RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 GRK3P35626 688 aa27.65■■■□□ 2.02
VEGFA-211ENST00000476772 CPOXP36551 454 aa27.65■■■□□ 2.02
VEGFA-211ENST00000476772 GRIA3P42263 894 aa27.65■■■□□ 2.02
VEGFA-211ENST00000476772 ACSM2AQ08AH3 577 aa27.65■■■□□ 2.02
VEGFA-211ENST00000476772 C14orf28Q4W4Y0 310 aa27.65■■■□□ 2.02
VEGFA-211ENST00000476772 ACSM2BQ68CK6 577 aa27.65■■■□□ 2.02
VEGFA-211ENST00000476772 NOXRED1Q6NXP6 359 aa27.65■■■□□ 2.02
VEGFA-211ENST00000476772 OOSP2Q86WS3 158 aa27.65■■■□□ 2.02
VEGFA-211ENST00000476772 PARP9Q8IXQ6 854 aa27.65■■■□□ 2.02
VEGFA-211ENST00000476772 C1orf52Q8N6N3 182 aaKnown RBP27.65■■■□□ 2.02
VEGFA-211ENST00000476772 KYQ8NBH2 561 aa27.65■■■□□ 2.02
VEGFA-211ENST00000476772 GPR156Q8NFN8 814 aa27.65■■■□□ 2.02
VEGFA-211ENST00000476772 CHTF18Q8WVB6 975 aa27.65■■■□□ 2.02
VEGFA-211ENST00000476772 RSC1A1Q92681 617 aa27.65■■■□□ 2.02
VEGFA-211ENST00000476772 C11orf24Q96F05 449 aaPredicted RBP27.65■■■□□ 2.02
VEGFA-211ENST00000476772 METTL2AQ96IZ6 378 aaKnown RBP27.65■■■□□ 2.02
VEGFA-211ENST00000476772 SERPINI1Q99574 410 aa27.65■■■□□ 2.02
VEGFA-211ENST00000476772 SLC25A23Q9BV35 468 aa27.65■■■□□ 2.02
VEGFA-211ENST00000476772 EBPLQ9BY08 206 aa27.65■■■□□ 2.02
VEGFA-211ENST00000476772 NMRK1Q9NWW6 199 aa27.65■■■□□ 2.02
VEGFA-211ENST00000476772 PPT2Q9UMR5 302 aa27.65■■■□□ 2.02
VEGFA-211ENST00000476772 SNX7Q9UNH6 387 aa27.65■■■□□ 2.02
VEGFA-211ENST00000476772 PI4KAP42356 2102 aa27.64■■■□□ 2.02
VEGFA-211ENST00000476772 OR5K3A6NET4 321 aa27.64■■■□□ 2.02
VEGFA-211ENST00000476772 TBX6O95947 436 aaPredicted RBP27.64■■■□□ 2.02
VEGFA-211ENST00000476772 CFIP05156 583 aa27.64■■■□□ 2.02
VEGFA-211ENST00000476772 PRPS2P11908 318 aa27.64■■■□□ 2.02
VEGFA-211ENST00000476772 ACPPP15309 386 aa27.64■■■□□ 2.02
VEGFA-211ENST00000476772 TYRP1P17643 537 aa27.64■■■□□ 2.02
VEGFA-211ENST00000476772 SDC1P18827 310 aa27.64■■■□□ 2.02
VEGFA-211ENST00000476772 BCL6P41182 706 aa27.64■■■□□ 2.02
VEGFA-211ENST00000476772 SLC25A3Q00325 362 aa27.64■■■□□ 2.02
VEGFA-211ENST00000476772 BIRC2Q13490 618 aa27.64■■■□□ 2.02
VEGFA-211ENST00000476772 BLOC1S3Q6QNY0 202 aa27.64■■■□□ 2.02
VEGFA-211ENST00000476772 PRR23BQ6ZRT6 265 aa27.64■■■□□ 2.02
VEGFA-211ENST00000476772 CLHC1Q8NHS4 586 aa27.64■■■□□ 2.02
VEGFA-211ENST00000476772 NPAS2Q99743 824 aa27.64■■■□□ 2.02
VEGFA-211ENST00000476772 C1orf21Q9H246 121 aa27.64■■■□□ 2.02
VEGFA-211ENST00000476772 UCK1Q9HA47 277 aa27.64■■■□□ 2.02
VEGFA-211ENST00000476772 RUVBL1Q9Y265 456 aaKnown RBP27.64■■■□□ 2.02
VEGFA-211ENST00000476772 SAP18O00422 153 aaKnown RBP27.63■■■□□ 2.01
VEGFA-211ENST00000476772 CAPN3P20807 821 aa27.63■■■□□ 2.01
VEGFA-211ENST00000476772 TACR1P25103 407 aa27.63■■■□□ 2.01
VEGFA-211ENST00000476772 SERPINB1P30740 379 aa27.63■■■□□ 2.01
VEGFA-211ENST00000476772 NUDT2P50583 147 aa27.63■■■□□ 2.01
VEGFA-211ENST00000476772 STX5Q13190 355 aa27.63■■■□□ 2.01
VEGFA-211ENST00000476772 SPIN4Q56A73 249 aa27.63■■■□□ 2.01
VEGFA-211ENST00000476772 C6orf132Q5T0Z8 1188 aa27.63■■■□□ 2.01
VEGFA-211ENST00000476772 SPESP1Q6UW49 350 aa27.63■■■□□ 2.01
VEGFA-211ENST00000476772 PAQR7Q86WK9 346 aa27.63■■■□□ 2.01
VEGFA-211ENST00000476772 TTC28Q96AY4 2481 aa27.63■■■□□ 2.01
VEGFA-211ENST00000476772 CFAP73A6NFT4 308 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 FBP2O00757 339 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 GIMD1P0DJR0 217 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 NQO1P15559 274 aaKnown RBP27.62■■■□□ 2.01
VEGFA-211ENST00000476772 MAGP20916 626 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 JAK1P23458 1154 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 PTX3P26022 381 aaPredicted RBP27.62■■■□□ 2.01
VEGFA-211ENST00000476772 POLR2JP52435 117 aaKnown RBP27.62■■■□□ 2.01
VEGFA-211ENST00000476772 RAE1P78406 368 aaKnown RBP27.62■■■□□ 2.01
VEGFA-211ENST00000476772 RCAN2Q14206 197 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 REP15Q6BDI9 236 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 MS4A8Q9BY19 250 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 CADM1Q9BY67 442 aaKnown RBP27.62■■■□□ 2.01
VEGFA-211ENST00000476772 TMEM45AQ9NWC5 275 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 KMT2EQ8IZD2 1858 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 FAM234BA2RU67 622 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 LILRA5A6NI73 299 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 ITGAXP20702 1163 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 EPHA8P29322 1005 aaPredicted RBP27.62■■■□□ 2.01
VEGFA-211ENST00000476772 HOXD12P35452 270 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 KCNK10P57789 538 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 PPP1CAP62136 330 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 SLC5A12Q1EHB4 618 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 DUOXA1Q1HG43 343 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 VPS26BQ4G0F5 336 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 RIPOR1Q6ZS17 1223 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 NUDT8Q8WV74 236 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 SPDL1Q96EA4 605 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 PPM1MQ96MI6 270 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 TSSK3Q96PN8 268 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 SLC38A3Q99624 504 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 SARGQ9BW04 601 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 LDHAL6BQ9BYZ2 381 aaPredicted RBP27.62■■■□□ 2.01
VEGFA-211ENST00000476772 DPY30Q9C005 99 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 EFCAB1Q9HAE3 211 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 SLC52A3Q9NQ40 469 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 EVA1BQ9NVM1 165 aa27.62■■■□□ 2.01
VEGFA-211ENST00000476772 A0A1B0GTQ1 180 aa27.61■■■□□ 2.01
VEGFA-211ENST00000476772 GSC2O15499 205 aa27.61■■■□□ 2.01
VEGFA-211ENST00000476772 ZW10O43264 779 aa27.61■■■□□ 2.01
VEGFA-211ENST00000476772 MYO1DO94832 1006 aa27.61■■■□□ 2.01
VEGFA-211ENST00000476772 UBXN7O94888 489 aa27.61■■■□□ 2.01
VEGFA-211ENST00000476772 LSSP48449 732 aa27.61■■■□□ 2.01
VEGFA-211ENST00000476772 LPAL2Q16609 132 aa27.61■■■□□ 2.01
VEGFA-211ENST00000476772 HLA-BQ31612 363 aa27.61■■■□□ 2.01
VEGFA-211ENST00000476772 MMEL1Q495T6 779 aa27.61■■■□□ 2.01
VEGFA-211ENST00000476772 ZNF438Q7Z4V0 828 aa27.61■■■□□ 2.01
VEGFA-211ENST00000476772 TBC1D19Q8N5T2 526 aa27.61■■■□□ 2.01
VEGFA-211ENST00000476772 TTLQ8NG68 377 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms