RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 EPM2AB3EWF7 344 aa5.29□□□□□ -1.56
SMC5-203ENST00000475540 PI4K2BG5E9Z4 385 aa5.29□□□□□ -1.56
SMC5-203ENST00000475540 H7C0S8 307 aa5.29□□□□□ -1.56
SMC5-203ENST00000475540 UBE2CO00762 179 aa5.29□□□□□ -1.56
SMC5-203ENST00000475540 TFECO14948 347 aaPredicted RBP5.29□□□□□ -1.56
SMC5-203ENST00000475540 PDHA2P29803 388 aa5.29□□□□□ -1.56
SMC5-203ENST00000475540 HSPA4P34932 840 aa5.29□□□□□ -1.56
SMC5-203ENST00000475540 CTNNA1P35221 906 aaKnown RBP5.29□□□□□ -1.56
SMC5-203ENST00000475540 SFTPDP35247 375 aa5.29□□□□□ -1.56
SMC5-203ENST00000475540 LY6DQ14210 128 aa5.29□□□□□ -1.56
SMC5-203ENST00000475540 LACTB2Q53H82 288 aaPredicted RBP5.29□□□□□ -1.56
SMC5-203ENST00000475540 GPRIN3Q6ZVF9 776 aa5.29□□□□□ -1.56
SMC5-203ENST00000475540 CHST3Q7LGC8 479 aa5.29□□□□□ -1.56
SMC5-203ENST00000475540 AQP11Q8NBQ7 271 aa5.29□□□□□ -1.56
SMC5-203ENST00000475540 CAMKVQ8NCB2 501 aa5.29□□□□□ -1.56
SMC5-203ENST00000475540 OR4D10Q8NGI6 311 aa5.29□□□□□ -1.56
SMC5-203ENST00000475540 RASL10AQ92737 203 aa5.29□□□□□ -1.56
SMC5-203ENST00000475540 VMP1Q96GC9 406 aa5.29□□□□□ -1.56
SMC5-203ENST00000475540 KLHL5Q96PQ7 755 aa5.29□□□□□ -1.56
SMC5-203ENST00000475540 GAL3ST4Q96RP7 486 aa5.29□□□□□ -1.56
SMC5-203ENST00000475540 FN3KQ9H479 309 aa5.29□□□□□ -1.56
SMC5-203ENST00000475540 EGLN3Q9H6Z9 239 aa5.29□□□□□ -1.56
SMC5-203ENST00000475540 LNPEPQ9UIQ6 1025 aa5.29□□□□□ -1.56
SMC5-203ENST00000475540 ZHX2Q9Y6X8 837 aa5.29□□□□□ -1.56
SMC5-203ENST00000475540 AADACP22760 399 aa5.28□□□□□ -1.56
SMC5-203ENST00000475540 OAS2P29728 719 aaKnown RBP5.28□□□□□ -1.56
SMC5-203ENST00000475540 PPP5CP53041 499 aa5.28□□□□□ -1.56
SMC5-203ENST00000475540 DCDC1P59894 354 aa5.28□□□□□ -1.56
SMC5-203ENST00000475540 IRX4P78413 519 aa5.28□□□□□ -1.56
SMC5-203ENST00000475540 PTGISQ16647 500 aa5.28□□□□□ -1.56
SMC5-203ENST00000475540 FGD3Q5JSP0 725 aa5.28□□□□□ -1.56
SMC5-203ENST00000475540 HECTD3Q5T447 861 aa5.28□□□□□ -1.56
SMC5-203ENST00000475540 ENPP7Q6UWV6 458 aa5.28□□□□□ -1.56
SMC5-203ENST00000475540 GBP7Q8N8V2 638 aaPredicted RBP5.28□□□□□ -1.56
SMC5-203ENST00000475540 MRPS27Q92552 414 aaKnown RBP5.28□□□□□ -1.56
SMC5-203ENST00000475540 SLC45A3Q96JT2 553 aa5.28□□□□□ -1.56
SMC5-203ENST00000475540 FAM218AQ96MZ4 157 aa5.28□□□□□ -1.56
SMC5-203ENST00000475540 GTPBP2Q9BX10 602 aaKnown RBP5.28□□□□□ -1.56
SMC5-203ENST00000475540 SNX25Q9H3E2 840 aa5.28□□□□□ -1.56
SMC5-203ENST00000475540 ARGLU1Q9NWB6 273 aaPredicted RBP5.28□□□□□ -1.56
SMC5-203ENST00000475540 POLLQ9UGP5 575 aa5.28□□□□□ -1.56
SMC5-203ENST00000475540 CCL24O00175 119 aa5.27□□□□□ -1.57
SMC5-203ENST00000475540 SERPING1P05155 500 aa5.27□□□□□ -1.57
SMC5-203ENST00000475540 THEGLP0DJG4 465 aa5.27□□□□□ -1.57
SMC5-203ENST00000475540 GATA2P23769 480 aaPredicted RBP5.27□□□□□ -1.57
SMC5-203ENST00000475540 CACNG1Q06432 222 aa5.27□□□□□ -1.57
SMC5-203ENST00000475540 PAX8Q06710 450 aa5.27□□□□□ -1.57
SMC5-203ENST00000475540 RBBP7Q16576 425 aa5.27□□□□□ -1.57
SMC5-203ENST00000475540 CYB5D1Q6P9G0 228 aa5.27□□□□□ -1.57
SMC5-203ENST00000475540 LCLAT1Q6UWP7 414 aa5.27□□□□□ -1.57
SMC5-203ENST00000475540 AMIGO1Q86WK6 493 aa5.27□□□□□ -1.57
SMC5-203ENST00000475540 VSIG1Q86XK7 387 aa5.27□□□□□ -1.57
SMC5-203ENST00000475540 OR2L2Q8NH16 312 aa5.27□□□□□ -1.57
SMC5-203ENST00000475540 LRRC15Q8TF66 581 aa5.27□□□□□ -1.57
SMC5-203ENST00000475540 ATXN7L3BQ96GX2 97 aa5.27□□□□□ -1.57
SMC5-203ENST00000475540 SPATA17Q96L03 361 aa5.27□□□□□ -1.57
SMC5-203ENST00000475540 SOSTQ9BQB4 213 aa5.27□□□□□ -1.57
SMC5-203ENST00000475540 OVOL2Q9BRP0 275 aa5.27□□□□□ -1.57
SMC5-203ENST00000475540 SLC25A23Q9BV35 468 aa5.27□□□□□ -1.57
SMC5-203ENST00000475540 TRIM6Q9C030 488 aaPredicted RBP5.27□□□□□ -1.57
SMC5-203ENST00000475540 RNF121Q9H920 327 aa5.27□□□□□ -1.57
SMC5-203ENST00000475540 MRGBPQ9NV56 204 aa5.27□□□□□ -1.57
SMC5-203ENST00000475540 PKD2L2Q9NZM6 624 aa5.27□□□□□ -1.57
SMC5-203ENST00000475540 CSAG2Q9Y5P2 127 aa5.27□□□□□ -1.57
SMC5-203ENST00000475540 SLC1A7O00341 560 aa5.26□□□□□ -1.57
SMC5-203ENST00000475540 TBX10O75333 385 aa5.26□□□□□ -1.57
SMC5-203ENST00000475540 LUC7L3O95232 432 aaKnown RBP5.26□□□□□ -1.57
SMC5-203ENST00000475540 ACAT1P24752 427 aaKnown RBP5.26□□□□□ -1.57
SMC5-203ENST00000475540 DHODHQ02127 395 aa5.26□□□□□ -1.57
SMC5-203ENST00000475540 SRSF9Q13242 221 aaKnown RBP eCLIP5.26□□□□□ -1.57
SMC5-203ENST00000475540 TRA2AQ13595 282 aaKnown RBP eCLIP5.26□□□□□ -1.57
SMC5-203ENST00000475540 COG2Q14746 738 aa5.26□□□□□ -1.57
SMC5-203ENST00000475540 FAM189A2Q15884 450 aa5.26□□□□□ -1.57
SMC5-203ENST00000475540 TCTEX1D4Q5JR98 221 aa5.26□□□□□ -1.57
SMC5-203ENST00000475540 LCE3CQ5T5A8 94 aa5.26□□□□□ -1.57
SMC5-203ENST00000475540 SPINK14Q6IE38 97 aa5.26□□□□□ -1.57
SMC5-203ENST00000475540 FAM43BQ6ZT52 329 aaPredicted RBP5.26□□□□□ -1.57
SMC5-203ENST00000475540 ZSCAN30Q86W11 494 aa5.26□□□□□ -1.57
SMC5-203ENST00000475540 ZFAND4Q86XD8 727 aa5.26□□□□□ -1.57
SMC5-203ENST00000475540 LMNTD2Q8IXW0 634 aa5.26□□□□□ -1.57
SMC5-203ENST00000475540 TCEANCQ8N8B7 351 aa5.26□□□□□ -1.57
SMC5-203ENST00000475540 AMER3Q8N944 861 aa5.26□□□□□ -1.57
SMC5-203ENST00000475540 C11orf45Q8TAV5 145 aa5.26□□□□□ -1.57
SMC5-203ENST00000475540 MIPOL1Q8TD10 442 aa5.26□□□□□ -1.57
SMC5-203ENST00000475540 CNRIP1Q96F85 164 aaPredicted RBP5.26□□□□□ -1.57
SMC5-203ENST00000475540 CNDP2Q96KP4 475 aaKnown RBP5.26□□□□□ -1.57
SMC5-203ENST00000475540 LGMNQ99538 433 aa5.26□□□□□ -1.57
SMC5-203ENST00000475540 NDNQ99608 321 aa5.26□□□□□ -1.57
SMC5-203ENST00000475540 RIMS4Q9H426 269 aaPredicted RBP5.26□□□□□ -1.57
SMC5-203ENST00000475540 GPN1Q9HCN4 374 aaPredicted RBP5.26□□□□□ -1.57
SMC5-203ENST00000475540 TBC1D13Q9NVG8 400 aa5.26□□□□□ -1.57
SMC5-203ENST00000475540 HACD3Q9P035 362 aa5.26□□□□□ -1.57
SMC5-203ENST00000475540 IL36AQ9UHA7 158 aa5.26□□□□□ -1.57
SMC5-203ENST00000475540 CCL27Q9Y4X3 112 aa5.26□□□□□ -1.57
SMC5-203ENST00000475540 A8MXE2 369 aa5.25□□□□□ -1.57
SMC5-203ENST00000475540 NPIPB9F8W1W9 429 aa5.25□□□□□ -1.57
SMC5-203ENST00000475540 SURF4O15260 269 aa5.25□□□□□ -1.57
SMC5-203ENST00000475540 BAG3O95817 575 aa5.25□□□□□ -1.57
SMC5-203ENST00000475540 CCDC175P0C221 793 aa5.25□□□□□ -1.57
SMC5-203ENST00000475540 PSMA3P25788 255 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms