RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 CLGNO14967 610 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 NUDT17P0C025 328 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 GFAPP14136 432 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 AHRP35869 848 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 SCTRP47872 440 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 ALDH18A1P54886 795 aaKnown RBP14.57□□□□□ -0.08
SDC3-203ENST00000471567 REEP5Q00765 189 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 FAM53BQ14153 422 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 SETDB1Q15047 1291 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 NCF4Q15080 339 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 PDK4Q16654 411 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 NDUFA9Q16795 377 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 HKDC1Q2TB90 917 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 ATG9BQ674R7 924 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 METTL2BQ6P1Q9 378 aaKnown RBP14.57□□□□□ -0.08
SDC3-203ENST00000471567 TMPRSS11BQ86T26 416 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 ASPGQ86U10 573 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 ARHGEF39Q8N4T4 335 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 ENDOVQ8N8Q3 282 aaKnown RBP14.57□□□□□ -0.08
SDC3-203ENST00000471567 MZB1Q8WU39 189 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 SLC13A3Q8WWT9 602 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 ESAMQ96AP7 390 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 FKBP10Q96AY3 582 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 SCYL1Q96KG9 808 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 C10orf90Q96M02 699 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 CATSPER2Q96P56 530 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 MRPL57Q9BQC6 102 aaKnown RBP14.57□□□□□ -0.08
SDC3-203ENST00000471567 ACTL8Q9H568 366 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 NT5DC2Q9H857 520 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 ZNF358Q9NW07 568 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 IFT80Q9P2H3 777 aaPredicted RBP14.57□□□□□ -0.08
SDC3-203ENST00000471567 GPN3Q9UHW5 284 aaPredicted RBP14.57□□□□□ -0.08
SDC3-203ENST00000471567 PADI2Q9Y2J8 665 aa14.57□□□□□ -0.08
SDC3-203ENST00000471567 TNPO3Q9Y5L0 923 aaKnown RBP14.57□□□□□ -0.08
SDC3-203ENST00000471567 MRPS18BQ9Y676 258 aaKnown RBP14.57□□□□□ -0.08
SDC3-203ENST00000471567 ZFHX4Q86UP3 3567 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 K7EPI3 171 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 NKX2-8O15522 239 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 P2RX6O15547 441 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 OR1F1O43749 312 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 CCNT2O60583 730 aaKnown RBP14.56□□□□□ -0.08
SDC3-203ENST00000471567 CDH16O75309 829 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 MED26O95402 600 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 ALBP02768 609 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 ITGAXP20702 1163 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 MEF2AQ02078 507 aaPredicted RBP14.56□□□□□ -0.08
SDC3-203ENST00000471567 PCDH1Q08174 1060 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 PWP1Q13610 501 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 PCBP2Q15366 365 aaKnown RBP eCLIP14.56□□□□□ -0.08
SDC3-203ENST00000471567 PFKFB4Q16877 469 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 FBXO48Q5FWF7 155 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 MLIPQ5VWP3 458 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 MRPL14Q6P1L8 145 aaKnown RBP14.56□□□□□ -0.08
SDC3-203ENST00000471567 OVCH1Q7RTY7 1134 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 MREGQ8N565 214 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 SNX31Q8N9S9 440 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 ZNF740Q8NDX6 193 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 WDR34Q96EX3 536 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 SEC16BQ96JE7 1060 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 RUFY1Q96T51 708 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 MRPL46Q9H2W6 279 aaKnown RBP14.56□□□□□ -0.08
SDC3-203ENST00000471567 ZNF304Q9HCX3 659 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 SLC22A11Q9NSA0 550 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 COPG2Q9UBF2 871 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 OPTCQ9UBM4 332 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 TBK1Q9UHD2 729 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 ZFP69BQ9UJL9 534 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 TCFL5Q9UL49 500 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 LAMA5O15230 3695 aa14.56□□□□□ -0.08
SDC3-203ENST00000471567 PRPF4O43172 522 aaKnown RBP eCLIP14.55□□□□□ -0.08
SDC3-203ENST00000471567 SMIM24O75264 130 aa14.55□□□□□ -0.08
SDC3-203ENST00000471567 ITGB2P05107 769 aa14.55□□□□□ -0.08
SDC3-203ENST00000471567 GSTA1P08263 222 aa14.55□□□□□ -0.08
SDC3-203ENST00000471567 SLC35G6P0C7Q6 338 aa14.55□□□□□ -0.08
SDC3-203ENST00000471567 VARSP26640 1264 aaKnown RBP14.55□□□□□ -0.08
SDC3-203ENST00000471567 GSTM2P28161 218 aa14.55□□□□□ -0.08
SDC3-203ENST00000471567 CASP2P42575 452 aa14.55□□□□□ -0.08
SDC3-203ENST00000471567 AGTR2P50052 363 aa14.55□□□□□ -0.08
SDC3-203ENST00000471567 CDC20Q12834 499 aa14.55□□□□□ -0.08
SDC3-203ENST00000471567 LAPTM5Q13571 262 aa14.55□□□□□ -0.08
SDC3-203ENST00000471567 E2F2Q14209 437 aa14.55□□□□□ -0.08
SDC3-203ENST00000471567 NAA30Q147X3 362 aaPredicted RBP14.55□□□□□ -0.08
SDC3-203ENST00000471567 TBCCQ15814 346 aa14.55□□□□□ -0.08
SDC3-203ENST00000471567 UGT8Q16880 541 aa14.55□□□□□ -0.08
SDC3-203ENST00000471567 TMEM214Q6NUQ4 689 aaKnown RBP14.55□□□□□ -0.08
SDC3-203ENST00000471567 KRT78Q8N1N4 520 aa14.55□□□□□ -0.08
SDC3-203ENST00000471567 RIBC1Q8N443 379 aaPredicted RBP14.55□□□□□ -0.08
SDC3-203ENST00000471567 TRPV3Q8NET8 790 aa14.55□□□□□ -0.08
SDC3-203ENST00000471567 TTLQ8NG68 377 aa14.55□□□□□ -0.08
SDC3-203ENST00000471567 NT5CQ8TCD5 201 aa14.55□□□□□ -0.08
SDC3-203ENST00000471567 PTCD3Q96EY7 689 aaKnown RBP14.55□□□□□ -0.08
SDC3-203ENST00000471567 EFCAB11Q9BUY7 163 aa14.55□□□□□ -0.08
SDC3-203ENST00000471567 DRC3Q9H069 523 aa14.55□□□□□ -0.08
SDC3-203ENST00000471567 SLC26A1Q9H2B4 701 aa14.55□□□□□ -0.08
SDC3-203ENST00000471567 SPNS1Q9H2V7 528 aa14.55□□□□□ -0.08
SDC3-203ENST00000471567 WDR54Q9H977 334 aa14.55□□□□□ -0.08
SDC3-203ENST00000471567 GEMIN8Q9NWZ8 242 aaKnown RBP14.55□□□□□ -0.08
SDC3-203ENST00000471567 CPSF2Q9P2I0 782 aaKnown RBP14.55□□□□□ -0.08
SDC3-203ENST00000471567 XPR1Q9UBH6 696 aa14.55□□□□□ -0.08
SDC3-203ENST00000471567 ASB1Q9Y576 335 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms