RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 PPARGP37231 505 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-213ENST00000476777 AVPR1BP47901 424 aa10.7□□□□□ -0.7
BRCA1-213ENST00000476777 RELAQ04206 551 aa10.7□□□□□ -0.7
BRCA1-213ENST00000476777 FOLH1Q04609 750 aa10.7□□□□□ -0.7
BRCA1-213ENST00000476777 FOXD4Q12950 439 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-213ENST00000476777 P3H1Q32P28 736 aa10.7□□□□□ -0.7
BRCA1-213ENST00000476777 FASTKD1Q53R41 847 aaKnown RBP10.7□□□□□ -0.7
BRCA1-213ENST00000476777 TSTD2Q5T7W7 516 aa10.7□□□□□ -0.7
BRCA1-213ENST00000476777 MFSD4BQ5TF39 518 aa10.7□□□□□ -0.7
BRCA1-213ENST00000476777 C11orf63Q6NUN7 778 aa10.7□□□□□ -0.7
BRCA1-213ENST00000476777 SUSD1Q6UWL2 747 aa10.7□□□□□ -0.7
BRCA1-213ENST00000476777 LINC00523Q86TU6 105 aa10.7□□□□□ -0.7
BRCA1-213ENST00000476777 CD163Q86VB7 1156 aa10.7□□□□□ -0.7
BRCA1-213ENST00000476777 LGI4Q8N135 537 aa10.7□□□□□ -0.7
BRCA1-213ENST00000476777 SLC5A8Q8N695 610 aa10.7□□□□□ -0.7
BRCA1-213ENST00000476777 OR9A4Q8NGU2 314 aa10.7□□□□□ -0.7
BRCA1-213ENST00000476777 OR6P1Q8NGX9 317 aa10.7□□□□□ -0.7
BRCA1-213ENST00000476777 SMPDL3AQ92484 453 aa10.7□□□□□ -0.7
BRCA1-213ENST00000476777 KCNJ16Q9NPI9 418 aa10.7□□□□□ -0.7
BRCA1-213ENST00000476777 RIMKLBQ9ULI2 386 aa10.7□□□□□ -0.7
BRCA1-213ENST00000476777 H0YIG0 161 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 PSMD3O43242 534 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 ZWINTO95229 277 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 MATN4O95460 622 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 NSA2O95478 260 aaKnown RBP10.69□□□□□ -0.7
BRCA1-213ENST00000476777 TPOP07202 933 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 EZRP15311 586 aaKnown RBP10.69□□□□□ -0.7
BRCA1-213ENST00000476777 CTNNA1P35221 906 aaKnown RBP10.69□□□□□ -0.7
BRCA1-213ENST00000476777 RPA3P35244 121 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-213ENST00000476777 XCR1P46094 333 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 AGTR2P50052 363 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 GDF10P55107 478 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 PRDX1Q06830 199 aaKnown RBP10.69□□□□□ -0.7
BRCA1-213ENST00000476777 CDH17Q12864 832 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 PTK6Q13882 451 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 TRIM14Q14142 442 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 NDUFA9Q16795 377 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.69□□□□□ -0.7
BRCA1-213ENST00000476777 ICE2Q659A1 982 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 PTRHD1Q6GMV3 140 aaKnown RBP10.69□□□□□ -0.7
BRCA1-213ENST00000476777 TMEM211Q6ICI0 200 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 AADACL2Q6P093 401 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 PAPD4Q6PIY7 484 aaKnown RBP10.69□□□□□ -0.7
BRCA1-213ENST00000476777 OTOAQ7RTW8 1153 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 PRSS41Q7RTY9 318 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 ZNF227Q86WZ6 799 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 CCDC71Q8IV32 467 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-213ENST00000476777 OR9A1PQ8NGU1 263 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 OR51Q1Q8NH59 317 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 MAGEC3Q8TD91 643 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 RND1Q92730 232 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 MRFAP1L1Q96HT8 127 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 FOPNLQ96NB1 174 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 PANX3Q96QZ0 392 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 P2RY12Q9H244 342 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 MARCH4Q9P2E8 410 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-213ENST00000476777 TAC3Q9UHF0 121 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 PCYOX1Q9UHG3 505 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 PCDHA3Q9Y5H8 950 aa10.69□□□□□ -0.7
BRCA1-213ENST00000476777 ARID1AO14497 2285 aa10.68□□□□□ -0.7
BRCA1-213ENST00000476777 ARHGEF33A8MVX0 844 aa10.68□□□□□ -0.7
BRCA1-213ENST00000476777 MYO1CO00159 1063 aa10.68□□□□□ -0.7
BRCA1-213ENST00000476777 CDK2AP1O14519 115 aa10.68□□□□□ -0.7
BRCA1-213ENST00000476777 HAT1O14929 419 aa10.68□□□□□ -0.7
BRCA1-213ENST00000476777 KPNA5O15131 536 aa10.68□□□□□ -0.7
BRCA1-213ENST00000476777 TJP3O95049 919 aa10.68□□□□□ -0.7
BRCA1-213ENST00000476777 STATHP02808 62 aa10.68□□□□□ -0.7
BRCA1-213ENST00000476777 FOSL1P15407 271 aa10.68□□□□□ -0.7
BRCA1-213ENST00000476777 ADRA1DP25100 572 aa10.68□□□□□ -0.7
BRCA1-213ENST00000476777 GRIA1P42261 906 aa10.68□□□□□ -0.7
BRCA1-213ENST00000476777 TTPAP49638 278 aa10.68□□□□□ -0.7
BRCA1-213ENST00000476777 TAS2R50P59544 299 aa10.68□□□□□ -0.7
BRCA1-213ENST00000476777 PRAMEP78395 509 aa10.68□□□□□ -0.7
BRCA1-213ENST00000476777 MYBPHQ13203 477 aa10.68□□□□□ -0.7
BRCA1-213ENST00000476777 ANKRD20A4Q4UJ75 823 aa10.68□□□□□ -0.7
BRCA1-213ENST00000476777 SFT2D3Q587I9 215 aa10.68□□□□□ -0.7
BRCA1-213ENST00000476777 AARS2Q5JTZ9 985 aaKnown RBP10.68□□□□□ -0.7
BRCA1-213ENST00000476777 CAVIN1Q6NZI2 390 aaKnown RBP10.68□□□□□ -0.7
BRCA1-213ENST00000476777 PCGF5Q86SE9 256 aa10.68□□□□□ -0.7
BRCA1-213ENST00000476777 RPS19BP1Q86WX3 136 aaKnown RBP10.68□□□□□ -0.7
BRCA1-213ENST00000476777 PLD3Q8IV08 490 aa10.68□□□□□ -0.7
BRCA1-213ENST00000476777 RPRMLQ8N4K4 120 aa10.68□□□□□ -0.7
BRCA1-213ENST00000476777 LIME1Q9H400 295 aa10.68□□□□□ -0.7
BRCA1-213ENST00000476777 CDCP1Q9H5V8 836 aa10.68□□□□□ -0.7
BRCA1-213ENST00000476777 TRIM45Q9H8W5 580 aaPredicted RBP10.68□□□□□ -0.7
BRCA1-213ENST00000476777 DNAJB12Q9NXW2 375 aaKnown RBP10.68□□□□□ -0.7
BRCA1-213ENST00000476777 UTP6Q9NYH9 597 aaKnown RBP10.68□□□□□ -0.7
BRCA1-213ENST00000476777 HCN3Q9P1Z3 774 aa10.68□□□□□ -0.7
BRCA1-213ENST00000476777 ST6GALNAC2Q9UJ37 374 aa10.68□□□□□ -0.7
BRCA1-213ENST00000476777 TFR2Q9UP52 801 aa10.68□□□□□ -0.7
BRCA1-213ENST00000476777 GOLGA6L19H0YKK7 550 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 NDC80O14777 642 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 TFECO14948 347 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-213ENST00000476777 CD3EAPO15446 510 aaKnown RBP10.67□□□□□ -0.7
BRCA1-213ENST00000476777 MFAP3LO75121 409 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 CTAG2O75638 210 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 TPM3P06753 285 aa10.67□□□□□ -0.7
BRCA1-213ENST00000476777 RPS3P23396 243 aaKnown RBP eCLIP10.67□□□□□ -0.7
BRCA1-213ENST00000476777 TPP2P29144 1249 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-213ENST00000476777 RFC3P40938 356 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms