RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 AP3S1Q92572 193 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 DUSP26Q9BV47 211 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 BCAS3Q9H6U6 928 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 TRIM39Q9HCM9 518 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 ENAMQ9NRM1 1142 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 ZNF222Q9UK12 451 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 ITGB1BP2Q9UKP3 347 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 SLC22A14Q9Y267 594 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 ZDHHC9Q9Y397 364 aa8.33□□□□□ -1.08
CD47-204ENST00000471694 FKBP6O75344 327 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 CSF2P04141 144 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 ZNF806P0C7X5 589 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 MATN1P21941 496 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 NUDT1P36639 197 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 POU6F2P78424 691 aaPredicted RBP8.32□□□□□ -1.08
CD47-204ENST00000471694 NNATQ16517 81 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 GXYLT1Q4G148 440 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 ARSHQ5FYA8 562 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 GPRC6AQ5T6X5 926 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 ZZZ3Q8IYH5 903 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 MGME1Q9BQP7 344 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 FEM1AQ9BSK4 669 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 MARCH7Q9H992 704 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 PCDHB16Q9NRJ7 776 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 FBXO9Q9UK97 447 aaPredicted RBP8.32□□□□□ -1.08
CD47-204ENST00000471694 MRC1P22897 1456 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 IFT172Q9UG01 1749 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 NSG1A0A0A6YYJ2 146 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 A0A1B0GVI7 797 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 ZNF879B4DU55 563 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 H3BSH0 61 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 ADAMTS4O75173 837 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 TACSTD2P09758 323 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 RNH1P13489 461 aaKnown RBP8.32□□□□□ -1.08
CD47-204ENST00000471694 C6P13671 934 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 KCNE1P15382 129 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 HOXB9P17482 250 aaPredicted RBP8.32□□□□□ -1.08
CD47-204ENST00000471694 POU3F2P20265 443 aaPredicted RBP8.32□□□□□ -1.08
CD47-204ENST00000471694 ECHS1P30084 290 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 PSME3P61289 254 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 RPS15AP62244 130 aaKnown RBP8.32□□□□□ -1.08
CD47-204ENST00000471694 LIPEQ05469 1076 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 ADRM1Q16186 407 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 THOC7Q6I9Y2 204 aaKnown RBP8.32□□□□□ -1.08
CD47-204ENST00000471694 C3orf33Q6P1S2 294 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 SYCE2Q6PIF2 218 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 CEACAM20Q6UY09 585 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 PPP1R3BQ86XI6 285 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 NRROSQ86YC3 692 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 YIPF7Q8N8F6 280 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 TSEN2Q8NCE0 465 aaKnown RBP8.32□□□□□ -1.08
CD47-204ENST00000471694 DENND6BQ8NEG7 585 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 LRRC20Q8TCA0 184 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 PTCD3Q96EY7 689 aaKnown RBP8.32□□□□□ -1.08
CD47-204ENST00000471694 LRIG1Q96JA1 1093 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 PWWP2AQ96N64 755 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 CDC6Q99741 560 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 PRRX2Q99811 253 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 EGFL7Q9UHF1 273 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 BAZ2BQ9UIF8 2168 aaKnown RBP8.32□□□□□ -1.08
CD47-204ENST00000471694 GLOD5A6NK44 160 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 TEX46H3BTG2 121 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 ACTL6BO94805 426 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 EDN1P05305 212 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 TPSB2P20231 275 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 EMP2P54851 167 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 BNIP2Q12982 314 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 TPSAB1Q15661 275 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 MORN1Q5T089 497 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 CLEC6AQ6EIG7 209 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.32□□□□□ -1.08
CD47-204ENST00000471694 ESAMQ96AP7 390 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 PPM1MQ96MI6 270 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 LRIT1Q9P2V4 623 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 OR51F1A6NGY5 319 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 OTOL1A6NHN0 477 aaPredicted RBP8.32□□□□□ -1.08
CD47-204ENST00000471694 H3BML4 177 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 M0R2N6 131 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 NIPSNAP2O75323 286 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 RPP14O95059 124 aaKnown RBP8.32□□□□□ -1.08
CD47-204ENST00000471694 BCL10O95999 233 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 PRPS2P11908 318 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 EPHA3P29320 983 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 GABRA3P34903 492 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 CAPGP40121 348 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 P2RY2P41231 377 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 GJA8P48165 433 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 ARPC4P59998 168 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 RUNX2Q13950 521 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 RBM39Q14498 530 aaKnown RBP8.32□□□□□ -1.08
CD47-204ENST00000471694 MAPK11Q15759 364 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 TIGD6Q17RP2 521 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 ZFP1Q6P2D0 407 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 ENPP6Q6UWR7 440 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 OSTM1Q86WC4 334 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 ZNF676Q8N7Q3 588 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 PELOQ9BRX2 385 aaKnown RBP8.32□□□□□ -1.08
CD47-204ENST00000471694 SLC35A5Q9BS91 424 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 RDH8Q9NYR8 311 aa8.32□□□□□ -1.08
CD47-204ENST00000471694 PLEKHA6Q9Y2H5 1048 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms