RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 CAVIN2O95810 425 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 GNA14O95837 355 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 MOCS2O96007 188 aaPredicted RBP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 TRBC1P01850 177 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 ITGB3P05106 788 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 CRYGCP07315 174 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 MYZAPP0CAP1 466 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 SPATA31C1P0DKV0 1188 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 PRKAR1AP10644 381 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 DBTP11182 482 aaKnown RBP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 PRPS2P11908 318 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 APEHP13798 732 aaKnown RBP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 INSRRP14616 1297 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 ZNF44P15621 663 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 LBPP18428 481 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 MX1P20591 662 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 FBLN1P23142 703 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 YWHAQP27348 245 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 PIK3R1P27986 724 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 AXLP30530 894 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 FCGR2BP31994 310 aaPredicted RBP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 CSTF2P33240 577 aaKnown RBP eCLIP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 MAGEB1P43366 347 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 MMP13P45452 471 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 SLC9A3P48764 834 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 CD97P48960 835 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 SLC11A1P49279 550 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 ALDH7A1P49419 539 aaKnown RBP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 CLDN2P57739 230 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 UBE2IP63279 158 aaKnown RBP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 HSD11B2P80365 405 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 SORDQ00796 357 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 GRIK2Q13002 908 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 NAE1Q13564 534 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 RIN1Q13671 783 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 LAMB3Q13751 1172 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 MVPQ14764 893 aaKnown RBP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 RTP5Q14D33 572 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 PRKD1Q15139 912 aaPredicted RBP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 AANATQ16613 207 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 ANKRD55Q3KP44 614 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 PLEKHN1Q494U1 663 aaPredicted RBP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 PLK5Q496M5 336 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 FAM76BQ5HYJ3 339 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 Q5PR19 223 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 PIP5KL1Q5T9C9 394 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 TEDDM1Q5T9Z0 273 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 PRAMEF5Q5TYX0 476 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 IL23RQ5VWK5 629 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 PRAMEF6Q5VXH4 476 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 PRAMEF7Q5VXH5 474 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 OR7E24Q6IFN5 339 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 PLEKHA7Q6IQ23 1121 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 CYB5D1Q6P9G0 228 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 ZNF474Q6S9Z5 364 aaPredicted RBP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 CD164L2Q6UWJ8 174 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 LCTLQ6UWM7 567 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 FAM159AQ6UWV7 190 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 KYAT3Q6YP21 454 aaKnown RBP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 RNF207Q6ZRF8 634 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 TPRG1Q6ZUI0 275 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 SLC16A9Q7RTY1 509 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 GRASPQ7Z6J2 395 aaPredicted RBP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 LUZP2Q86TE4 346 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 SERINC5Q86VE9 423 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 CDR2LQ86X02 465 aaPredicted RBP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 XYLT1Q86Y38 959 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 LAX1Q8IWV1 398 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 CCDC65Q8IXS2 484 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 EFCAB13Q8IY85 973 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 UBQLNLQ8IYU4 475 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 GCNT2Q8N0V5 402 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 CRYBG2Q8N1P7 616 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 C12orf76Q8N812 135 aaPredicted RBP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 CEP112Q8N8E3 955 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 FAM47BQ8NA70 645 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 SIDT2Q8NBJ9 832 aaKnown RBP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 TP53I13Q8NBR0 393 aaPredicted RBP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 KCNH5Q8NCM2 988 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 KIAA0895Q8NCT3 520 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 BPIFCQ8NFQ6 507 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 BEST2Q8NFU1 509 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 CMASQ8NFW8 434 aaPredicted RBP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 FAM81AQ8TBF8 368 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 OR1E3Q8WZA6 343 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 PIGKQ92643 395 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 AKAP1Q92667 903 aaKnown RBP eCLIP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 CDKL2Q92772 493 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 RFKQ969G6 155 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 FBXL8Q96CD0 374 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 C16orf58Q96GQ5 468 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 WDYHV1Q96HA8 205 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 VCPIP1Q96JH7 1222 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 DCAF5Q96JK2 942 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 C12orf66Q96MD2 445 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 TRNT1Q96Q11 434 aaKnown RBP2.77□□□□□ -1.97
HMGN4-202ENST00000477243 TAAR6Q96RI8 345 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 GPHA2Q96T91 129 aa2.77□□□□□ -1.97
HMGN4-202ENST00000477243 DDOQ99489 341 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms