RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 RAB41Q5JT25 222 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 FAM205BPQ63HN1 556 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 KRTAP5-4Q6L8H1 288 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 FAM53AQ6NSI3 398 aaPredicted RBP3.73□□□□□ -1.81
UBR3-209ENST00000477461 SASS6Q6UVJ0 657 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 STXBP4Q6ZWJ1 553 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 TRPT1Q86TN4 253 aaKnown RBP3.73□□□□□ -1.81
UBR3-209ENST00000477461 METTL13Q8N6R0 699 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 MAPK1IP1LQ8NDC0 245 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 U2AF1L4Q8WU68 220 aaKnown RBP3.73□□□□□ -1.81
UBR3-209ENST00000477461 SLC44A1Q8WWI5 657 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 TCP11Q8WWU5 503 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 KIFAP3Q92845 792 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 FAM120BQ96EK7 910 aaKnown RBP3.73□□□□□ -1.81
UBR3-209ENST00000477461 ELMOD3Q96FG2 381 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 PAGE5Q96GU1 130 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 LRR1Q96L50 414 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 IFT74Q96LB3 600 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 NUDCD1Q96RS6 583 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 TRIM9Q9C026 710 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 BLZF1Q9H2G9 400 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 PLK3Q9H4B4 646 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 PANK4Q9NVE7 773 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 INTS10Q9NVR2 710 aaKnown RBP3.73□□□□□ -1.81
UBR3-209ENST00000477461 WRAP73Q9P2S5 460 aaPredicted RBP3.73□□□□□ -1.81
UBR3-209ENST00000477461 POLG2Q9UHN1 485 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 ODF2LQ9ULJ1 636 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 R3HDM2Q9Y2K5 976 aaKnown RBP3.73□□□□□ -1.81
UBR3-209ENST00000477461 C2CD2Q9Y426 696 aa3.73□□□□□ -1.81
UBR3-209ENST00000477461 SRCAPQ6ZRS2 3230 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 PVALEFA0A1B0GWK0 134 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 SYCE3A1L190 88 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 TMEM150BA6NC51 233 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 TMEM8BA6NDV4 472 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 SERINC4A6NH21 518 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 LRRIQ4A6NIV6 560 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 CCDC169A6NNP5 214 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 ANKRD66B4E2M5 251 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 H0YCG3 227 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 M0QZ92 97 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 HAS3O00219 553 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 NR5A2O00482 541 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 AP3D1O14617 1153 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 BUD23O43709 281 aaKnown RBP3.72□□□□□ -1.81
UBR3-209ENST00000477461 PRKNO60260 465 aaPredicted RBP3.72□□□□□ -1.81
UBR3-209ENST00000477461 STBD1O95210 358 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 RB1P06400 928 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 PRSS56P0CW18 603 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 CCDC192P0DO97 292 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 SELLP14151 372 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 ALOX12P18054 663 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 ANXA7P20073 488 aaKnown RBP3.72□□□□□ -1.81
UBR3-209ENST00000477461 CASP1P29466 404 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 PLIN5Q00G26 463 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 CREB5Q02930 508 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 RUNX1T1Q06455 604 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 SPOCK1Q08629 439 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 EPS8Q12929 822 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 GAGE2BQ13066 116 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 PRKG2Q13237 762 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 ALCAMQ13740 583 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 GIT2Q14161 759 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 TFDP1Q14186 410 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 MXD4Q14582 209 aaPredicted RBP3.72□□□□□ -1.81
UBR3-209ENST00000477461 IRF3Q14653 427 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 TMEM187Q14656 261 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 STX1AQ16623 288 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 PTGISQ16647 500 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 GAGE2EQ4V326 116 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 HERC4Q5GLZ8 1057 aaPredicted RBP3.72□□□□□ -1.81
UBR3-209ENST00000477461 ITPRIPL1Q6GPH6 555 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 KIAA0930Q6ICG6 404 aaPredicted RBP3.72□□□□□ -1.81
UBR3-209ENST00000477461 GAGE2AQ6NT46 116 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 RBMS3Q6XE24 437 aaKnown RBP3.72□□□□□ -1.81
UBR3-209ENST00000477461 PLEKHM3Q6ZWE6 761 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 C1orf186Q6ZWK4 172 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 ANO5Q75V66 913 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 ARID3BQ8IVW6 561 aaPredicted RBP3.72□□□□□ -1.81
UBR3-209ENST00000477461 ZBTB8OSQ8IWT0 167 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 PM20D2Q8IYS1 436 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 EMC1Q8N766 993 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 TRIML1Q8N9V2 468 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 C1orf131Q8NDD1 294 aaKnown RBP3.72□□□□□ -1.81
UBR3-209ENST00000477461 HCAR2Q8TDS4 363 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 SCRN2Q96FV2 425 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 GSDMAQ96QA5 445 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 FAM49AQ9H0Q0 323 aaPredicted RBP3.72□□□□□ -1.81
UBR3-209ENST00000477461 POLR3FQ9H1D9 316 aaPredicted RBP3.72□□□□□ -1.81
UBR3-209ENST00000477461 LRMDAQ9H2I8 198 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 C11orf49Q9H6J7 331 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 PARVGQ9HBI0 331 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 TBC1D7Q9P0N9 293 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 RCC2Q9P258 522 aaKnown RBP3.72□□□□□ -1.81
UBR3-209ENST00000477461 MARCH4Q9P2E8 410 aaPredicted RBP3.72□□□□□ -1.81
UBR3-209ENST00000477461 LARSQ9P2J5 1176 aaKnown RBP3.72□□□□□ -1.81
UBR3-209ENST00000477461 SUCLA2Q9P2R7 463 aaPredicted RBP3.72□□□□□ -1.81
UBR3-209ENST00000477461 GAGE2DQ9UEU5 116 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 TUBE1Q9UJT0 475 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 JRKLQ9Y4A0 524 aa3.72□□□□□ -1.81
UBR3-209ENST00000477461 KIAA0100Q14667 2235 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms