RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 TUBB4BP68371 445 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 IFI35P80217 286 aaPredicted RBP4.42□□□□□ -1.7
CKS1B-207ENST00000477676 HSD11B2P80365 405 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 DMPKQ09013 629 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 TMEM115Q12893 351 aaPredicted RBP4.42□□□□□ -1.7
CKS1B-207ENST00000477676 TUBB2AQ13885 445 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 PTPRCAPQ14761 206 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 PTCHD3Q3KNS1 767 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 SPDYE7PQ495Y7 208 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 ZNF658BQ4V348 819 aaPredicted RBP4.42□□□□□ -1.7
CKS1B-207ENST00000477676 DNTTIP2Q5QJE6 756 aaKnown RBP4.42□□□□□ -1.7
CKS1B-207ENST00000477676 CCDC183Q5T5S1 534 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 METRNLQ641Q3 311 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 NPNTQ6UXI9 565 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 DAAM2Q86T65 1068 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 TRAPPC5Q8IUR0 188 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 LRRC49Q8IUZ0 686 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 RHOT1Q8IXI2 618 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 SYTL1Q8IYJ3 562 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 NDUFAF2Q8N183 169 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 BBS5Q8N3I7 341 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 PLD5Q8N7P1 536 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 AVL9Q8NBF6 648 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 NSMCE1Q8WV22 266 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 RAPGEF5Q92565 580 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 HDAC11Q96DB2 347 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 CXorf40BQ96DE9 158 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 IMP4Q96G21 291 aaKnown RBP4.42□□□□□ -1.7
CKS1B-207ENST00000477676 RMDN2Q96LZ7 410 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 LRFN5Q96NI6 719 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 NAP1L5Q96NT1 182 aaPredicted RBP4.42□□□□□ -1.7
CKS1B-207ENST00000477676 VPS35Q96QK1 796 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 MESP1Q9BRJ9 268 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 ZSCAN5AQ9BUG6 496 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 TUBB2BQ9BVA1 445 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 NLNQ9BYT8 704 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 THAP2Q9H0W7 228 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 MAGEE1Q9HCI5 957 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 PDE7BQ9NP56 450 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 IL26Q9NPH9 171 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 SLAMF7Q9NQ25 335 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 OXSMQ9NWU1 459 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 HRASLS2Q9NWW9 162 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 GPR83Q9NYM4 423 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 AMACRQ9UHK6 382 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 DNPEPQ9ULA0 475 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 MYO6Q9UM54 1294 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 NENFQ9UMX5 172 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 NSD1Q96L73 2696 aaPredicted RBP4.42□□□□□ -1.7
CKS1B-207ENST00000477676 MPDZO75970 2070 aa4.42□□□□□ -1.7
CKS1B-207ENST00000477676 ABCA2Q9BZC7 2435 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 A0A087X0T9 212 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 ARHGAP10A1A4S6 786 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 CCDC78A2IDD5 438 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 OR6C74A6NCV1 312 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 TMEM200CA6NKL6 621 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 OR2AG2A6NM03 316 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 TMEM150CB9EJG8 249 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 BTN3A3O00478 584 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 LRRTM2O43300 516 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 BUD23O43709 281 aaKnown RBP4.41□□□□□ -1.7
CKS1B-207ENST00000477676 ZG16O60844 167 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 ALOX12BO75342 701 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 WISP2O76076 250 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 ZBTB11O95625 1053 aaPredicted RBP4.41□□□□□ -1.7
CKS1B-207ENST00000477676 UMODP07911 640 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 FREM3P0C091 2139 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 CLEC2LP0C7M8 214 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 FAM228BP0C875 321 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 CBSLP0DN79 551 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 MTHFD1P11586 935 aaKnown RBP4.41□□□□□ -1.7
CKS1B-207ENST00000477676 PVRP15151 417 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 POLR2CP19387 275 aaPredicted RBP4.41□□□□□ -1.7
CKS1B-207ENST00000477676 ITGAXP20702 1163 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 NR4A1P22736 598 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 PBLDP30039 288 aaPredicted RBP4.41□□□□□ -1.7
CKS1B-207ENST00000477676 APOBEC3AP31941 199 aaPredicted RBP4.41□□□□□ -1.7
CKS1B-207ENST00000477676 CBSP35520 551 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 GJC1P36383 396 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 GABRA4P48169 554 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 LMAN1P49257 510 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 MYL5Q02045 173 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 ACY1Q03154 408 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 CDK18Q07002 472 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 CD69Q07108 199 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 PPIDQ08752 370 aaKnown RBP4.41□□□□□ -1.7
CKS1B-207ENST00000477676 PIGHQ14442 188 aaPredicted RBP4.41□□□□□ -1.7
CKS1B-207ENST00000477676 KRT81Q14533 505 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 NCF4Q15080 339 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 LLGL1Q15334 1064 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 ZIC1Q15915 447 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 ASIC2Q16515 512 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 FAM214AQ32MH5 1076 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 ZRANB3Q5FWF4 1079 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 GPRC6AQ5T6X5 926 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 VWA5B1Q5TIE3 1220 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 ABHD17BQ5VST6 288 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 PDPK2PQ6A1A2 396 aa4.41□□□□□ -1.7
CKS1B-207ENST00000477676 SP5Q6BEB4 398 aaPredicted RBP4.41□□□□□ -1.7
CKS1B-207ENST00000477676 DRICH1Q6PGQ1 229 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms