RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 EPS8L3Q8TE67 593 aaKnown RBP9.24□□□□□ -0.93
HDAC3-208ENST00000476739 TTC9Q92623 222 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 EXTL1Q92935 676 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 RERGQ96A58 199 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-208ENST00000476739 TM4SF19Q96DZ7 209 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 BBC3Q96PG8 261 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-208ENST00000476739 PARD6BQ9BYG5 372 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 TXLNGQ9NUQ3 528 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 NUDT4Q9NZJ9 180 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 SRPK3Q9UPE1 567 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 FARSAQ9Y285 508 aaKnown RBP9.24□□□□□ -0.93
HDAC3-208ENST00000476739 DYRK1BQ9Y463 629 aa9.24□□□□□ -0.93
HDAC3-208ENST00000476739 SCN3AQ9NY46 2000 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 A0A1W2PPM1 405 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 CDC14CA4D256 554 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 SMIM23A6NLE4 172 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 FFAR3O14843 346 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 GPR42O15529 346 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 ATP8B1O43520 1251 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 FOXS1O43638 330 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 OR1F1O43749 312 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 CCNT2O60583 730 aaKnown RBP9.23□□□□□ -0.93
HDAC3-208ENST00000476739 KLF7O75840 302 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-208ENST00000476739 RAB40ALP0C0E4 278 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 CD22P20273 847 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 CALRP27797 417 aaKnown RBP9.23□□□□□ -0.93
HDAC3-208ENST00000476739 RPS15AP62244 130 aaKnown RBP9.23□□□□□ -0.93
HDAC3-208ENST00000476739 RPS15P62841 145 aaKnown RBP9.23□□□□□ -0.93
HDAC3-208ENST00000476739 REEP5Q00765 189 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 CDC20Q12834 499 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 CDC16Q13042 620 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 NCF4Q15080 339 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 TBR1Q16650 682 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 PFKFB4Q16877 469 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 FAM214AQ32MH5 1076 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 NKAIN1Q4KMZ8 207 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 CDKL4Q5MAI5 379 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 YOD1Q5VVQ6 348 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-208ENST00000476739 ADNP2Q6IQ32 1131 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 MRPL14Q6P1L8 145 aaKnown RBP9.23□□□□□ -0.93
HDAC3-208ENST00000476739 TIFABQ6ZNK6 161 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 SLCO4C1Q6ZQN7 724 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 TAOK1Q7L7X3 1001 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 CCDC91Q7Z6B0 441 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 TCAIMQ8N3R3 496 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 TMEM151AQ8N4L1 468 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 ANKRD53Q8N9V6 530 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 KCT2Q8NC54 265 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.23□□□□□ -0.93
HDAC3-208ENST00000476739 CABS1Q96KC9 395 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 EFHD1Q9BUP0 239 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 SARGQ9BW04 601 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 GPR87Q9BY21 358 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 NLNQ9BYT8 704 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 CD244Q9BZW8 370 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 PELI2Q9HAT8 420 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 DNAJC11Q9NVH1 559 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 TMEM216Q9P0N5 145 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 IFT80Q9P2H3 777 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-208ENST00000476739 PSMC3IPQ9P2W1 217 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-208ENST00000476739 XPR1Q9UBH6 696 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 CTSFQ9UBX1 484 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 FETUBQ9UGM5 382 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 KCND3Q9UK17 655 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 TCFL5Q9UL49 500 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 KCNE2Q9Y6J6 123 aa9.23□□□□□ -0.93
HDAC3-208ENST00000476739 DSPP15924 2871 aaKnown RBP9.23□□□□□ -0.93
HDAC3-208ENST00000476739 A0A0A6YYC8 382 aaPredicted RBP9.22□□□□□ -0.93
HDAC3-208ENST00000476739 IQANK1A0A1B0GTG1 560 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 TRBC2A0A5B9 178 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 I3L1I5 382 aaPredicted RBP9.22□□□□□ -0.93
HDAC3-208ENST00000476739 TK2O00142 265 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 KLK8O60259 260 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 IPO13O94829 963 aaKnown RBP9.22□□□□□ -0.93
HDAC3-208ENST00000476739 SIX3O95343 332 aaPredicted RBP9.22□□□□□ -0.93
HDAC3-208ENST00000476739 ONECUT2O95948 504 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 B3GALT4O96024 378 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 S100BP04271 92 aaPredicted RBP9.22□□□□□ -0.93
HDAC3-208ENST00000476739 C1GALT1C1LP0DN25 315 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 GNAZP19086 355 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 GRK3P35626 688 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 SCTRP47872 440 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 EMP3P54852 163 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 HYAL2Q12891 473 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 SLBPQ14493 270 aaKnown RBP eCLIP9.22□□□□□ -0.93
HDAC3-208ENST00000476739 SETDB1Q15047 1291 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 SYT16Q17RD7 645 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 MUM1Q2TAK8 710 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 DEFB109BQ30KR1 87 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 LGSNQ5TDP6 509 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 FAM219BQ5XKK7 198 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 ATG9BQ674R7 924 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 TMEM214Q6NUQ4 689 aaKnown RBP9.22□□□□□ -0.93
HDAC3-208ENST00000476739 KLC3Q6P597 504 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 SHISA6Q6ZSJ9 500 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 SH2D5Q6ZV89 423 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 VN1R5Q7Z5H4 357 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 ASPGQ86U10 573 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 SNX31Q8N9S9 440 aa9.22□□□□□ -0.93
HDAC3-208ENST00000476739 ZCCHC10Q8TBK6 192 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms