RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 FAM129CQ86XR2 697 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 SFTPA2Q8IWL1 248 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 MIER2Q8N344 545 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 FAM181AQ8N9Y4 354 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 SRFBP1Q8NEF9 429 aaKnown RBP9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 OR2I1PQ8NGU4 316 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 RHBDD1Q8TEB9 315 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 STARD8Q92502 1023 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 TCEAL3Q969E4 200 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 THAP11Q96EK4 314 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 MAELQ96JY0 434 aaKnown RBP9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 OR2A14Q96R47 310 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 OR52B2Q96RD2 323 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 ZFYVE21Q9BQ24 234 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 ABCG4Q9H172 646 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 KCNH6Q9H252 994 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 SEMA6CQ9H3T2 930 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 CAAP1Q9H8G2 361 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 KCNK13Q9HB14 408 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 FANCEQ9HB96 536 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 SLC6A20Q9NP91 592 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 DMRT3Q9NQL9 472 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 C1GALT1Q9NS00 363 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 FARSBQ9NSD9 589 aaKnown RBP9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 TXLNGQ9NUQ3 528 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 EPHA6Q9UF33 1036 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 KLHL3Q9UH77 587 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 MAPRE3Q9UPY8 281 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 SH2B3Q9UQQ2 575 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 RUVBL1Q9Y265 456 aaKnown RBP9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 POLR3HQ9Y535 204 aaPredicted RBP9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 PTGDR2Q9Y5Y4 395 aa9.86□□□□□ -0.83
PRPF38A-202ENST00000474048 PCDH15Q96QU1 1955 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 KCNE1BA0A087WTH5 132 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 IGHV1OR21-1A0A087WYE8 117 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 GNG14A0A1W2PPG7 69 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 LNP1A1A4G5 178 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 SERTM1A2A2V5 107 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 CCT8L1PA6NM43 557 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 MAGEB17A8MXT2 336 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 TXNDC9O14530 226 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 SLC22A2O15244 555 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 CLEC3AO75596 197 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 TGFB1P01137 390 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 JUNP05412 331 aaKnown RBP9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 PRPS2P11908 318 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 CD22P20273 847 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 PEBP1P30086 187 aaKnown RBP9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 GRIA3P42263 894 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 RASSF2P50749 326 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 MNAT1P51948 309 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 OR1D5P58170 312 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 RPS13P62277 151 aaKnown RBP9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 SPEM2Q0P670 501 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 SLC14A1Q13336 389 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 PLA2G2CQ5R387 149 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 SNAP47Q5SQN1 464 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 TRIM40Q6P9F5 258 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 CYB5D1Q6P9G0 228 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 ATG14Q6ZNE5 492 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 ASPGQ86U10 573 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 ZFAND4Q86XD8 727 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 CARFQ8N187 725 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 C19orf47Q8N9M1 422 aaKnown RBP9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 MFSD9Q8NBP5 474 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 CAMKVQ8NCB2 501 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 OR4K1Q8NGD4 311 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 CDC26Q8NHZ8 85 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 WDR20Q8TBZ3 569 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 CMTM5Q96DZ9 223 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 TCTN2Q96GX1 697 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 METTL2AQ96IZ6 378 aaKnown RBP9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 CNDP2Q96KP4 475 aaKnown RBP9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 MARK4Q96L34 752 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 NRTNQ99748 197 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 C1orf50Q9BV19 199 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 ACPTQ9BZG2 426 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 NMUR2Q9GZQ4 415 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 RAB33BQ9H082 229 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 KLHL25Q9H0H3 589 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 TUBB1Q9H4B7 451 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 PDE7BQ9NP56 450 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 HCN4Q9Y3Q4 1203 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 TSC22D4Q9Y3Q8 395 aa9.85□□□□□ -0.83
PRPF38A-202ENST00000474048 A0A0J9YVX5 310 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 PSMD12O00232 456 aaPredicted RBP9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 TRIM38O00635 465 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 ZNF195O14628 629 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 LSM1O15116 133 aaKnown RBP9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 PRICKLE3O43900 615 aaPredicted RBP9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 HNRNPCL1O60812 293 aaKnown RBP9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 GUCY1B2O75343 617 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 SH3BGRLO75368 114 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 ATP5HO75947 161 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 ZBTB11O95625 1053 aaPredicted RBP9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 EIF2S1P05198 315 aaKnown RBP9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 RPLP0P05388 317 aaKnown RBP9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 ESRRAP11474 423 aaPredicted RBP9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 ADSLP30566 484 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms