TYMPP19971 482 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 GLRA2P23416 452 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 ACP1P24666 158 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 ARRB1P49407 418 aaPredicted RBP4.43□□□□□ -1.7
VPS50-214ENST00000477935 CLCNKAP51800 687 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 HNRNPH2P55795 449 aaKnown RBP4.43□□□□□ -1.7
VPS50-214ENST00000477935 DMP1Q13316 513 aaPredicted RBP4.43□□□□□ -1.7
VPS50-214ENST00000477935 DRAP1Q14919 205 aaPredicted RBP4.43□□□□□ -1.7
VPS50-214ENST00000477935 C6orf141Q5SZD1 244 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 KCTD18Q6PI47 426 aaPredicted RBP4.43□□□□□ -1.7
VPS50-214ENST00000477935 CWC27Q6UX04 472 aaKnown RBP4.43□□□□□ -1.7
VPS50-214ENST00000477935 SFR1Q86XK3 245 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 SLC34A3Q8N130 599 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 ARL14Q8N4G2 192 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 OR2AK2Q8NG84 335 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 SPPL2BQ8TCT7 592 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 MAGEC3Q8TD91 643 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 SAP25Q8TEE9 199 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 SSC4DQ8WTU2 575 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 SEPT5Q99719 369 aaPredicted RBP4.43□□□□□ -1.7
VPS50-214ENST00000477935 GABRG3Q99928 467 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 CCDC94Q9BW85 323 aaPredicted RBP4.43□□□□□ -1.7
VPS50-214ENST00000477935 CXCL16Q9H2A7 254 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 EVA1AQ9H8M9 152 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 UBTD1Q9HAC8 227 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 ASCL3Q9NQ33 180 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 DIAPH3Q9NSV4 1193 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 TAS2R10Q9NYW0 307 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 DEC1Q9P2X7 70 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 HAO1Q9UJM8 370 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 TTC7AQ9ULT0 858 aaPredicted RBP4.43□□□□□ -1.7
VPS50-214ENST00000477935 STK36Q9NRP7 1315 aa4.43□□□□□ -1.7
VPS50-214ENST00000477935 PTPRDP23468 1912 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 A0A087WYN8 130 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 ANTXRLA6NF34 631 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 LRRIQ4A6NIV6 560 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 E7EWF7 191 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 VILLO15195 856 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 OR4Q2P0C623 313 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 HAPLN1P10915 354 aaPredicted RBP4.42□□□□□ -1.7
VPS50-214ENST00000477935 AMD1P17707 334 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 ATF6P18850 670 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 DGKAP23743 735 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 RRM1P23921 792 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 MT3P25713 68 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 CD27P26842 260 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 BDKRB2P30411 391 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 NMT1P30419 496 aaKnown RBP4.42□□□□□ -1.7
VPS50-214ENST00000477935 HSPA4P34932 840 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 TNFSF9P41273 254 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 DUSP3P51452 185 aaPredicted RBP4.42□□□□□ -1.7
VPS50-214ENST00000477935 CLDN6P56747 220 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 C21orf59P57076 290 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 RPL10AP62906 217 aaKnown RBP4.42□□□□□ -1.7
VPS50-214ENST00000477935 PPP2R5CQ13362 524 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 ZSCAN23Q3MJ62 389 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 INTS11Q5TA45 600 aaKnown RBP4.42□□□□□ -1.7
VPS50-214ENST00000477935 MOXD1Q6UVY6 613 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 KDM7AQ6ZMT4 941 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 PQLC2Q6ZP29 291 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 C9orf139Q6ZV77 190 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 THEM5Q8N1Q8 247 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 MUC20Q8N307 709 aaPredicted RBP4.42□□□□□ -1.7
VPS50-214ENST00000477935 EID2Q8N6I1 236 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 NUP210Q8TEM1 1887 aaPredicted RBP4.42□□□□□ -1.7
VPS50-214ENST00000477935 OTUB2Q96DC9 234 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 CYP2S1Q96SQ9 504 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 RPF1Q9H9Y2 349 aaKnown RBP4.42□□□□□ -1.7
VPS50-214ENST00000477935 LRRC4Q9HBW1 653 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 TM9SF3Q9HD45 589 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 XPNPEP1Q9NQW7 623 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 ANKEF1Q9NU02 776 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 GCNT4Q9P109 453 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 MKLN1Q9UL63 735 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 KIF26AQ9ULI4 1882 aaPredicted RBP4.42□□□□□ -1.7
VPS50-214ENST00000477935 TMEM98Q9Y2Y6 226 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 CAPN7Q9Y6W3 813 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 CRYBG3Q68DQ2 2970 aa4.42□□□□□ -1.7
VPS50-214ENST00000477935 HELZP42694 1942 aaKnown RBP4.42□□□□□ -1.7
VPS50-214ENST00000477935 NIPBLQ6KC79 2804 aaeCLIP4.41□□□□□ -1.7
VPS50-214ENST00000477935 HIVEP1P15822 2718 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 GOLGA6L9A6NEM1 432 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 BMPR1BO00238 502 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 TGFB1I1O43294 461 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 LYPLA2O95372 231 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 IGKV3-20P01619 116 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 GP1BAP07359 652 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 ACADMP11310 421 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 CYP3A5P20815 502 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 S1PR1P21453 382 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 MCM3P25205 808 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 DCTP40126 519 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 RXRGP48443 463 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 TPMTP51580 245 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 CASP6P55212 293 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 RELQ04864 619 aaPredicted RBP4.41□□□□□ -1.7
VPS50-214ENST00000477935 SLC20A2Q08357 652 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 ATF7IP2Q5U623 682 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 CDC73Q6P1J9 531 aa4.41□□□□□ -1.7
VPS50-214ENST00000477935 DSTYKQ6XUX3 929 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms