RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 CENPFP49454 3210 aa18.01■□□□□ 0.47
ECHDC1-214ENST00000474289 STX7O15400 261 aaKnown RBP18■□□□□ 0.47
ECHDC1-214ENST00000474289 FHP07954 510 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 CSF3P09919 207 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 TACR1P25103 407 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 ACVRL1P37023 503 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 KIR2DL3P43628 341 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 TTPAP49638 278 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 CLCN7P51798 805 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 FAM189BP81408 668 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 GLYR1Q49A26 553 aaPredicted RBP18■□□□□ 0.47
ECHDC1-214ENST00000474289 SDE2Q6IQ49 451 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 ZNF767PQ75MW2 155 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 SLC51BQ86UW2 128 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 CIR1Q86X95 450 aaPredicted RBP18■□□□□ 0.47
ECHDC1-214ENST00000474289 ZNF557Q8N988 423 aaPredicted RBP18■□□□□ 0.47
ECHDC1-214ENST00000474289 CDCA4Q9BXL8 241 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 FAM83DQ9H4H8 585 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 SNTG1Q9NSN8 517 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 RLIMQ9NVW2 624 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 TEKT2Q9UIF3 430 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 KLHL21Q9UJP4 597 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 MANBAO00462 879 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 HLA-DMAP28067 261 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 MC4RP32245 332 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 MS4A13Q5J8X5 152 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 TWF2Q6IBS0 349 aaKnown RBP18■□□□□ 0.47
ECHDC1-214ENST00000474289 OVOS1Q6IE37 1185 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 FAM131AQ6UXB0 335 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 SLC5A8Q8N695 610 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 C12orf10Q9HB07 376 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 FKBPLQ9UIM3 349 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 PCDHGB3Q9Y5G1 929 aa18■□□□□ 0.47
ECHDC1-214ENST00000474289 RRN3P2A6NIE6 340 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 CLIC1O00299 241 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 CXCL11O14625 94 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 GPR39O43194 453 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 DPM1O60762 260 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 RAMP2O60895 175 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 OR2B3O76000 313 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 LRATO95237 230 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 ENGP17813 658 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 RORCP51449 518 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 CDC42EP1Q00587 391 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 CACNB2Q08289 660 aaPredicted RBP17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 SERINC3Q13530 473 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 VEPH1Q14D04 833 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 TOR2AQ5JU69 321 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 TIGD3Q6B0B8 471 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 FAM171BQ6P995 826 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 AMIGO1Q86WK6 493 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 FAM217AQ8IXS0 508 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 IGSF8Q969P0 613 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 OMA1Q96E52 524 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 SERPINB11Q96P15 392 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 OPALINQ96PE5 141 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 PAAF1Q9BRP4 392 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 ACPTQ9BZG2 426 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 ZNF556Q9HAH1 456 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 HHATLQ9HCP6 504 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 TMCC2O75069 709 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 C1QBP02746 253 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 CRYBA2P53672 197 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 KCNJ10P78508 379 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 TEKQ02763 1124 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 ERICH5Q6P6B1 374 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 XKRXQ6PP77 449 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 CREB3L2Q70SY1 520 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 FAM181AQ8N9Y4 354 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 WDR36Q8NI36 951 aaKnown RBP17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 NIPAL2Q9H841 368 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 IMPAD1Q9NX62 359 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 DUSP12Q9UNI6 340 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 CMAHPQ9Y471 501 aa17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 ARIH1Q9Y4X5 557 aaPredicted RBP17.99■□□□□ 0.47
ECHDC1-214ENST00000474289 SMIM35A0A1B0GVV1 85 aa17.98■□□□□ 0.47
ECHDC1-214ENST00000474289 A0A1W2PQH9 124 aa17.98■□□□□ 0.47
ECHDC1-214ENST00000474289 PPIGQ13427 754 aaKnown RBP eCLIP17.98■□□□□ 0.478e-6■■■■□ 22.7
ECHDC1-214ENST00000474289 QPRTQ15274 297 aa17.98■□□□□ 0.47
ECHDC1-214ENST00000474289 TAF1AQ15573 450 aaPredicted RBP17.98■□□□□ 0.47
ECHDC1-214ENST00000474289 TATDN3Q17R31 274 aa17.98■□□□□ 0.47
ECHDC1-214ENST00000474289 TIGD5Q53EQ6 642 aa17.98■□□□□ 0.47
ECHDC1-214ENST00000474289 ZRANB3Q5FWF4 1079 aa17.98■□□□□ 0.47
ECHDC1-214ENST00000474289 SAXO2Q658L1 398 aa17.98■□□□□ 0.47
ECHDC1-214ENST00000474289 NADSYN1Q6IA69 706 aa17.98■□□□□ 0.47
ECHDC1-214ENST00000474289 LAMTOR1Q6IAA8 161 aa17.98■□□□□ 0.47
ECHDC1-214ENST00000474289 RNF165Q6ZSG1 346 aa17.98■□□□□ 0.47
ECHDC1-214ENST00000474289 CAMKK1Q8N5S9 505 aa17.98■□□□□ 0.47
ECHDC1-214ENST00000474289 NLGN4YQ8NFZ3 816 aaPredicted RBP17.98■□□□□ 0.47
ECHDC1-214ENST00000474289 USP7Q93009 1102 aa17.98■□□□□ 0.47
ECHDC1-214ENST00000474289 TRMT61AQ96FX7 289 aaKnown RBP17.98■□□□□ 0.47
ECHDC1-214ENST00000474289 SLC39A13Q96H72 371 aa17.98■□□□□ 0.47
ECHDC1-214ENST00000474289 NIPSNAP1Q9BPW8 284 aa17.98■□□□□ 0.47
ECHDC1-214ENST00000474289 ABCG8Q9H221 673 aa17.98■□□□□ 0.47
ECHDC1-214ENST00000474289 ACTL7AQ9Y615 435 aa17.98■□□□□ 0.47
ECHDC1-214ENST00000474289 LOC730098B7Z3J9 87 aa17.98■□□□□ 0.47
ECHDC1-214ENST00000474289 WDR47O94967 919 aa17.98■□□□□ 0.47
ECHDC1-214ENST00000474289 PSKH1P11801 424 aa17.98■□□□□ 0.47
ECHDC1-214ENST00000474289 SOX3P41225 446 aa17.98■□□□□ 0.47
ECHDC1-214ENST00000474289 RUNX1T1Q06455 604 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms