RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 DSG2Q14126 1118 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 OR4D1Q15615 310 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 FAM83EQ2M2I3 478 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 CATSPEREQ5SY80 951 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 NXPE4Q6UWF7 544 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 COX15Q7KZN9 410 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 TAOK1Q7L7X3 1001 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 ASPGQ86U10 573 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 RHEBL1Q8TAI7 183 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 AIF1LQ9BQI0 150 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 ING2Q9H160 280 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 IGSF5Q9NSI5 407 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 CD274Q9NZQ7 290 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 ZNF180Q9UJW8 692 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 PTBP2Q9UKA9 531 aaKnown RBP12.78□□□□□ -0.36
ACTN4-205ENST00000477174 RNF112Q9ULX5 631 aa12.78□□□□□ -0.36
ACTN4-205ENST00000477174 COL6A6A6NMZ7 2263 aa12.77□□□□□ -0.36
ACTN4-205ENST00000477174 IGLV3-12A0A075B6K2 115 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 A0A096LPK6 155 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 NCF1BA6NI72 391 aaPredicted RBP12.77□□□□□ -0.37
ACTN4-205ENST00000477174 NCF1CA8MVU1 366 aaPredicted RBP12.77□□□□□ -0.37
ACTN4-205ENST00000477174 H0YIG0 161 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 PEX12O00623 359 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 TAPBPO15533 448 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 P2RX6O15547 441 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 FOXS1O43638 330 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 OR1F1O43749 312 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 H2AFYO75367 372 aaKnown RBP12.77□□□□□ -0.37
ACTN4-205ENST00000477174 STK16O75716 305 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 WDR47O94967 919 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 KLHL2O95198 593 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 ALDOAP04075 364 aaKnown RBP12.77□□□□□ -0.37
ACTN4-205ENST00000477174 S100BP04271 92 aaPredicted RBP12.77□□□□□ -0.37
ACTN4-205ENST00000477174 UMODP07911 640 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 ABHD2P08910 425 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 ATXN8OSP0DMR3 200 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 NCF1P14598 390 aaPredicted RBP12.77□□□□□ -0.37
ACTN4-205ENST00000477174 TFEBP19484 476 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 FBLP22087 321 aaKnown RBP12.77□□□□□ -0.37
ACTN4-205ENST00000477174 MMP11P24347 488 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 CXCR2P25025 360 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 OTX2P32243 289 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 AHRP35869 848 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 GDF5P43026 501 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 AVPR1BP47901 424 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 SERPINB8P50452 374 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 DLG1Q12959 904 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 BMPR2Q13873 1038 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 ACAP2Q15057 778 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 UBAP2Q5T6F2 1119 aaKnown RBP12.77□□□□□ -0.37
ACTN4-205ENST00000477174 LGSNQ5TDP6 509 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 TMEM214Q6NUQ4 689 aaKnown RBP12.77□□□□□ -0.37
ACTN4-205ENST00000477174 MRGPREQ86SM8 312 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 CNPY4Q8N129 248 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 DTWD1Q8N5C7 304 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 PDPRQ8NCN5 879 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 NXNL1Q96CM4 212 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 MMABQ96EY8 250 aaPredicted RBP12.77□□□□□ -0.37
ACTN4-205ENST00000477174 ABHD17AQ96GS6 310 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 FER1L6-AS2Q96M78 137 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 TSNARE1Q96NA8 513 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 SPSB2Q99619 263 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 TGIF2Q9GZN2 237 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 PITHD1Q9GZP4 211 aaPredicted RBP12.77□□□□□ -0.37
ACTN4-205ENST00000477174 ALG9Q9H6U8 611 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 ACSS2Q9NR19 701 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 SNX15Q9NRS6 342 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 WWOXQ9NZC7 414 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 GPRC5BQ9NZH0 403 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 CTSFQ9UBX1 484 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 ZFP69BQ9UJL9 534 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 MAP4K5Q9Y4K4 846 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 SLC22A7Q9Y694 548 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 ANKRD12Q6UB98 2062 aa12.77□□□□□ -0.37
ACTN4-205ENST00000477174 A0A0A6YYC8 382 aaPredicted RBP12.76□□□□□ -0.37
ACTN4-205ENST00000477174 ARGFXA6NJG6 315 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 SYCE1LA8MT33 242 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 B8ZZF3 427 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 POC1B-GALNT4F8VUJ3 575 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 I3L1I5 382 aaPredicted RBP12.76□□□□□ -0.37
ACTN4-205ENST00000477174 KERAO60938 352 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 NSA2O95478 260 aaKnown RBP12.76□□□□□ -0.37
ACTN4-205ENST00000477174 ZGLP1P0C6A0 271 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 SLC35G6P0C7Q6 338 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 C1GALT1C1LP0DN25 315 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 SCTRP47872 440 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 MEF2AQ02078 507 aaPredicted RBP12.76□□□□□ -0.37
ACTN4-205ENST00000477174 CDC16Q13042 620 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 C18orf21Q32NC0 220 aaPredicted RBP12.76□□□□□ -0.37
ACTN4-205ENST00000477174 TCTN3Q6NUS6 607 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 KLC3Q6P597 504 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 SLCO4C1Q6ZQN7 724 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 CENPLQ8N0S6 344 aaPredicted RBP12.76□□□□□ -0.37
ACTN4-205ENST00000477174 METTL27Q8N6F8 245 aaPredicted RBP12.76□□□□□ -0.37
ACTN4-205ENST00000477174 LRRN4CLQ8ND94 238 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 TRPV3Q8NET8 790 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 C9orf43Q8TAL5 461 aaPredicted RBP12.76□□□□□ -0.37
ACTN4-205ENST00000477174 STT3BQ8TCJ2 826 aa12.76□□□□□ -0.37
ACTN4-205ENST00000477174 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.76□□□□□ -0.37
ACTN4-205ENST00000477174 ISL2Q96A47 359 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms