RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 SP5Q6BEB4 398 aaPredicted RBP12.56□□□□□ -0.4
CPSF4-210ENST00000469897 UGT3A1Q6NUS8 523 aa12.56□□□□□ -0.4
CPSF4-210ENST00000469897 HIBCHQ6NVY1 386 aaPredicted RBP12.56□□□□□ -0.4
CPSF4-210ENST00000469897 MBOAT1Q6ZNC8 495 aa12.56□□□□□ -0.4
CPSF4-210ENST00000469897 LANCL3Q6ZV70 420 aa12.56□□□□□ -0.4
CPSF4-210ENST00000469897 CPEB2Q7Z5Q1 589 aaKnown RBP12.56□□□□□ -0.4
CPSF4-210ENST00000469897 FJX1Q86VR8 437 aa12.56□□□□□ -0.4
CPSF4-210ENST00000469897 SLC26A11Q86WA9 606 aa12.56□□□□□ -0.4
CPSF4-210ENST00000469897 PALM2Q8IXS6 379 aa12.56□□□□□ -0.4
CPSF4-210ENST00000469897 KCT2Q8NC54 265 aa12.56□□□□□ -0.4
CPSF4-210ENST00000469897 C2CD4AQ8NCU7 369 aaPredicted RBP12.56□□□□□ -0.4
CPSF4-210ENST00000469897 SLC13A3Q8WWT9 602 aa12.56□□□□□ -0.4
CPSF4-210ENST00000469897 TM4SF19Q96DZ7 209 aa12.56□□□□□ -0.4
CPSF4-210ENST00000469897 NAP1L3Q99457 506 aaPredicted RBP12.56□□□□□ -0.4
CPSF4-210ENST00000469897 FAM167BQ9BTA0 163 aa12.56□□□□□ -0.4
CPSF4-210ENST00000469897 TUBB6Q9BUF5 446 aa12.56□□□□□ -0.4
CPSF4-210ENST00000469897 PARVBQ9HBI1 364 aa12.56□□□□□ -0.4
CPSF4-210ENST00000469897 SHANK1Q9Y566 2161 aa12.56□□□□□ -0.4
CPSF4-210ENST00000469897 PIKFYVEQ9Y2I7 2098 aa12.55□□□□□ -0.4
CPSF4-210ENST00000469897 A0A1B0GUH1 482 aa12.55□□□□□ -0.4
CPSF4-210ENST00000469897 PGRMC1O00264 195 aaKnown RBP12.55□□□□□ -0.4
CPSF4-210ENST00000469897 EIF3FO00303 357 aaPredicted RBP12.55□□□□□ -0.4
CPSF4-210ENST00000469897 BANF1O75531 89 aa12.55□□□□□ -0.4
CPSF4-210ENST00000469897 WISP2O76076 250 aa12.55□□□□□ -0.4
CPSF4-210ENST00000469897 RASAL1O95294 804 aa12.55□□□□□ -0.4
CPSF4-210ENST00000469897 PGAM1P18669 254 aa12.55□□□□□ -0.4
CPSF4-210ENST00000469897 XCR1P46094 333 aa12.55□□□□□ -0.4
CPSF4-210ENST00000469897 RGS4P49798 205 aa12.55□□□□□ -0.4
CPSF4-210ENST00000469897 ST13P50502 369 aaKnown RBP12.55□□□□□ -0.4
CPSF4-210ENST00000469897 PGGT1BP53609 377 aa12.55□□□□□ -0.4
CPSF4-210ENST00000469897 CDKN2DP55273 166 aa12.55□□□□□ -0.4
CPSF4-210ENST00000469897 PER3P56645 1201 aa12.55□□□□□ -0.4
CPSF4-210ENST00000469897 DHX9Q08211 1270 aaKnown RBP12.55□□□□□ -0.4
CPSF4-210ENST00000469897 ZXDCQ2QGD7 858 aaPredicted RBP12.55□□□□□ -0.4
CPSF4-210ENST00000469897 BTBD16Q32M84 506 aa12.55□□□□□ -0.4
CPSF4-210ENST00000469897 RBM20Q5T481 1227 aaKnown RBP12.55□□□□□ -0.4
CPSF4-210ENST00000469897 RNASEH2BQ5TBB1 312 aaKnown RBP12.55□□□□□ -0.4
CPSF4-210ENST00000469897 FCRLBQ6BAA4 426 aa12.55□□□□□ -0.4
CPSF4-210ENST00000469897 CAPN13Q6MZZ7 669 aaPredicted RBP12.55□□□□□ -0.4
CPSF4-210ENST00000469897 TMEM214Q6NUQ4 689 aaKnown RBP12.55□□□□□ -0.4
CPSF4-210ENST00000469897 C17orf64Q86WR6 236 aa12.55□□□□□ -0.4
CPSF4-210ENST00000469897 MYO1HQ8N1T3 1032 aa12.55□□□□□ -0.4
CPSF4-210ENST00000469897 CAMKVQ8NCB2 501 aa12.55□□□□□ -0.4
CPSF4-210ENST00000469897 SUN3Q8TAQ9 357 aa12.55□□□□□ -0.4
CPSF4-210ENST00000469897 ZCCHC10Q8TBK6 192 aa12.55□□□□□ -0.4
CPSF4-210ENST00000469897 ACTRT1Q8TDG2 376 aa12.55□□□□□ -0.4
CPSF4-210ENST00000469897 THAP11Q96EK4 314 aa12.55□□□□□ -0.4
CPSF4-210ENST00000469897 OSBPL9Q96SU4 736 aa12.55□□□□□ -0.4
CPSF4-210ENST00000469897 PCBD2Q9H0N5 130 aa12.55□□□□□ -0.4
CPSF4-210ENST00000469897 ANKHQ9HCJ1 492 aa12.55□□□□□ -0.4
CPSF4-210ENST00000469897 TAS2R13Q9NYV9 303 aa12.55□□□□□ -0.4
CPSF4-210ENST00000469897 SEC16AO15027 2179 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 OR5H15A6NDH6 313 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 SLC16A5O15375 505 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 NRDCO43847 1150 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 PRAMEF2O60811 474 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 DNAJB6O75190 326 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 UNC5CO95185 931 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 C8GP07360 202 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 HIST1H2AGP0C0S8 130 aaPredicted RBP12.54□□□□□ -0.4
CPSF4-210ENST00000469897 CDH1P12830 882 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 HIST1H2ADP20671 130 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 MST1P26927 711 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 TDGF1P3P51864 188 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 AP2B1P63010 937 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 MEF2AQ02078 507 aaPredicted RBP12.54□□□□□ -0.4
CPSF4-210ENST00000469897 CRYMQ14894 314 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 PPP1R7Q15435 360 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 PHKG1Q16816 387 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 MSS51Q4VC12 460 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 HP1BP3Q5SSJ5 553 aaPredicted RBP12.54□□□□□ -0.4
CPSF4-210ENST00000469897 GFRALQ6UXV0 394 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 ANKRD37Q7Z713 158 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 ASPGQ86U10 573 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 PDSS2Q86YH6 399 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 IGDCC3Q8IVU1 814 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 SLC35F6Q8N357 371 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 GRK7Q8WTQ7 553 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 NR4A3Q92570 626 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 RELTQ969Z4 430 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 PYCR2Q96C36 320 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 MOCOSQ96EN8 888 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 HIST1H2AHQ96KK5 128 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 HIST1H2AJQ99878 128 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 H2AFJQ9BTM1 129 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 NAALAD2Q9Y3Q0 740 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 TEX15Q9BXT5 2789 aa12.54□□□□□ -0.4
CPSF4-210ENST00000469897 PRRC2CQ9Y520 2896 aaKnown RBP12.53□□□□□ -0.4
CPSF4-210ENST00000469897 TRGV8A0A0C4DH27 118 aa12.53□□□□□ -0.4
CPSF4-210ENST00000469897 OR1F1O43749 312 aa12.53□□□□□ -0.4
CPSF4-210ENST00000469897 RDH16O75452 317 aa12.53□□□□□ -0.4
CPSF4-210ENST00000469897 MYBL2P10244 700 aa12.53□□□□□ -0.4
CPSF4-210ENST00000469897 GRK3P35626 688 aa12.53□□□□□ -0.4
CPSF4-210ENST00000469897 FNTAP49354 379 aa12.53□□□□□ -0.4
CPSF4-210ENST00000469897 SPANXN3Q5MJ09 141 aa12.53□□□□□ -0.4
CPSF4-210ENST00000469897 PLAG1Q6DJT9 500 aa12.53□□□□□ -0.4
CPSF4-210ENST00000469897 LRRC8EQ6NSJ5 796 aa12.53□□□□□ -0.4
CPSF4-210ENST00000469897 H3F3CQ6NXT2 135 aa12.53□□□□□ -0.4
CPSF4-210ENST00000469897 LCTLQ6UWM7 567 aa12.53□□□□□ -0.4
CPSF4-210ENST00000469897 TMEM207Q6UWW9 146 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms