RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 TBC1D1Q86TI0 1168 aaPredicted RBP12.52□□□□□ -0.41
TPM3-216ENST00000473036 ZSCAN1Q8NBB4 408 aa12.52□□□□□ -0.41
TPM3-216ENST00000473036 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.52□□□□□ -0.41
TPM3-216ENST00000473036 EXT2Q93063 718 aa12.52□□□□□ -0.41
TPM3-216ENST00000473036 EGFL8Q99944 293 aa12.52□□□□□ -0.41
TPM3-216ENST00000473036 ZFYVE21Q9BQ24 234 aa12.52□□□□□ -0.41
TPM3-216ENST00000473036 PCBD2Q9H0N5 130 aa12.52□□□□□ -0.41
TPM3-216ENST00000473036 NMRAL1Q9HBL8 299 aa12.52□□□□□ -0.41
TPM3-216ENST00000473036 TMEM184CQ9NVA4 438 aa12.52□□□□□ -0.41
TPM3-216ENST00000473036 ANKMY1Q9P2S6 941 aa12.52□□□□□ -0.41
TPM3-216ENST00000473036 PADI1Q9ULC6 663 aa12.52□□□□□ -0.41
TPM3-216ENST00000473036 SNX7Q9UNH6 387 aa12.52□□□□□ -0.41
TPM3-216ENST00000473036 MRPS2Q9Y399 296 aaKnown RBP12.52□□□□□ -0.41
TPM3-216ENST00000473036 PCDHGA4Q9Y5G9 962 aa12.52□□□□□ -0.41
TPM3-216ENST00000473036 A0A1W2PPM1 405 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 MAP2K7O14733 419 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 NKX2-8O15522 239 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 MAP3K7O43318 606 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 SRPX2O60687 465 aaPredicted RBP12.51□□□□□ -0.41
TPM3-216ENST00000473036 CCNDBP1O95273 360 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 FURINP09958 794 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 EZRP15311 586 aaKnown RBP12.51□□□□□ -0.41
TPM3-216ENST00000473036 CCND1P24385 295 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 VARSP26640 1264 aaKnown RBP12.51□□□□□ -0.41
TPM3-216ENST00000473036 DLSTP36957 453 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 HNMTP50135 292 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 RELAQ04206 551 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 LINC00303Q3SY05 128 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 KRT71Q3SY84 523 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 HSP90B2PQ58FF3 399 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 ATP1A1-AS1Q5TC04 95 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 CYB5D1Q6P9G0 228 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 COX15Q7KZN9 410 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 LCA5Q86VQ0 697 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 C17orf64Q86WR6 236 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 RHEBL1Q8TAI7 183 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 STAG3L4Q8TBR4 150 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 EPS8L3Q8TE67 593 aaKnown RBP12.51□□□□□ -0.41
TPM3-216ENST00000473036 SLC5A11Q8WWX8 675 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 ATL1Q8WXF7 558 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 MR1Q95460 341 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 CLIP3Q96DZ5 547 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 TM4SF19Q96DZ7 209 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 MOCOSQ96EN8 888 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 PGM2Q96G03 612 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 CABS1Q96KC9 395 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 ZIM3Q96PE6 472 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 AICDAQ9GZX7 198 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 ADNPQ9H2P0 1102 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 TBK1Q9UHD2 729 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 TLK1Q9UKI8 766 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 RNF112Q9ULX5 631 aa12.51□□□□□ -0.41
TPM3-216ENST00000473036 RUVBL1Q9Y265 456 aaKnown RBP12.51□□□□□ -0.41
TPM3-216ENST00000473036 MED13Q9UHV7 2174 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 KCNE1BA0A087WTH5 132 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 TLDC2A0PJX2 215 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 RGS16O15492 202 aaPredicted RBP12.5□□□□□ -0.41
TPM3-216ENST00000473036 KLK8O60259 260 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 WDR47O94967 919 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 EIF2S1P05198 315 aaKnown RBP12.5□□□□□ -0.41
TPM3-216ENST00000473036 TCN2P20062 427 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 CD22P20273 847 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 SLCO1A2P46721 670 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 ATP1A2P50993 1020 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 DNASE1L3Q13609 305 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 SLC9A5Q14940 896 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 ACAP2Q15057 778 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 FAM83EQ2M2I3 478 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 CDKL4Q5MAI5 379 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 CEP85LQ5SZL2 805 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 FAM219BQ5XKK7 198 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 SULT1C3Q6IMI6 304 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 TLDC1Q6P9B6 456 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 NXPE4Q6UWF7 544 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 SLCO4C1Q6ZQN7 724 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 TTLL10Q6ZVT0 673 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 ADCK2Q7Z695 626 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 GPR135Q8IZ08 494 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 METTL27Q8N6F8 245 aaPredicted RBP12.5□□□□□ -0.41
TPM3-216ENST00000473036 ANKRD53Q8N9V6 530 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 ACMSDQ8TDX5 336 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 N4BP2L2Q92802 583 aaPredicted RBP12.5□□□□□ -0.41
TPM3-216ENST00000473036 SLC45A3Q96JT2 553 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 HAUS8Q9BT25 410 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 SARGQ9BW04 601 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 GPN2Q9H9Y4 310 aaPredicted RBP12.5□□□□□ -0.41
TPM3-216ENST00000473036 CUTCQ9NTM9 273 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 NUDT4Q9NZJ9 180 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 CD274Q9NZQ7 290 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 LGALS13Q9UHV8 139 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 AP1M2Q9Y6Q5 423 aa12.5□□□□□ -0.41
TPM3-216ENST00000473036 TEX15Q9BXT5 2789 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 CCDC189A1A4V9 331 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 HYKKA2RU49 373 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 SUPT3HB4E1H0 165 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 GOLGA8RI6L899 631 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 FOXS1O43638 330 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 SUPT3HO75486 399 aa12.49□□□□□ -0.41
TPM3-216ENST00000473036 TBX6O95947 436 aaPredicted RBP12.49□□□□□ -0.41
TPM3-216ENST00000473036 ONECUT2O95948 504 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms