RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 SHANK1Q9Y566 2161 aa13.36□□□□□ -0.27
COMMD3-208ENST00000470045 A0A0A6YYC8 382 aaPredicted RBP13.35□□□□□ -0.27
COMMD3-208ENST00000470045 PABPN1LA6NDY0 278 aaKnown RBP13.35□□□□□ -0.27
COMMD3-208ENST00000470045 H0YIG0 161 aa13.35□□□□□ -0.27
COMMD3-208ENST00000470045 I3L1I5 382 aaPredicted RBP13.35□□□□□ -0.27
COMMD3-208ENST00000470045 CDC7O00311 574 aa13.35□□□□□ -0.27
COMMD3-208ENST00000470045 LCMT2O60294 686 aaKnown RBP13.35□□□□□ -0.27
COMMD3-208ENST00000470045 PIAS1O75925 651 aa13.35□□□□□ -0.27
COMMD3-208ENST00000470045 IPO13O94829 963 aaKnown RBP13.35□□□□□ -0.27
COMMD3-208ENST00000470045 NSA2O95478 260 aaKnown RBP13.35□□□□□ -0.27
COMMD3-208ENST00000470045 POU4F1Q01851 419 aa13.35□□□□□ -0.27
COMMD3-208ENST00000470045 RAPSNQ13702 412 aa13.35□□□□□ -0.27
COMMD3-208ENST00000470045 IGFBP7Q16270 282 aa13.35□□□□□ -0.27
COMMD3-208ENST00000470045 NDUFA9Q16795 377 aa13.35□□□□□ -0.27
COMMD3-208ENST00000470045 VWA2Q5GFL6 755 aa13.35□□□□□ -0.27
COMMD3-208ENST00000470045 ATG9BQ674R7 924 aa13.35□□□□□ -0.27
COMMD3-208ENST00000470045 SLC6A19Q695T7 634 aa13.35□□□□□ -0.27
COMMD3-208ENST00000470045 TMEM214Q6NUQ4 689 aaKnown RBP13.35□□□□□ -0.27
COMMD3-208ENST00000470045 JMJD6Q6NYC1 403 aaPredicted RBP13.35□□□□□ -0.27
COMMD3-208ENST00000470045 ZC3H7AQ8IWR0 971 aaKnown RBP13.35□□□□□ -0.27
COMMD3-208ENST00000470045 Q8NA96 180 aa13.35□□□□□ -0.27
COMMD3-208ENST00000470045 CDKL2Q92772 493 aa13.35□□□□□ -0.27
COMMD3-208ENST00000470045 MMABQ96EY8 250 aaPredicted RBP13.35□□□□□ -0.27
COMMD3-208ENST00000470045 VPS50Q96JG6 964 aa13.35□□□□□ -0.27
COMMD3-208ENST00000470045 GPR22Q99680 433 aa13.35□□□□□ -0.27
COMMD3-208ENST00000470045 RBBP8Q99708 897 aa13.35□□□□□ -0.27
COMMD3-208ENST00000470045 CPNE1Q99829 537 aa13.35□□□□□ -0.27
COMMD3-208ENST00000470045 MESP1Q9BRJ9 268 aa13.35□□□□□ -0.27
COMMD3-208ENST00000470045 TRPC4Q9UBN4 977 aa13.35□□□□□ -0.27
COMMD3-208ENST00000470045 C3orf18Q9UK00 162 aa13.35□□□□□ -0.27
COMMD3-208ENST00000470045 OARD1Q9Y530 152 aa13.35□□□□□ -0.27
COMMD3-208ENST00000470045 SETXQ7Z333 2677 aaKnown RBP13.34□□□□□ -0.27
COMMD3-208ENST00000470045 FEZF1A0PJY2 475 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 NPEPPSL1A6NEC2 478 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 IDSB3KWA1 339 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 FFAR3O14843 346 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 PCDH17O14917 1159 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 GPR42O15529 346 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 ALOX12BO75342 701 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 GUCA1CO95843 209 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 HPP00738 406 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 ALPPP05187 535 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 ANXA5P08758 320 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 SAT1P21673 171 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 GP5P40197 560 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 CCR8P51685 355 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 EFNA3P52797 238 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 PLTPP55058 493 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 MLLT10P55197 1068 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 CKAP4Q07065 602 aaKnown RBP13.34□□□□□ -0.27
COMMD3-208ENST00000470045 TRADDQ15628 312 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 ADAMTSL2Q86TH1 951 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 ASPGQ86U10 573 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 LAPTM4BQ86VI4 370 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 KLHDC8AQ8IYD2 350 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 PRSS58Q8IYP2 241 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 MFSD9Q8NBP5 474 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 CAMKVQ8NCB2 501 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 NEIL2Q969S2 332 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 PNPLA2Q96AD5 504 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 ALKBH8Q96BT7 664 aaKnown RBP13.34□□□□□ -0.27
COMMD3-208ENST00000470045 DERL2Q9GZP9 239 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 GPAMQ9HCL2 828 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 PLAAQ9Y263 795 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 MTO1Q9Y2Z2 717 aaKnown RBP13.34□□□□□ -0.27
COMMD3-208ENST00000470045 SCN3AQ9NY46 2000 aa13.34□□□□□ -0.27
COMMD3-208ENST00000470045 CPAMD8Q8IZJ3 1885 aa13.33□□□□□ -0.27
COMMD3-208ENST00000470045 FLNBO75369 2602 aaKnown RBP13.33□□□□□ -0.28
COMMD3-208ENST00000470045 TRBC2A0A5B9 178 aa13.33□□□□□ -0.28
COMMD3-208ENST00000470045 MAP2K7O14733 419 aa13.33□□□□□ -0.28
COMMD3-208ENST00000470045 STATHP02808 62 aa13.33□□□□□ -0.28
COMMD3-208ENST00000470045 CYC1P08574 325 aa13.33□□□□□ -0.28
COMMD3-208ENST00000470045 ACPPP15309 386 aa13.33□□□□□ -0.28
COMMD3-208ENST00000470045 GRK3P35626 688 aa13.33□□□□□ -0.28
COMMD3-208ENST00000470045 AVPR1BP47901 424 aa13.33□□□□□ -0.28
COMMD3-208ENST00000470045 GUCY2DQ02846 1103 aa13.33□□□□□ -0.28
COMMD3-208ENST00000470045 Q0VFX4 171 aa13.33□□□□□ -0.28
COMMD3-208ENST00000470045 TSNQ15631 228 aaKnown RBP13.33□□□□□ -0.28
COMMD3-208ENST00000470045 ZKSCAN8Q15776 578 aaPredicted RBP13.33□□□□□ -0.28
COMMD3-208ENST00000470045 SYT16Q17RD7 645 aa13.33□□□□□ -0.28
COMMD3-208ENST00000470045 CATSPEREQ5SY80 951 aa13.33□□□□□ -0.28
COMMD3-208ENST00000470045 IGFL2Q6UWQ7 119 aa13.33□□□□□ -0.28
COMMD3-208ENST00000470045 C3orf62Q6ZUJ4 267 aa13.33□□□□□ -0.28
COMMD3-208ENST00000470045 PRSS41Q7RTY9 318 aa13.33□□□□□ -0.28
COMMD3-208ENST00000470045 KCT2Q8NC54 265 aa13.33□□□□□ -0.28
COMMD3-208ENST00000470045 OR9A4Q8NGU2 314 aa13.33□□□□□ -0.28
COMMD3-208ENST00000470045 SLC5A11Q8WWX8 675 aa13.33□□□□□ -0.28
COMMD3-208ENST00000470045 TSPAN17Q96FV3 270 aa13.33□□□□□ -0.28
COMMD3-208ENST00000470045 C16orf45Q96MC5 204 aaPredicted RBP13.33□□□□□ -0.28
COMMD3-208ENST00000470045 MACROD1Q9BQ69 325 aa13.33□□□□□ -0.28
COMMD3-208ENST00000470045 SPNS1Q9H2V7 528 aa13.33□□□□□ -0.28
COMMD3-208ENST00000470045 LRRC4CQ9HCJ2 640 aa13.33□□□□□ -0.28
COMMD3-208ENST00000470045 CTNNAL1Q9UBT7 734 aa13.33□□□□□ -0.28
COMMD3-208ENST00000470045 SLC22A7Q9Y694 548 aa13.33□□□□□ -0.28
COMMD3-208ENST00000470045 LOC102723996A0A087X1L8 192 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 CLEC18AA5D8T8 446 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 TTLL8A6PVC2 850 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 BMP10O95393 424 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 SLC35G6P0C7Q6 338 aa13.32□□□□□ -0.28
COMMD3-208ENST00000470045 COX6A1P12074 109 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms