RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 OTOAQ7RTW8 1153 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 CCDC91Q7Z6B0 441 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 MSANTD4Q8NCY6 345 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 GRK7Q8WTQ7 553 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 CORO2AQ92828 525 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 SPSB1Q96BD6 273 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 ERO1AQ96HE7 468 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 CCDC114Q96M63 670 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 ZNF558Q96NG5 402 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 LRRC3BQ96PB8 259 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 MAP3K3Q99759 626 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 FERMT1Q9BQL6 677 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 PIGQQ9BRB3 760 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 PYGO2Q9BRQ0 406 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 MLPHQ9BV36 600 aaPredicted RBP3.34□□□□□ -1.87
BRCA2-202ENST00000470094 MRPL9Q9BYD2 267 aaKnown RBP3.34□□□□□ -1.87
BRCA2-202ENST00000470094 MED20Q9H944 212 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 COPS7BQ9H9Q2 264 aaPredicted RBP3.34□□□□□ -1.87
BRCA2-202ENST00000470094 TEX10Q9NXF1 929 aaPredicted RBP3.34□□□□□ -1.87
BRCA2-202ENST00000470094 MOB4Q9Y3A3 225 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 CSNK1G3Q9Y6M4 447 aa3.34□□□□□ -1.87
BRCA2-202ENST00000470094 A0A087WUV0 522 aaPredicted RBP3.33□□□□□ -1.88
BRCA2-202ENST00000470094 TRAV24A0A0B4J272 114 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 TRBV5-5A0A0J9YX44 114 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 MEX3AA1L020 520 aaKnown RBP3.33□□□□□ -1.88
BRCA2-202ENST00000470094 HTR3EA5X5Y0 456 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 TRIM64A6NGJ6 449 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 TRIM64BA6NI03 449 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 GOSR1O95249 250 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 ATP1B1P05026 303 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 MYL6BP14649 208 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 CASTP20810 708 aaKnown RBP3.33□□□□□ -1.88
BRCA2-202ENST00000470094 PTMSP20962 102 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 XGP55808 180 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 CSNK2BP67870 215 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 MZT1Q08AG7 82 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 SGCGQ13326 291 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 PPP2R5CQ13362 524 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 TRIM29Q14134 588 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 NONOQ15233 471 aaKnown RBP eCLIP3.33□□□□□ -1.88
BRCA2-202ENST00000470094 MTHFSDQ2M296 383 aaKnown RBP3.33□□□□□ -1.88
BRCA2-202ENST00000470094 GPR33Q49SQ1 333 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 TAF1BQ53T94 588 aaPredicted RBP3.33□□□□□ -1.88
BRCA2-202ENST00000470094 ODF2Q5BJF6 829 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 NOTUMQ6P988 496 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 KIF6Q6ZMV9 814 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 FCRLAQ7L513 359 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 LYG1Q8N1E2 194 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 NUP37Q8NFH4 326 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 FIBINQ8TAL6 211 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 METTL21AQ8WXB1 218 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 INTS14Q96SY0 518 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 DNAJC4Q9NNZ3 241 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 NUDT4Q9NZJ9 180 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 THEGQ9P2T0 379 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 IGSF1Q8N6C5 1336 aa3.33□□□□□ -1.88
BRCA2-202ENST00000470094 COL2A1P02458 1487 aaPredicted RBP3.33□□□□□ -1.88
BRCA2-202ENST00000470094 A4D1N5 150 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 FMO6PO60774 539 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 ATP6AP2O75787 350 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 GSRP00390 522 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 ADRA2CP18825 462 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 ZNF10P21506 573 aaPredicted RBP3.32□□□□□ -1.88
BRCA2-202ENST00000470094 TCF7P36402 384 aaPredicted RBP3.32□□□□□ -1.88
BRCA2-202ENST00000470094 HSD17B3P37058 310 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 CETN2P41208 172 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 TMEM50BP56557 158 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 CLDN15P56746 228 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 YWHAHQ04917 246 aaPredicted RBP3.32□□□□□ -1.88
BRCA2-202ENST00000470094 RASGEF1BQ0VAM2 473 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 ILF2Q12905 390 aaKnown RBP3.32□□□□□ -1.88
BRCA2-202ENST00000470094 CDH18Q13634 790 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 NFE2L1Q14494 772 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 OPCMLQ14982 345 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 MEP1BQ16820 701 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 NHSL2Q5HYW2 709 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 C6orf136Q5SQH8 315 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 CTR9Q6PD62 1173 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 MSANTD1Q6ZTZ1 278 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 SPATA19Q7Z5L4 167 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 CATSPERDQ86XM0 798 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 SIX6OS1Q8N1H7 587 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 CARNMT1Q8N4J0 409 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 CHCHD4Q8N4Q1 142 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 FAM89BQ8N5H3 189 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 NAT8LQ8N9F0 302 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 OR5T2Q8NGG2 359 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 FAM222BQ8WU58 562 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 PIK3R3Q92569 461 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 GTF3AQ92664 365 aaKnown RBP3.32□□□□□ -1.88
BRCA2-202ENST00000470094 EXT2Q93063 718 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 PTP4A1Q93096 173 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 TSACCQ96A04 125 aaPredicted RBP3.32□□□□□ -1.88
BRCA2-202ENST00000470094 ZNF300Q96RE9 604 aaPredicted RBP3.32□□□□□ -1.88
BRCA2-202ENST00000470094 EGFL8Q99944 293 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 LRRC61Q9BV99 259 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 TDRD1Q9BXT4 1180 aaKnown RBP3.32□□□□□ -1.88
BRCA2-202ENST00000470094 FZD8Q9H461 694 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 DBNDD1Q9H9R9 158 aa3.32□□□□□ -1.88
BRCA2-202ENST00000470094 LIPT1Q9Y234 373 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms